EWM22227.1, cds8446 (CDS) Nannochloropsis gaditana

Overview
NameEWM22227.1
Unique Namecds8446
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:44936..45125 +
Alignment locationKK037249.1:45297..45439 +
Alignment locationKK037249.1:45580..45649 +
Alignment locationKK037249.1:45743..45960 +

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Properties
Property NameValue
Protein idEWM22227.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100312g2.9863.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:44936..45125 +
KK037249.1supercontigKK037249.1:45297..45439 +
KK037249.1supercontigKK037249.1:45580..45649 +
KK037249.1supercontigKK037249.1:45743..45960 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM22227.1 vs. NCBI_GenBank
Match: gi|585102678|gb|EWM22227.1| (hypothetical protein Naga_100312g2 [Nannochloropsis gaditana])

HSP 1 Score: 400.593 bits (1028), Expect = 6.443e-141
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0 
Query:    1 MEASQKPAMVVIDLGKPAVIQEAAGAGEGKEQEEQISMSQTMAGYLHTTNKPVKATLWGFRVAGVLLKLTTLLLLASAGLLFWSSTMSRSHVIVSVCIAIGLFCLLGSILSCYGVLTLAGYRAMLKRVSRGLERGHHVVTRSGEGESVGSLAGELAGEAGVLGTVGGRVVQMLGVGGNGGAGAEKGSGCPPLDGAVGGGGGSRGTG 206
            MEASQKPAMVVIDLGKPAVIQEAAGAGEGKEQEEQISMSQTMAGYLHTTNKPVKATLWGFRVAGVLLKLTTLLLLASAGLLFWSSTMSRSHVIVSVCIAIGLFCLLGSILSCYGVLTLAGYRAMLKRVSRGLERGHHVVTRSGEGESVGSLAGELAGEAGVLGTVGGRVVQMLGVGGNGGAGAEKGSGCPPLDGAVGGGGGSRGTG
Sbjct:    1 MEASQKPAMVVIDLGKPAVIQEAAGAGEGKEQEEQISMSQTMAGYLHTTNKPVKATLWGFRVAGVLLKLTTLLLLASAGLLFWSSTMSRSHVIVSVCIAIGLFCLLGSILSCYGVLTLAGYRAMLKRVSRGLERGHHVVTRSGEGESVGSLAGELAGEAGVLGTVGGRVVQMLGVGGNGGAGAEKGSGCPPLDGAVGGGGGSRGTG 206
The following BLAST results are available for this feature:
BLAST of EWM22227.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102678|gb|EWM22227.1|6.443e-141100.00hypothetical protein Naga_100312g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8473rna8473Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications