rna8473, rna8473 (mRNA) Nannochloropsis gaditana

Overview
Namerna8473
Unique Namerna8473
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length498
Alignment locationKK037249.1:44669..46367 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100312g2.9863.mrna
Orig protein idgnl|cribi|Naga_100312g2.9863
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:44669..46367 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100312g2gene8214Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8473rna8473-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22227.1cds8446Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8473 ID=rna8473|Name=rna8473|organism=Nannochloropsis gaditana|type=mRNA|length=498bp
ATGCAGGACGAGGGGGAGGGGGCCGGAGGCGGGTGGCCGCTGCCGGCGTG
CACCTTCCAAGACATCTGCAGCTTGCCTCAACAGCGACAGTCATGCAAGC
GATGCCGCCGTCCTTTGCGGGTATGCCTATGTTCGTCGCTGCCACCACGT
CTTTTTGCGCTGCCCCCCCATGTCTCCCTCCTGGTGCTCCAGCACACCGC
GGAGGCACGGAGCAACCCCGTGACTTGCACCGTGCCCATCCTACAGGCGG
TAATTGAAGGAGAAAGGCAGGGCCTGCGGGAGGCAGGGTATTCAAATAGA
GGGGGGAAAGCCTCTTCAGGGGAGCTGTGGCGGCGTGAGAGGGAGTCGGT
CTCCCCTGAGAGTGGTGGAGGGCTGTGTGTGGTCGAGTGCTCCAGCAAGG
GCGTGGACGGATTGAAAGACAGGCGAGTAGTGCGGGCATTGCGGGACAAG
GGAAGCCTGGTGCTCTACCCGGCCGAGGGGGCCAAGGACAGCCGTTGA
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protein sequence of rna8473

>rna8473-protein ID=rna8473-protein|Name=rna8473|organism=Nannochloropsis gaditana|type=polypeptide|length=206bp
MEASQKPAMVVIDLGKPAVIQEAAGAGEGKEQEEQISMSQTMAGYLHTTN
KPVKATLWGFRVAGVLLKLTTLLLLASAGLLFWSSTMSRSHVIVSVCIAI
GLFCLLGSILSCYGVLTLAGYRAMLKRVSRGLERGHHVVTRSGEGESVGS
LAGELAGEAGVLGTVGGRVVQMLGVGGNGGAGAEKGSGCPPLDGAVGGGG
GSRGTG
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mRNA from alignment at KK037249.1:44669..46367+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8473 ID=rna8473|Name=rna8473|organism=Nannochloropsis gaditana|type=mRNA|length=1699bp|location=Sequence derived from alignment at KK037249.1:44669..46367+ (Nannochloropsis gaditana)
GCATCTTGAGAGTGTCGCCACGGTATCCCGTCCCTCATGCATCGATGTGG
ATATTGCTGCCAACCGTTTTCGCAACCCTGGGTGCCGGTGGAGAGTGTGG
AGGGAGCGTGTTCAGGCTGAAATTCACCGGCATGACGGAAcgccgcctgc
tccttgaactttcctctccctctctccgacCTCGATCCTGTTGGATTGGC
CCCATTTTCATTTCAGCCTTCGGGCCGGACTCTTCTTTATATATGAACAG
GTCATACATATCGACCAATGGAGGCCAGTCAGAAGCCTGCCATGGTCGTC
ATAGACCTGGGGAAGCCTGCGGTCATCCAAGAGGCAGCAGgcgccgggga
gggaaaagagcaggaggagcaaatTAGCATGAGTCAAACCATGGCAGGAT
ATTTGCATACAACGAACAAGCCAGTGAAGGCCACTCTATGGGGTTTCCGG
GTGGCAGGTAGGTAGAGATATTGGACTGACAAAACAGGGTATTGAGAGGG
ACGGGTGCTTACCATGGCGTGATAGGGACGGTCCGGAAAAAGAATGTTGT
TAAGTTCTCGCcagcattttcttccccacAGACGCATTGCTTCCTTCGCT
CATCCGCTCCCACTCTTCTATGGCACAGGCGTCCTCCTAAAGCTAACcac
cctcctgcttctcgcCAGCGCGGGTCTTCTGTTCTGGTCCTCCACCATGA
GCCGAAGCCATGTGATCGTCAGTGTGTGCATCGCCATTGGTCTCTTCTGT
CTCCTTGGAAGTATCCTCTCGGTATGCTCACGCTTTTTGGATGGACCTGG
ACCTTTCCTGTCTTTTcaatcctctttcccttcagcTCTCCTTTTAATTT
CGTTTCAAAGAAGGCATGGCTCTCAGCGATCTTtcacctttttccccctt
ttttctccaagTGTTACGGTGTCTTGACTTTGGCAGGCTACCGAGCAATG
TTGAAGAGGGTCAGTCGGGGCCTTGAGCGAGGTAAGGGAaaggctgggag
gggggtgaAAGTCACGGGCCCATGCGATCCGTGTCCTGATCTCTTATCCT
CTCATTCCGATTCCTCAATACCAGGCCACCACGTGGTGACGCGgtcgggc
gagggggagagtgTGGGAAGTCTGGCGGGCGAGCTggcgggcgaggccgg
ggtTCTGGggacggtgggagggagggtggtgcaGATGCTTGGGGTGGGCG
GGAACGGGGGCGCAGGAgcggagaaggggagcgGGTGCCCACCACTAGAT
GGAGccgtgggtggagggggaggtagccGGGGGACAGGCTGAAGGCGTAC
acgaggcggaagcggcTATCATCGCAAGTAAAAGAAAATGCTCTTCTTTG
CTTTGAAGATGTGTGTATACTACACGGCagcggagggcttggagagGAAT
CGGTCCATGGGGTCGGCCCATGTGGAAGATTGGAAGGGGCTAGGTGTGAA
TAAGAGGGATGGGAGAccggaggcggtggaagagcCGAGAGGCGGGTCAA
TGGAAGAGTGCTGGATATGAAAGAGACAGTGTGAAGTCGAGGGGTGCCTT
GAGGGAATGACGCCTTGTGTtcacaaagaggaagaccagaaggacgaaga
cgggagagggttgaagaggagggatatGGAGAATGTACGAGGTCGTGAAA
AACTCAAGGAGGTGAAGTGCCTGTAAAGCAACGCGTGTGAAAGAGTGGG
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Coding sequence (CDS) from alignment at KK037249.1:44669..46367+

>rna8473 ID=rna8473|Name=rna8473|organism=Nannochloropsis gaditana|type=CDS|length=2484bp|location=Sequence derived from alignment at KK037249.1:44669..46367+ (Nannochloropsis gaditana)
ATGGAGGCCAGTCAGAAGCCTGCCATGGTCGTCATAGACCTGGGGAAGCC
TGCGGTCATCCAAGAGGCAGCAGgcgccggggagggaaaagagcaggagg
agcaaatTAGCATGAGTCAAACCATGGCAGGATATTTGCATACAACGAAC
AAGCCAGTGAAGGCCACTCTATGGGGTTTCCGGGTGGCAGGCGTCCTCCT
AAAGCTAACcaccctcctgcttctcgcCAGCGCGGGTCTTCTGTTCTGGT
CCTCCACCATGAGCCGAAGCCATGTGATCGTCAGTGTGTGCATCGCCATT
GGTCTCTTCTGTCTCCTTGGAAGTATCCTCTCGTGTTACGGTGTCTTGAC
TTTGGCAGGCTACCGAGCAATGTTGAAGAGGGTCAGTCGGGGCCTTGAGC
GAGGCCACCACGTGGTGACGCGgtcgggcgagggggagagtgTGGGAAGT
CTGGCGGGCGAGCTggcgggcgaggccggggtTCTGGggacggtgggagg
gagggtggtgcaGATGCTTGGGGTGGGCGGGAACGGGGGCGCAGGAgcgg
agaaggggagcgGGTGCCCACCACTAGATGGAGccgtgggtggaggggga
ggtagccGGGGGACAGGCTGAATGGAGGCCAGTCAGAAGCCTGCCATGGT
CGTCATAGACCTGGGGAAGCCTGCGGTCATCCAAGAGGCAGCAGgcgccg
gggagggaaaagagcaggaggagcaaatTAGCATGAGTCAAACCATGGCA
GGATATTTGCATACAACGAACAAGCCAGTGAAGGCCACTCTATGGGGTTT
CCGGGTGGCAGGCGTCCTCCTAAAGCTAACcaccctcctgcttctcgcCA
GCGCGGGTCTTCTGTTCTGGTCCTCCACCATGAGCCGAAGCCATGTGATC
GTCAGTGTGTGCATCGCCATTGGTCTCTTCTGTCTCCTTGGAAGTATCCT
CTCGTGTTACGGTGTCTTGACTTTGGCAGGCTACCGAGCAATGTTGAAGA
GGGTCAGTCGGGGCCTTGAGCGAGGCCACCACGTGGTGACGCGgtcgggc
gagggggagagtgTGGGAAGTCTGGCGGGCGAGCTggcgggcgaggccgg
ggtTCTGGggacggtgggagggagggtggtgcaGATGCTTGGGGTGGGCG
GGAACGGGGGCGCAGGAgcggagaaggggagcgGGTGCCCACCACTAGAT
GGAGccgtgggtggagggggaggtagccGGGGGACAGGCTGAATGGAGGC
CAGTCAGAAGCCTGCCATGGTCGTCATAGACCTGGGGAAGCCTGCGGTCA
TCCAAGAGGCAGCAGgcgccggggagggaaaagagcaggaggagcaaatT
AGCATGAGTCAAACCATGGCAGGATATTTGCATACAACGAACAAGCCAGT
GAAGGCCACTCTATGGGGTTTCCGGGTGGCAGGCGTCCTCCTAAAGCTAA
CcaccctcctgcttctcgcCAGCGCGGGTCTTCTGTTCTGGTCCTCCACC
ATGAGCCGAAGCCATGTGATCGTCAGTGTGTGCATCGCCATTGGTCTCTT
CTGTCTCCTTGGAAGTATCCTCTCGTGTTACGGTGTCTTGACTTTGGCAG
GCTACCGAGCAATGTTGAAGAGGGTCAGTCGGGGCCTTGAGCGAGGCCAC
CACGTGGTGACGCGgtcgggcgagggggagagtgTGGGAAGTCTGGCGGG
CGAGCTggcgggcgaggccggggtTCTGGggacggtgggagggagggtgg
tgcaGATGCTTGGGGTGGGCGGGAACGGGGGCGCAGGAgcggagaagggg
agcgGGTGCCCACCACTAGATGGAGccgtgggtggagggggaggtagccG
GGGGACAGGCTGAATGGAGGCCAGTCAGAAGCCTGCCATGGTCGTCATAG
ACCTGGGGAAGCCTGCGGTCATCCAAGAGGCAGCAGgcgccggggaggga
aaagagcaggaggagcaaatTAGCATGAGTCAAACCATGGCAGGATATTT
GCATACAACGAACAAGCCAGTGAAGGCCACTCTATGGGGTTTCCGGGTGG
CAGGCGTCCTCCTAAAGCTAACcaccctcctgcttctcgcCAGCGCGGGT
CTTCTGTTCTGGTCCTCCACCATGAGCCGAAGCCATGTGATCGTCAGTGT
GTGCATCGCCATTGGTCTCTTCTGTCTCCTTGGAAGTATCCTCTCGTGTT
ACGGTGTCTTGACTTTGGCAGGCTACCGAGCAATGTTGAAGAGGGTCAGT
CGGGGCCTTGAGCGAGGCCACCACGTGGTGACGCGgtcgggcgaggggga
gagtgTGGGAAGTCTGGCGGGCGAGCTggcgggcgaggccggggtTCTGG
ggacggtgggagggagggtggtgcaGATGCTTGGGGTGGGCGGGAACGGG
GGCGCAGGAgcggagaaggggagcgGGTGCCCACCACTAGATGGAGccgt
gggtggagggggaggtagccGGGGGACAGGCTGA
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Synonyms
Publications