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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100337g3.998.mrna |
| Orig protein id | gnl|cribi|Naga_100337g3.998 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:78126..80157 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8486 ID=rna8486|Name=rna8486|organism=Nannochloropsis gaditana|type=mRNA|length=756bp
ATGCCATTCAGGCATGCAGGGCGACCGCATTCTTGTTCATGCGACAGACA
CTTCGCTTCTCGTTGGTATACTCCCCCATACCCTTTTTTCCCGTTCGGCC
ATAAACCTCCTGCCCCTCCTTTTCCTTTCCCAGAATTACTCCCGCGGGCT
CCACCTTTGCCTTCATCCTCCAGAGAGGTAAACCCCTCCGAGACGATTCA
CGTTGCCTCCCCCTGCCAGTCAGGCTGTCAGGGTCAAGAGGCGGCCCAGC
AAGCTTGGCAAGAAGGGGATCACCGGGGGGAAAGGCAAGGCTCTGGCCCA
ACCGAGGACAGGAGGAGAGGGCAGCGGCGCCTTGGGGACGGGGCAAGTGG
ATGTATCTACTACCAAGAAGAAGAGCTTCTCGTCCTGTCGCCTGAGTGGG
CGCGTCACTTTCGAGAACGTTTTCGAGCCTGCAAGGCAGGGGCGAAACGG
GGAAAACGCACGCGGGAGATCGTCCAGTGGTCACACCGGGAAGTCGACGC
CCTCCCTCCCCCCACGGCACGGGCTCTGGGAAAGCGAGCCTTCTCAAAGC
GGAATGGGCATGTGGGCAGGGAGGAGGGGGAGGAGGACGAGGCGGACGAG
AGGAGGGAGGAGGAGGAGGAGGAGCAAGCAGCCATCGGGGCCGACGGGGA
AAGGAGGAAGGCACTGAGGTTGGAAAAGCTACCTCCCTGTTTGAGGGAAA
GCGTGATGGGGTTCATGGAAGAAGATGATGACGTGCAAGGGGGGAAGAAG
GGGTGA back to topprotein sequence of rna8486 >rna8486-protein ID=rna8486-protein|Name=rna8486|organism=Nannochloropsis gaditana|type=polypeptide|length=420bp
MEGLLHYLEEEEEEKDKEDKEDKEVSNKPEKGSDGSNEAAKPSGLPRSAS
TMEDNRGSLLPTAYTSFDKRLRLPRLTSPQKRPREGKGKNEGPRKGKRKV
KHVRWADAALLEEVFPFFMDSPVDPFAPRGASEPLSSSSASPVHPGEQEG
FNPSMQALVAHPTSPSMGAGTPTLDGEARTGEEVGGENGAGFRHASWQTV
SVVTRRKDMPSSSPPLQGRWAHPLPSSSPAPDPARRENVRAKEDQEESSA
FEFFCDACLYTLEEDEVRYECQVCPGEFCLCRTCYAKQFQPSPSTLSSTQ
ATTRVGPHPHPCLPNTSKVHITSIPKGLEKGKEHEEQPWNEYSATVEVGN
IKEKEASGFVKEGERDRDKQSNQDDSIRMREGEATDTGYAGGEEEDEEGG
LLLGPGGGPRFGNLKYTGSL back to topmRNA from alignment at KK037249.1:78126..80157+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8486 ID=rna8486|Name=rna8486|organism=Nannochloropsis gaditana|type=mRNA|length=2032bp|location=Sequence derived from alignment at KK037249.1:78126..80157+ (Nannochloropsis gaditana)
TGTTGAAACATTCTCAAAAAATAGAAAATATGCCCTTTATTTATCATCCA
TTTGTGCAGACGAGGCAGTAGGCGAGGTAGCCAGGAGGTTTTGGCTATCC
CTTTTCCAGCCCCCCCAAACGACTGCCTTTGACTGCCCAATGCATACCCA
CAGTTACTGTCGTGAGACTGTGCAGCATACGTTCGTCACAATTAATGGGG
CCTGTGGAGTCTTTGTCATTCTGAGGCGGGCTAGGCTTGTCACGGGGATT
TGGCAGGCAGAGAGCACACATGTCGTAGCCGCGACAAACGCCGCGGAGGC
AGACGTTGGAAGACAGTATGGAGGTAAGTCCATGAAAGAGTTCATGCGAT
GTCCACTCTCTTTGTGTTTTCACACACCTTTTATTTGGCCTCCTGTCTCA
CATGTGTGTCCCGATCTCCTGTGACAGGGTCTGTTGCACTatcttgaaga
ggaggaggaggagaaggacaaggaggacaaggaggacaaggaggtaTCAA
ATAAGCCGGAAAAGGGTAGTGATGGATCGAATGAAGCCGCAAAACCTTCC
GGGTTGCCGAGATCGGCATCCACCATGGAGGATAATCGTGGATCTCTACT
CCCTACGGCCTACACCAGCTTCGATAAGCGACTGCGGCTTCCCCGGCTAA
CATCCCCCCAAAAACGTCCccgtgagggaaaggggaagaatgagggccca
agaaagggaaagaggaaggtgaagCACGTGCGATGGGCGGATGCCGCTTT
GCTAGAAGAagtcttccctttcttcatgGACAGCCCCGTCGGTAAGCTta
tgggagggggtggaatagacggcggaggaaagaaggaacgAGAGTTGACG
AAGAGAGGACTTGTGAATTCCATGGCAATACTTGGAGAAGTTGGTAGCTC
CGTTCATATTTGAGGAGCacgtttccccttcccgttccCGCAGATCCCTT
TGCTCCTCGTGGAGCCAGCGAGCCCTTgtcatcttcctccgcctcaccGG
TCCATCCAGGCGAGCAGGAAGGATTCAATCCTTCGATGCAAGCGTTGGTA
GCACACCCTACATCACCGTCCATGGGGGCTGGGACGCCCACACTCGATGG
GGAGGCACGTACGGGGGAAGAGGTCGGAGGAGAGAATGGCGCGGGGTTCA
GACACGCCTCCTGGCAGACCGTTTCTGTGGTCACTCGGAGGAAAGAcatg
ccttcctcttcgccgcccttgcaagggaggtgggcccaccccttgccctc
ttcctcccccgctcctgACCCCGCCCGGCGGGAGAACGTCCGTGCcaagg
aggaccaggaggagagcTCGGCATTCGAGTTCTTTTGTGACGCGTGCCTG
TACAcgctggaggaagatgaagtaCGGTACGTGACCGGTGTGGCTTCGCG
CAGGACATGGGCCTGGATGCCCTCCACTTACAAAGCCAATCAATCCTCCC
ATCGGCCATCCTTCTGTCCATCATCCCATGATTAGATACGAATGCCAAGT
GTGCCCGGGGGAGTTCTGCCTGTGCCGCACTTGTTACGCCAAGCAATTTC
AACCATCGCCTTCCACACTTTCATCCACGCAAGCGACAACGCGCGTCGGC
CCACACCCTCACCCTTGCCTGCCCAACACTAGCAAGGTCCACATCACTTC
GATACCCAAGGGCcttgagaaaggaaaggagcatgAAGAGCAGCCCTGGA
ATGAATACAGTGCAACTGTAGAGGTTGGAAACataaaggaaaaggaagct
aGCGGCTTtgtgaaagagggagagcgagacAGAGATAAGCAAAGCAATCA
GGATGATAGCATacggatgagggagggggaggcaacAGACACAGGATAtg
ctgggggagaggaagaggacgaagaggggggactTTTGCTAGGTCCGGGA
GGGGGCCCACGCTTTGGCAACTTAAAGTACACAGGTTCTCTGTAAGACAA
TAGTTTAGGTTGAGAAGAGTCGATGATTTATGGCTTTGACAGAAAAAAAT
CTTAATTTGAAGAACTTCTCTTGGTTTCATGA back to topCoding sequence (CDS) from alignment at KK037249.1:78126..80157+ >rna8486 ID=rna8486|Name=rna8486|organism=Nannochloropsis gaditana|type=CDS|length=5052bp|location=Sequence derived from alignment at KK037249.1:78126..80157+ (Nannochloropsis gaditana)
ATGGAGGGTCTGTTGCACTatcttgaagaggaggaggaggagaaggacaa
ggaggacaaggaggacaaggaggtaTCAAATAAGCCGGAAAAGGGTAGTG
ATGGATCGAATGAAGCCGCAAAACCTTCCGGGTTGCCGAGATCGGCATCC
ACCATGGAGGATAATCGTGGATCTCTACTCCCTACGGCCTACACCAGCTT
CGATAAGCGACTGCGGCTTCCCCGGCTAACATCCCCCCAAAAACGTCCcc
gtgagggaaaggggaagaatgagggcccaagaaagggaaagaggaaggtg
aagCACGTGCGATGGGCGGATGCCGCTTTGCTAGAAGAagtcttcccttt
cttcatgGACAGCCCCGTCGATCCCTTTGCTCCTCGTGGAGCCAGCGAGC
CCTTgtcatcttcctccgcctcaccGGTCCATCCAGGCGAGCAGGAAGGA
TTCAATCCTTCGATGCAAGCGTTGGTAGCACACCCTACATCACCGTCCAT
GGGGGCTGGGACGCCCACACTCGATGGGGAGGCACGTACGGGGGAAGAGG
TCGGAGGAGAGAATGGCGCGGGGTTCAGACACGCCTCCTGGCAGACCGTT
TCTGTGGTCACTCGGAGGAAAGAcatgccttcctcttcgccgcccttgca
agggaggtgggcccaccccttgccctcttcctcccccgctcctgACCCCG
CCCGGCGGGAGAACGTCCGTGCcaaggaggaccaggaggagagcTCGGCA
TTCGAGTTCTTTTGTGACGCGTGCCTGTACAcgctggaggaagatgaagt
aCGATACGAATGCCAAGTGTGCCCGGGGGAGTTCTGCCTGTGCCGCACTT
GTTACGCCAAGCAATTTCAACCATCGCCTTCCACACTTTCATCCACGCAA
GCGACAACGCGCGTCGGCCCACACCCTCACCCTTGCCTGCCCAACACTAG
CAAGGTCCACATCACTTCGATACCCAAGGGCcttgagaaaggaaaggagc
atgAAGAGCAGCCCTGGAATGAATACAGTGCAACTGTAGAGGTTGGAAAC
ataaaggaaaaggaagctaGCGGCTTtgtgaaagagggagagcgagacAG
AGATAAGCAAAGCAATCAGGATGATAGCATacggatgagggagggggagg
caacAGACACAGGATAtgctgggggagaggaagaggacgaagagggggga
ctTTTGCTAGGTCCGGGAGGGGGCCCACGCTTTGGCAACTTAAAGTACAC
AGGTTCTCTGTAAATGGAGGGTCTGTTGCACTatcttgaagaggaggagg
aggagaaggacaaggaggacaaggaggacaaggaggtaTCAAATAAGCCG
GAAAAGGGTAGTGATGGATCGAATGAAGCCGCAAAACCTTCCGGGTTGCC
GAGATCGGCATCCACCATGGAGGATAATCGTGGATCTCTACTCCCTACGG
CCTACACCAGCTTCGATAAGCGACTGCGGCTTCCCCGGCTAACATCCCCC
CAAAAACGTCCccgtgagggaaaggggaagaatgagggcccaagaaaggg
aaagaggaaggtgaagCACGTGCGATGGGCGGATGCCGCTTTGCTAGAAG
AagtcttccctttcttcatgGACAGCCCCGTCGATCCCTTTGCTCCTCGT
GGAGCCAGCGAGCCCTTgtcatcttcctccgcctcaccGGTCCATCCAGG
CGAGCAGGAAGGATTCAATCCTTCGATGCAAGCGTTGGTAGCACACCCTA
CATCACCGTCCATGGGGGCTGGGACGCCCACACTCGATGGGGAGGCACGT
ACGGGGGAAGAGGTCGGAGGAGAGAATGGCGCGGGGTTCAGACACGCCTC
CTGGCAGACCGTTTCTGTGGTCACTCGGAGGAAAGAcatgccttcctctt
cgccgcccttgcaagggaggtgggcccaccccttgccctcttcctccccc
gctcctgACCCCGCCCGGCGGGAGAACGTCCGTGCcaaggaggaccagga
ggagagcTCGGCATTCGAGTTCTTTTGTGACGCGTGCCTGTACAcgctgg
aggaagatgaagtaCGATACGAATGCCAAGTGTGCCCGGGGGAGTTCTGC
CTGTGCCGCACTTGTTACGCCAAGCAATTTCAACCATCGCCTTCCACACT
TTCATCCACGCAAGCGACAACGCGCGTCGGCCCACACCCTCACCCTTGCC
TGCCCAACACTAGCAAGGTCCACATCACTTCGATACCCAAGGGCcttgag
aaaggaaaggagcatgAAGAGCAGCCCTGGAATGAATACAGTGCAACTGT
AGAGGTTGGAAACataaaggaaaaggaagctaGCGGCTTtgtgaaagagg
gagagcgagacAGAGATAAGCAAAGCAATCAGGATGATAGCATacggatg
agggagggggaggcaacAGACACAGGATAtgctgggggagaggaagagga
cgaagaggggggactTTTGCTAGGTCCGGGAGGGGGCCCACGCTTTGGCA
ACTTAAAGTACACAGGTTCTCTGTAAATGGAGGGTCTGTTGCACTatctt
gaagaggaggaggaggagaaggacaaggaggacaaggaggacaaggaggt
aTCAAATAAGCCGGAAAAGGGTAGTGATGGATCGAATGAAGCCGCAAAAC
CTTCCGGGTTGCCGAGATCGGCATCCACCATGGAGGATAATCGTGGATCT
CTACTCCCTACGGCCTACACCAGCTTCGATAAGCGACTGCGGCTTCCCCG
GCTAACATCCCCCCAAAAACGTCCccgtgagggaaaggggaagaatgagg
gcccaagaaagggaaagaggaaggtgaagCACGTGCGATGGGCGGATGCC
GCTTTGCTAGAAGAagtcttccctttcttcatgGACAGCCCCGTCGATCC
CTTTGCTCCTCGTGGAGCCAGCGAGCCCTTgtcatcttcctccgcctcac
cGGTCCATCCAGGCGAGCAGGAAGGATTCAATCCTTCGATGCAAGCGTTG
GTAGCACACCCTACATCACCGTCCATGGGGGCTGGGACGCCCACACTCGA
TGGGGAGGCACGTACGGGGGAAGAGGTCGGAGGAGAGAATGGCGCGGGGT
TCAGACACGCCTCCTGGCAGACCGTTTCTGTGGTCACTCGGAGGAAAGAc
atgccttcctcttcgccgcccttgcaagggaggtgggcccaccccttgcc
ctcttcctcccccgctcctgACCCCGCCCGGCGGGAGAACGTCCGTGCca
aggaggaccaggaggagagcTCGGCATTCGAGTTCTTTTGTGACGCGTGC
CTGTACAcgctggaggaagatgaagtaCGATACGAATGCCAAGTGTGCCC
GGGGGAGTTCTGCCTGTGCCGCACTTGTTACGCCAAGCAATTTCAACCAT
CGCCTTCCACACTTTCATCCACGCAAGCGACAACGCGCGTCGGCCCACAC
CCTCACCCTTGCCTGCCCAACACTAGCAAGGTCCACATCACTTCGATACC
CAAGGGCcttgagaaaggaaaggagcatgAAGAGCAGCCCTGGAATGAAT
ACAGTGCAACTGTAGAGGTTGGAAACataaaggaaaaggaagctaGCGGC
TTtgtgaaagagggagagcgagacAGAGATAAGCAAAGCAATCAGGATGA
TAGCATacggatgagggagggggaggcaacAGACACAGGATAtgctgggg
gagaggaagaggacgaagaggggggactTTTGCTAGGTCCGGGAGGGGGC
CCACGCTTTGGCAACTTAAAGTACACAGGTTCTCTGTAAATGGAGGGTCT
GTTGCACTatcttgaagaggaggaggaggagaaggacaaggaggacaagg
aggacaaggaggtaTCAAATAAGCCGGAAAAGGGTAGTGATGGATCGAAT
GAAGCCGCAAAACCTTCCGGGTTGCCGAGATCGGCATCCACCATGGAGGA
TAATCGTGGATCTCTACTCCCTACGGCCTACACCAGCTTCGATAAGCGAC
TGCGGCTTCCCCGGCTAACATCCCCCCAAAAACGTCCccgtgagggaaag
gggaagaatgagggcccaagaaagggaaagaggaaggtgaagCACGTGCG
ATGGGCGGATGCCGCTTTGCTAGAAGAagtcttccctttcttcatgGACA
GCCCCGTCGATCCCTTTGCTCCTCGTGGAGCCAGCGAGCCCTTgtcatct
tcctccgcctcaccGGTCCATCCAGGCGAGCAGGAAGGATTCAATCCTTC
GATGCAAGCGTTGGTAGCACACCCTACATCACCGTCCATGGGGGCTGGGA
CGCCCACACTCGATGGGGAGGCACGTACGGGGGAAGAGGTCGGAGGAGAG
AATGGCGCGGGGTTCAGACACGCCTCCTGGCAGACCGTTTCTGTGGTCAC
TCGGAGGAAAGAcatgccttcctcttcgccgcccttgcaagggaggtggg
cccaccccttgccctcttcctcccccgctcctgACCCCGCCCGGCGGGAG
AACGTCCGTGCcaaggaggaccaggaggagagcTCGGCATTCGAGTTCTT
TTGTGACGCGTGCCTGTACAcgctggaggaagatgaagtaCGATACGAAT
GCCAAGTGTGCCCGGGGGAGTTCTGCCTGTGCCGCACTTGTTACGCCAAG
CAATTTCAACCATCGCCTTCCACACTTTCATCCACGCAAGCGACAACGCG
CGTCGGCCCACACCCTCACCCTTGCCTGCCCAACACTAGCAAGGTCCACA
TCACTTCGATACCCAAGGGCcttgagaaaggaaaggagcatgAAGAGCAG
CCCTGGAATGAATACAGTGCAACTGTAGAGGTTGGAAACataaaggaaaa
ggaagctaGCGGCTTtgtgaaagagggagagcgagacAGAGATAAGCAAA
GCAATCAGGATGATAGCATacggatgagggagggggaggcaacAGACACA
GGATAtgctgggggagaggaagaggacgaagaggggggactTTTGCTAGG
TCCGGGAGGGGGCCCACGCTTTGGCAACTTAAAGTACACAGGTTCTCTGT
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