rna8477, rna8477 (mRNA) Nannochloropsis gaditana

Overview
Namerna8477
Unique Namerna8477
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1751
Alignment locationKK037249.1:57265..58947 +

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Properties
Property NameValue
Productarsenate reductase
Orig transcript idgnl|cribi|Naga_100312g9.9864.mrna
Orig protein idgnl|cribi|Naga_100312g9.9864
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:57265..58947 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100312g9gene8218Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8477rna8477-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22228.1cds8450Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8477 ID=rna8477|Name=rna8477|organism=Nannochloropsis gaditana|type=mRNA|length=1751bp
TGCATGCATGATTGTCGTAGATCAAACCCTATGTGTAGCGCATACTCTGT
AGTACGCGTAAGACCTCCCCGGTCTCAACAACCCGTCTGCTGAACGAAAG
CGAGGATCCCCTTCGTGTCCTCCATCACGTGTTATTGAACAATGCAAGGC
TCAACATTATGGAAAATGCTCACCATCTTTTCTTCTCAGCCATTCGCAGC
ATGTCCGGGCCCTCCTCACAAGAGTCGAAGGTCCAGGCGGTGGAAAGCAC
GCAATTCAACCACTCTCACCCTGAGGAGGAGAAAAAGCTATCTTTCTTGG
ACAAATTCCTTTCTGGATGGATCATCCTAGCTGCTGGTGTGGGACTGGCG
CTTGGACAGGCTCCTGCCATCATCAAGGCGATCAAAGCATCGAGCGTAGG
GACCACCAATATTCCTATAGCCATCGGATTAATCCTCATGATATTTCCTC
CTCTGGCTAAGGTTCGCTGGAACAAGATGCGCGACGTCTTTGCCGATACT
CATTTGGTCCTCTTGACCCTGTTTCTGAACTGGGTAGTGGGGCCGTTCTT
GATGTATTTTTTGGCCGTCGCATTCTTCCACGAAGGAAGGTACGCCTCCT
TCATGTCGGGCCTCTCCCTTGTGGGTTGCGCCCGTTGTATCGCCATGGTG
ATCGTGTGGGTGGAGCTGGCTAGGGGCGATCGCGAGTATTGCGCGGCCAT
CGTTGCCCTCAACAGCATCATCACCATCTTTCTCTATTCCCCGTACGCGG
TGCTTTTCCTTATCACGTTGCCCACGGCCATGCTGGGCTCGGCGGGCACG
AGTGCCGTGGACGTGACCATGGGGGACATTGCCATCTCTGTGGGAATCTA
CCTGGGCATTCCACTCGCTGCAGGGGTTCTCTGCTGGCTTCTCCTTACCA
AGCTCAAAGGTAAGGAGTGGTACTACACGTCCTTCGCTCCTCGCATCGGT
CCTCTGACGCTGGCCGCTCTTCTCTTCACCATCGTGGTGCTCTTCGCCAC
CCAGTCCAAGAGCATCTTGAGCCAGATTGGTCGCGTCCTCTACGCCGCTG
CCCCCCTCGCCATCTACTTCTTGAGCATGTTCCTTGGCAGCTTCTACCTA
TCTTTTCTGGCCAATGCTACCTACGCTCAAGCTACTACCTTGGCTTTCAC
GGCTGCATCGAATAATTTTGAGCTTGCCCTGGCGGTGGCTGTGGGCACTT
TTGGACTGAACTCTGGAGAGGCGCTCATGAGTGTGGTAGGGGCCTTGATC
GAGATCCCGACCATGCTGTCCTTGGTGAAGATGGCAGAGTATTTCAAAAG
AGCGTGGTACCAGGGGCAGGAAACCACCGTCCCGAGCAAGCTGTCGAGGA
ACGGAGTAAAAGGAGCGGAGGGAAGTGTTCAGGGGGGGGAGCCAGTGGAG
GGCATCAAGAGCGTGGAGATGCATGTTTAACTCATGAACAGCTGTCACGT
CGTGCAAAGAATGAACATAAAGCAATCAGAGTCGTCGAAATATTTTTGCG
GGCACCAACACGATATATGTGACAAGACCAGCCTGTTTCGAGTAAACCGT
TTGGTGTGGAAATATAGTGAACAATTTGGTTTCGATCGCCTGAAAAAGCT
CACGAGGAAGCCTTTCGAGTCTCCTTTGAGGTATAGCAGGTGAAGGTTGA
GGTCATGATACAAGCATTTGACTGAATTGATCTACAAGCCCTCGTTCTAA
AGCAATAATTGTGTTTTCTCAGAAGTCAGAAATAATCATGGTTGAGGGAG
C
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protein sequence of rna8477

>rna8477-protein ID=rna8477-protein|Name=rna8477|organism=Nannochloropsis gaditana|type=polypeptide|length=143bp
MAGNQPPPFKLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVV
NPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAK
RTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDELETGNDGK
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mRNA from alignment at KK037249.1:57265..58947+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8477 ID=rna8477|Name=rna8477|organism=Nannochloropsis gaditana|type=mRNA|length=1683bp|location=Sequence derived from alignment at KK037249.1:57265..58947+ (Nannochloropsis gaditana)
CGAGATAGGCGGCGTCAGATGTGCCTTTGTGAGCATAGATAAGGCATAAT
TCCGTGCGTATTCATTTCGTACGTCCCCCCAATATGTGCAACGTGCTCGT
TCATCTTCAAAACGAAATTCTCGGGGCGTATATATCGTGGCTTTTTCCCG
CGTGGAATGGAAAAAAGCTCGGATCTGATGCATGGCGTCGACAAATGACT
ACTTCATTCCCCTGACAAAGCATGTCGCACGCTCTGTTTCAAGGTCCTGT
CTTATGCATACAACATACTGACTGTGCGACTGGTTGAATGAATAATATAT
TTTTTGCCTGTCAAAATACTTTACGACCTCCTACAATCCGGCTTCGGGTT
GAGATTCTAAACGTGTAATCAGCAGCCTTGCATCTGACTGCGTGAGTTTT
ATGAGTAGCGCGTCACAAAGTACGTAACTaccacctcctgccccccttaA
AAAACTTCCAACATTGCAACACCAACCCTGGGTATTCACGCAGGCGATTG
AGTCAGTGTGCTGTGGTTTATTAGTCTTTGATACCGAACTGCTTCAACTA
TTACTGGTAAGCCTCGGTAAAAGCCCCTGCAAAGGCATTCTGCAGACAAG
GAGAAAACGCTGAAGCACCGAGCGTTTGGCCAGGACATGAACGTATGATA
AATTCATCGATTTCGTCTTTCCTTAAACATATTTTCAAACCCTTTTCCTC
TCATCCAGCCAAAAACCGAGAGAGCAGGATGGCGGGTAaccagcctcctc
ccttcaagctcctcttcgtctgCGTGGAAAACTCCAATCGTAGTCAAATG
AGCCAGGCGTTCGCCACCATCCTAGGTGGGAATAAAGTGGAGGCTTACAG
CGCGGGAAGCAAGCCCAGTGGTGTCGTCAATCCGAAGGTAAACTGAAAAA
TAGAAAGCCAGCAAGCAGACAGTGGTACGGGGACACTGAAAAGGAGATCG
TGTAGACAGCTTGCATCGACTCAGCGTCATAGCATTTTTCATGACAGGCC
ATCCTTTCCATGAAAGAAATCGGCTATGATTTGTCCCTGCACGACTCCAA
GAGTCTGGAAGAGGTCGAAAGATTCGCTCCCTTCGATGCGGTGGTCACTA
TGGGTTGCGGAGACGCGTGCCCATGGATGCCGGCCAAGCGGACAGTCAAT
TGGACAATCCCTGATCCCAAGGTATGTTTAGGTGGCTAGAGAATGTCGAA
AATGCAACATGAGAAACACTCTGCAGTGAGTCCAAAGACTGCCGGTCGTC
AGGGGGCACGAATGTCGGATGCTGACGTCTTCACCGTTTCTTCATGTTAA
ACGACTCGTCCCGCGTTTCATTTTCGATTGGATACTATCCGACAGCATAT
GGAGCCCGAAGAATTCAATAAAATACGGGACTATATCAGAAGTCTGGtca
aggagctgctggaTGAGCTTGAGACAGGGAATGACGGGAAATGAATATGA
CAAAAAGGGTCAAAGCATGGGGGAAAcccaaggaaggaggagattcGTTC
AAAAAATGGGAGATTCTTGCAAGCTGCGAGGAGTGCAAGAAAAGCTCTCC
GCAAGACTCAATTGAAACATGAATCTTTAAGGCAATActgacaaggaaaa
aaattaCTGAAGTAAGCCGGGATAAAAACCAACGAGGAActaaaaaaaga
agaaaaagtcaTGCGCAAAATCTCTGCATTCAA
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Coding sequence (CDS) from alignment at KK037249.1:57265..58947+

>rna8477 ID=rna8477|Name=rna8477|organism=Nannochloropsis gaditana|type=CDS|length=1296bp|location=Sequence derived from alignment at KK037249.1:57265..58947+ (Nannochloropsis gaditana)
ATGGCGGGTAaccagcctcctcccttcaagctcctcttcgtctgCGTGGA
AAACTCCAATCGTAGTCAAATGAGCCAGGCGTTCGCCACCATCCTAGGTG
GGAATAAAGTGGAGGCTTACAGCGCGGGAAGCAAGCCCAGTGGTGTCGTC
AATCCGAAGGCCATCCTTTCCATGAAAGAAATCGGCTATGATTTGTCCCT
GCACGACTCCAAGAGTCTGGAAGAGGTCGAAAGATTCGCTCCCTTCGATG
CGGTGGTCACTATGGGTTGCGGAGACGCGTGCCCATGGATGCCGGCCAAG
CGGACAGTCAATTGGACAATCCCTGATCCCAAGCATATGGAGCCCGAAGA
ATTCAATAAAATACGGGACTATATCAGAAGTCTGGtcaaggagctgctgg
aTGAGCTTGAGACAGGGAATGACGGGAAATGAATGGCGGGTAaccagcct
cctcccttcaagctcctcttcgtctgCGTGGAAAACTCCAATCGTAGTCA
AATGAGCCAGGCGTTCGCCACCATCCTAGGTGGGAATAAAGTGGAGGCTT
ACAGCGCGGGAAGCAAGCCCAGTGGTGTCGTCAATCCGAAGGCCATCCTT
TCCATGAAAGAAATCGGCTATGATTTGTCCCTGCACGACTCCAAGAGTCT
GGAAGAGGTCGAAAGATTCGCTCCCTTCGATGCGGTGGTCACTATGGGTT
GCGGAGACGCGTGCCCATGGATGCCGGCCAAGCGGACAGTCAATTGGACA
ATCCCTGATCCCAAGCATATGGAGCCCGAAGAATTCAATAAAATACGGGA
CTATATCAGAAGTCTGGtcaaggagctgctggaTGAGCTTGAGACAGGGA
ATGACGGGAAATGAATGGCGGGTAaccagcctcctcccttcaagctcctc
ttcgtctgCGTGGAAAACTCCAATCGTAGTCAAATGAGCCAGGCGTTCGC
CACCATCCTAGGTGGGAATAAAGTGGAGGCTTACAGCGCGGGAAGCAAGC
CCAGTGGTGTCGTCAATCCGAAGGCCATCCTTTCCATGAAAGAAATCGGC
TATGATTTGTCCCTGCACGACTCCAAGAGTCTGGAAGAGGTCGAAAGATT
CGCTCCCTTCGATGCGGTGGTCACTATGGGTTGCGGAGACGCGTGCCCAT
GGATGCCGGCCAAGCGGACAGTCAATTGGACAATCCCTGATCCCAAGCAT
ATGGAGCCCGAAGAATTCAATAAAATACGGGACTATATCAGAAGTCTGGt
caaggagctgctggaTGAGCTTGAGACAGGGAATGACGGGAAATGA
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Synonyms
Publications