EWM22228.1, cds8450 (CDS) Nannochloropsis gaditana

Overview
NameEWM22228.1
Unique Namecds8450
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:57993..58151 +
Alignment locationKK037249.1:58262..58435 +
Alignment locationKK037249.1:58610..58708 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22228.1
Productarsenate reductase
Orig transcript idgnl|cribi|Naga_100312g9.9864.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:57993..58151 +
KK037249.1supercontigKK037249.1:58262..58435 +
KK037249.1supercontigKK037249.1:58610..58708 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004725protein tyrosine phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006470protein dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR017867Tyr_phospatase_low_mol_wt
IPR023485Ptyr_pPase_SF
Homology
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|553186457|ref|XP_005854422.1| (protein-tyrosine low molecular weight [Nannochloropsis gaditana CCMP526] >gi|422294635|gb|EKU21935.1| protein-tyrosine low molecular weight [Nannochloropsis gaditana CCMP526] >gi|585102679|gb|EWM22228.1| arsenate reductase [Nannochloropsis gaditana])

HSP 1 Score: 299.671 bits (766), Expect = 4.996e-103
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
Query:    1 MAGNQPPPFKLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDELETGNDGK 143
            MAGNQPPPFKLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDELETGNDGK
Sbjct:    1 MAGNQPPPFKLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDELETGNDGK 143          
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|1196434468|ref|WP_086103834.1| (low molecular weight phosphatase family protein [Chitinophagaceae bacterium IBVUCB2] >gi|1190623788|gb|OSZ81379.1| low molecular weight phosphatase family protein [Chitinophagaceae bacterium IBVUCB2])

HSP 1 Score: 225.713 bits (574), Expect = 5.392e-74
Identity = 102/128 (79.69%), Postives = 118/128 (92.19%), Query Frame = 0
Query:   10 KLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDELE 137
            KLLFVCVENSNRSQMSQAFA +LGG+ +EAYSAGSKPSG+VNPKAI +MKE+GYDL  HDSKSLEEV++FAPFDAVVTMGCGDACPWMPAK+ ++W IPDPKHMEP+EFNK+RDYI+SLV +LL  L+
Sbjct:    4 KLLFVCVENSNRSQMSQAFAKMLGGSTIEAYSAGSKPSGIVNPKAIAAMKELGYDLGEHDSKSLEEVKQFAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHMEPQEFNKVRDYIKSLVSDLLISLK 131          
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|746061662|ref|WP_039130166.1| (low molecular weight phosphatase family protein [Flavihumibacter sp. ZG627] >gi|743024447|gb|KIC90926.1| protein tyrosine phosphatase [Flavihumibacter sp. ZG627])

HSP 1 Score: 221.476 bits (563), Expect = 3.018e-72
Identity = 100/127 (78.74%), Postives = 115/127 (90.55%), Query Frame = 0
Query:   10 KLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDEL 136
            KLLFVCVENSNRSQMSQAFA I+GG+ VEAYSAGSKPSG+VNPKAI +MKE+GYDLS HDSKSL+EVE+ APFDAVVTMGCGDACPWMPA++ ++W IPDPKHMEPE FN++RDYI S V+EL+  L
Sbjct:    5 KLLFVCVENSNRSQMSQAFARIIGGDAVEAYSAGSKPSGIVNPKAIAAMKELGYDLSTHDSKSLQEVEKHAPFDAVVTMGCGDACPWMPARQFIDWQIPDPKHMEPEAFNEVRDYIASKVRELIANL 131          
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|1012143161|gb|KYP13728.1| (protein tyrosine phosphatase [Flavihumibacter sp. CACIAM 22H1])

HSP 1 Score: 216.468 bits (550), Expect = 3.297e-70
Identity = 99/127 (77.95%), Postives = 112/127 (88.19%), Query Frame = 0
Query:   10 KLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDEL 136
            KLLFVCVEN+NRSQMSQAFA ILGGN+VEAYSAGSKPSG+VNPKAI +MKE+GYDL+ H SKSL EVE+F PFD VVTMGCGDACPWMPAK  V+W IPDPK+MEP +FN++RDYIR  VK LL +L
Sbjct:    5 KLLFVCVENANRSQMSQAFANILGGNQVEAYSAGSKPSGLVNPKAIAAMKELGYDLAKHASKSLTEVEQFGPFDVVVTMGCGDACPWMPAKEFVDWQIPDPKYMEPAQFNEVRDYIRDQVKALLTKL 131          
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|1088955766|emb|SDW60391.1| (Protein-tyrosine-phosphatase [Hydrobacter penzbergensis])

HSP 1 Score: 217.238 bits (552), Expect = 3.304e-70
Identity = 98/127 (77.17%), Postives = 114/127 (89.76%), Query Frame = 0
Query:   10 KLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDEL 136
            KLLFVC+ENSNRSQMSQAFATI GG+ VEA+SAGSKPSG+VNPKAI +MKE+GYDLS HDSKSL+EVE++APFDAVVTMGCGDACPWMPAK+ ++W IPDPKH+EP EFN+IRD I   VK+L+  L
Sbjct:   31 KLLFVCIENSNRSQMSQAFATIYGGDAVEAFSAGSKPSGIVNPKAIAAMKELGYDLSKHDSKSLQEVEQYAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHLEPAEFNQIRDMIGEKVKQLIASL 157          
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|652372322|ref|WP_026768278.1| (low molecular weight phosphatase family protein [Asinibacterium sp. OR53])

HSP 1 Score: 216.083 bits (549), Expect = 3.600e-70
Identity = 98/127 (77.17%), Postives = 114/127 (89.76%), Query Frame = 0
Query:   10 KLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDEL 136
            KLLFVC+ENSNRSQMSQAFATI GG+ VEA+SAGSKPSG+VNPKAI +MKE+GYDLS HDSKSL+EVE++APFDAVVTMGCGDACPWMPAK+ ++W IPDPKH+EP EFN+IRD I   VK+L+  L
Sbjct:    4 KLLFVCIENSNRSQMSQAFATIYGGDAVEAFSAGSKPSGIVNPKAIAAMKELGYDLSKHDSKSLQEVEQYAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHLEPVEFNQIRDMIGEKVKQLIASL 130          
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|916740670|ref|WP_051347726.1| (low molecular weight phosphatase family protein [Asinibacterium sp. OR43])

HSP 1 Score: 215.698 bits (548), Expect = 5.768e-70
Identity = 97/127 (76.38%), Postives = 114/127 (89.76%), Query Frame = 0
Query:   10 KLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDEL 136
            KLLFVC+ENSNRSQMSQAFAT+ GG+ VEA+SAGSKPSG+VNPKAI +MKE+GYDLS HDSKSL+EVE++APFDAVVTMGCGDACPWMPAK+ ++W IPDPKH+EP EFN+IRD I   VK+L+  L
Sbjct:   11 KLLFVCIENSNRSQMSQAFATLYGGDAVEAFSAGSKPSGIVNPKAIAAMKELGYDLSKHDSKSLQEVEQYAPFDAVVTMGCGDACPWMPAKQFIDWQIPDPKHLEPAEFNQIRDMIGEKVKQLIASL 137          
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|502677825|ref|WP_012913533.1| (arsenate reductase ArsC [Pirellula staleyi] >gi|283440832|gb|ADB19274.1| Protein-tyrosine phosphatase, low molecular weight [Pirellula staleyi DSM 6068])

HSP 1 Score: 179.104 bits (453), Expect = 1.696e-55
Identity = 84/130 (64.62%), Postives = 104/130 (80.00%), Query Frame = 0
Query:    8 PFKLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDELE 137
            P KLLFVC+ENSNRSQM++AFA +LGG  VEAYS+GSKPSG VNPKAI +M+E+ YDLS H SK L ++    P+DAVVTMGCGD+CP +PAKR  +W IPDPKH++P EFN++RD IRS V  L+  L+
Sbjct:    8 PKKLLFVCIENSNRSQMAEAFARMLGGEGVEAYSSGSKPSGKVNPKAIAAMRELNYDLSKHLSKPLSDLPP-GPYDAVVTMGCGDSCPHIPAKRREDWQIPDPKHLQPAEFNEVRDLIRSKVASLIQSLD 136          
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|1086632837|emb|SDE03110.1| (Protein-tyrosine-phosphatase [Aquimonas voraii])

HSP 1 Score: 177.178 bits (448), Expect = 1.057e-54
Identity = 80/132 (60.61%), Postives = 103/132 (78.03%), Query Frame = 0
Query:    5 QPPPFKLLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDEL 136
             P P ++LFVCVEN+NRSQM++AFA + GG +VEAYSAGS+PSG++NPKA+  M E+ YDLS H SKSL+E+E    FDAV+TMGCGD+CPW+PAKR  +W +PDPKHM+ E +  +RD I + V  LL EL
Sbjct:    2 SPEPVRVLFVCVENANRSQMAEAFARLHGGARVEAYSAGSRPSGLINPKAVRFMAELAYDLSAHGSKSLDEIEGI-DFDAVITMGCGDSCPWVPAKRREDWALPDPKHMDDEAYRAVRDDISARVLRLLAEL 132          
BLAST of EWM22228.1 vs. NCBI_GenBank
Match: gi|1056765588|ref|WP_068188438.1| (arsenate reductase ArsC [Hymenobacter sedentarius] >gi|972940915|gb|ALW83735.1| protein tyrosine phosphatase [Hymenobacter sedentarius])

HSP 1 Score: 175.252 bits (443), Expect = 6.223e-54
Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 0
Query:   11 LLFVCVENSNRSQMSQAFATILGGNKVEAYSAGSKPSGVVNPKAILSMKEIGYDLSLHDSKSLEEVERFAPFDAVVTMGCGDACPWMPAKRTVNWTIPDPKHMEPEEFNKIRDYIRSLVKELLDE 135
             LFVC+EN+NRSQM+QAFAT+ GG +V AYSAGS+PSGV+NPKAI +M E+GYDL+ H SKSL+EV R   FD VVTMGCGDACP++ AK  ++W IPDPKH+EP EF ++RD I   V +LL +
Sbjct:    4 FLFVCIENANRSQMAQAFATLHGGGQVAAYSAGSRPSGVINPKAIAAMAELGYDLNAHASKSLDEV-RDQEFDYVVTMGCGDACPFIAAKHRLDWQIPDPKHLEPAEFRQVRDLIERQVLDLLAQ 127          
The following BLAST results are available for this feature:
BLAST of EWM22228.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553186457|ref|XP_005854422.1|4.996e-103100.00protein-tyrosine low molecular weight [Nannochloro... [more]
gi|1196434468|ref|WP_086103834.1|5.392e-7479.69low molecular weight phosphatase family protein [C... [more]
gi|746061662|ref|WP_039130166.1|3.018e-7278.74low molecular weight phosphatase family protein [F... [more]
gi|1012143161|gb|KYP13728.1|3.297e-7077.95protein tyrosine phosphatase [Flavihumibacter sp. ... [more]
gi|1088955766|emb|SDW60391.1|3.304e-7077.17Protein-tyrosine-phosphatase [Hydrobacter penzberg... [more]
gi|652372322|ref|WP_026768278.1|3.600e-7077.17low molecular weight phosphatase family protein [A... [more]
gi|916740670|ref|WP_051347726.1|5.768e-7076.38low molecular weight phosphatase family protein [A... [more]
gi|502677825|ref|WP_012913533.1|1.696e-5564.62arsenate reductase ArsC [Pirellula staleyi] >gi|28... [more]
gi|1086632837|emb|SDE03110.1|1.057e-5460.61Protein-tyrosine-phosphatase [Aquimonas voraii][more]
gi|1056765588|ref|WP_068188438.1|6.223e-5464.00arsenate reductase ArsC [Hymenobacter sedentarius]... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8477rna8477Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications