EWM22216.1, cds8459 (CDS) Nannochloropsis gaditana

Overview
NameEWM22216.1
Unique Namecds8459
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:78443..78448 +
Alignment locationKK037249.1:78553..78916 +
Alignment locationKK037249.1:79069..79501 +
Alignment locationKK037249.1:79611..80070 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22216.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100337g3.998.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:78443..78448 +
KK037249.1supercontigKK037249.1:78553..78916 +
KK037249.1supercontigKK037249.1:79069..79501 +
KK037249.1supercontigKK037249.1:79611..80070 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22216.1 vs. NCBI_GenBank
Match: gi|585102664|gb|EWM22216.1| (hypothetical protein Naga_100337g3 [Nannochloropsis gaditana])

HSP 1 Score: 859.366 bits (2219), Expect = 0.000e+0
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0 
Query:    1 MEGLLHYLEEEEEEKDKEDKEDKEVSNKPEKGSDGSNEAAKPSGLPRSASTMEDNRGSLLPTAYTSFDKRLRLPRLTSPQKRPREGKGKNEGPRKGKRKVKHVRWADAALLEEVFPFFMDSPVDPFAPRGASEPLSSSSASPVHPGEQEGFNPSMQALVAHPTSPSMGAGTPTLDGEARTGEEVGGENGAGFRHASWQTVSVVTRRKDMPSSSPPLQGRWAHPLPSSSPAPDPARRENVRAKEDQEESSAFEFFCDACLYTLEEDEVRYECQVCPGEFCLCRTCYAKQFQPSPSTLSSTQATTRVGPHPHPCLPNTSKVHITSIPKGLEKGKEHEEQPWNEYSATVEVGNIKEKEASGFVKEGERDRDKQSNQDDSIRMREGEATDTGYAGGEEEDEEGGLLLGPGGGPRFGNLKYTGSL 420
            MEGLLHYLEEEEEEKDKEDKEDKEVSNKPEKGSDGSNEAAKPSGLPRSASTMEDNRGSLLPTAYTSFDKRLRLPRLTSPQKRPREGKGKNEGPRKGKRKVKHVRWADAALLEEVFPFFMDSPVDPFAPRGASEPLSSSSASPVHPGEQEGFNPSMQALVAHPTSPSMGAGTPTLDGEARTGEEVGGENGAGFRHASWQTVSVVTRRKDMPSSSPPLQGRWAHPLPSSSPAPDPARRENVRAKEDQEESSAFEFFCDACLYTLEEDEVRYECQVCPGEFCLCRTCYAKQFQPSPSTLSSTQATTRVGPHPHPCLPNTSKVHITSIPKGLEKGKEHEEQPWNEYSATVEVGNIKEKEASGFVKEGERDRDKQSNQDDSIRMREGEATDTGYAGGEEEDEEGGLLLGPGGGPRFGNLKYTGSL
Sbjct:    1 MEGLLHYLEEEEEEKDKEDKEDKEVSNKPEKGSDGSNEAAKPSGLPRSASTMEDNRGSLLPTAYTSFDKRLRLPRLTSPQKRPREGKGKNEGPRKGKRKVKHVRWADAALLEEVFPFFMDSPVDPFAPRGASEPLSSSSASPVHPGEQEGFNPSMQALVAHPTSPSMGAGTPTLDGEARTGEEVGGENGAGFRHASWQTVSVVTRRKDMPSSSPPLQGRWAHPLPSSSPAPDPARRENVRAKEDQEESSAFEFFCDACLYTLEEDEVRYECQVCPGEFCLCRTCYAKQFQPSPSTLSSTQATTRVGPHPHPCLPNTSKVHITSIPKGLEKGKEHEEQPWNEYSATVEVGNIKEKEASGFVKEGERDRDKQSNQDDSIRMREGEATDTGYAGGEEEDEEGGLLLGPGGGPRFGNLKYTGSL 420
[Close]
BLAST of EWM22216.1 vs. NCBI_GenBank
Match: gi|553183654|ref|XP_005853937.1| (hypothetical protein NGA_0461400 [Nannochloropsis gaditana CCMP526] >gi|422295127|gb|EKU22426.1| hypothetical protein NGA_0461400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0
Identity = 267/269 (99.26%), Postives = 268/269 (99.63%), Query Frame = 0 
Query:    1 MEGLLHYLEEEEEEKDKEDKEDKEVSNKPEKGSDGSNEAAKPSGLPRSASTMEDNRGSLLPTAYTSFDKRLRLPRLTSPQKRPREGKGKNEGPRKGKRKVKHVRWADAALLEEVFPFFMDSPVDPFAPRGASEPLSSSSASPVHPGEQEGFNPSMQALVAHPTSPSMGAGTPTLDGEARTGEEVGGENGAGFRHASWQTVSVVTRRKDMPSSSPPLQGRWAHPLPSSSPAPDPARRENVRAKEDQEESSAFEFFCDACLYTLEEDEVRY 269
            MEGLLHYLEEEEEEKDKEDKEDKEVSNKPEKGSDGSNEAAKPSGLPRSASTMEDNRGSLLPTAYTSFDKRLRLPRLTSPQKRPREGKGKNEGPRKGKRKVKHVRWADAALLEEVFPFFMDSPVDPFAPRGASEPLSSSSASPVHPGEQEGFNPSMQALVAHPTSPSMGAGTPTLDGEARTGEEVGGENGAGFRHASWQTVSVVTRRKDMPSSSPPLQGRWAHPLPSSSPAPDPARRENVRAKEDQEESSAFEFFCDACLYTLEEDE+R 
Sbjct:    1 MEGLLHYLEEEEEEKDKEDKEDKEVSNKPEKGSDGSNEAAKPSGLPRSASTMEDNRGSLLPTAYTSFDKRLRLPRLTSPQKRPREGKGKNEGPRKGKRKVKHVRWADAALLEEVFPFFMDSPVDPFAPRGASEPLSSSSASPVHPGEQEGFNPSMQALVAHPTSPSMGAGTPTLDGEARTGEEVGGENGAGFRHASWQTVSVVTRRKDMPSSSPPLQGRWAHPLPSSSPAPDPARRENVRAKEDQEESSAFEFFCDACLYTLEEDEIRM 269
The following BLAST results are available for this feature:
BLAST of EWM22216.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102664|gb|EWM22216.1|0.000e+0100.00hypothetical protein Naga_100337g3 [Nannochloropsi... [more]
gi|553183654|ref|XP_005853937.1|0.000e+099.26hypothetical protein NGA_0461400 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8486rna8486Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications