rna8471, rna8471 (mRNA) Nannochloropsis gaditana

Overview
Namerna8471
Unique Namerna8471
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1302
Alignment locationKK037249.1:42889..43636 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100724g1.3075.mrna
Orig protein idgnl|cribi|Naga_100724g1.3075
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:42889..43636 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100724g1gene8212Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8471rna8471-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22230.1cds8444Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8471 ID=rna8471|Name=rna8471|organism=Nannochloropsis gaditana|type=mRNA|length=1302bp
ATGGCAGACCCTCCTGGGCGCCCCCCACCCTCTCCTACAATGTCGCAGCG
CCTTCTGGGAAAGGAAAAGCGGCATTCGGCCATACATTCAGCCGCGGAGC
GTGGCGATCTGGAGGAAATAAAGGCGGCCGCGATACTAGATTCGAAAGTA
GTCAACCTCAAAGGACACATGGGACGCACGCCCCTCATGTGCGCCGCGCG
ATGGGGTCAACTCCAGGCCGTCCAGCTTCTCCTCCACCTGGGCGCCCCCG
TGGAGGAGACAGACGTCGCCAACCGGACCTGCCTCCAATGGGCGATCCAG
TACGGACGCATGGGAGTTGCCAGATTCTTGCTCCGACACGGCGCCAACCT
TGAGCACGTGGATGCTGCGGGGATGACGCCACTGCACTACGCCGTCAGCT
ACCTCCAGCCCGAGGCCGTCAAGATGCTGCTGGCACTTGGGGCGTCCCCC
TGTCGTAAAAATGTCAACGGCGCCACTCCTCGCGCCCTCCTGGCCCGTCG
CGCCGCCGTGACTGCCGAGGTGGGAGTCATCGAGGTCCTGCTACAGGAGG
CCGAAGCCACGCGGGAGCTGGAGAAGGGATCCGTCCCCCCCCGCACGCCC
CTCCCCTTGACCCCGCCTATTGCCCTCCCTTCCTCCTTTCCCACCACGGC
TTCTCTCTTGGACAGCCCCGCCCCCGAAGGAGACTACCCATCGCACCATC
CAGCCCCCACGCGTAGAAACGCTGCTCTCTTCTTGGCTCCCCCCGCGCCC
GCCAGCGTTCCCTTGTCCATGCTCTCGCCCCCGCCCTCGAAAATTCCCAG
GCTCCTCTCTCCACAGCCGCCGCCAAGCCAGGGGGCGCCGGGAGGGAGCA
GGGAGGCAGGCGGGGCGGAGATGACGTCCGCGTGTATGTCGACGGATGAA
TCCTTTCAACTAGAGCCGAATGCGATGACCATGGACGCCGCCCATGCCAG
CTTCAGTGTAGGGGACCCCGGCATGGTGGAGTCCTGCTACTCAGAGGCAG
ATTCAGGCGCGGAACGTGGCTACCAGGAAGCAGGCGGTTCAGAATGGCAG
CCTTACACCCCTGCCTTGCCCTGGTCGAGCAGTTGGCAGCAGGAGCAGCG
CCCAAGCTCGTACAGAAGTTCAAACAGCGCACAGGGAAACCAGGCTTGTA
GCCTTCCCTCCTTGGTGCGTACTTGTGGACCGGGAGGGGAAAATCCGTCG
CCCACCGCCAACGCGCTCGACCCAGTGGGCGGTAGGTCCTATCAGGAGAT
GTGTGATGACCTGGACGGGCTGAAAGACCTGGCGGAGCTCTTCGACGCCT
GA
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protein sequence of rna8471

>rna8471-protein ID=rna8471-protein|Name=rna8471|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MPPVFTVRKGPADLVRKGARSTAEAVALALRWLGGEDVAQAVLRGVQAAN
VMQLSLMDPATVRHRREREGYVENLYTQGLPAFPSRPPSRPLSRPPSGPF
ALHS
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mRNA from alignment at KK037249.1:42889..43636-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8471 ID=rna8471|Name=rna8471|organism=Nannochloropsis gaditana|type=mRNA|length=748bp|location=Sequence derived from alignment at KK037249.1:42889..43636- (Nannochloropsis gaditana)
TCCTTCCCTCCCTCCCTCCCATCTTTCACCCTGCCTGGACCTCAGGCCTT
GGAACATGTCAGGAGTGAAGAGGTGTCGTGGGAGGAGCCGGCGTGGGCTG
GCATGCCCCCCGTCTTCACGGTCCGCAAAGGGCCTGCCGACCTGGTCAGG
AAGGGAGCGAGGAGCACCGCAGAGGCCGTTGCGCTCGCCCTCCGCTGGCT
AGGGGGAGAGGACGTGGCACAGGTAAAATGGAAAGGGGGGAAGGGGAGGG
CGACAGAAGCCATGTTGGGTCGGTGGAGGGGTTGGACTTGCTGGTTTCTT
GTGCGAGCGTCACCGGCCCAGCCTCGCGGGAAGGGAGCATGACCCGTCTC
CACCCCCCTCGGCCCCGCTTCCCCCACAGGCAGTCCTTCGTGGCGTGCAA
GCCGCCAACGTCATGCAGCTCTCCTTGATGGACCCGGCCACGGTGCGCCA
CCGGCGTGAGCGGGAGGGGTACGTCGAGAACCTCTACACCCAAGGTCTCC
CTGCCTTTCCCTCCCGTCCTCCCTCCCGCCCTCTTTCCCGCCCTCCCTCG
GGCCCGTTCGCCCTGCACAGCTAGGGACATGACGTGCTCGTGCAGCGCTT
GTCTCGGATGGGCAGGGAGAAGAGAGATTCTGCAGGCTTGGGTCTGGCCC
TTGTCGCCTGTAGGTGGAAGGTCAAATATAGCACGTCTTGGGCGTGCTGC
CGCGCCTAGATTCAAAAGAAATGTAAGGATCGTCCTGAATCCAGTTCC
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Coding sequence (CDS) from alignment at KK037249.1:42889..43636-

>rna8471 ID=rna8471|Name=rna8471|organism=Nannochloropsis gaditana|type=CDS|length=630bp|location=Sequence derived from alignment at KK037249.1:42889..43636- (Nannochloropsis gaditana)
GCAGTCCTTCGTGGCGTGCAAGCCGCCAACGTCATGCAGCTCTCCTTGAT
GGACCCGGCCACGGTGCGCCACCGGCGTGAGCGGGAGGGGTACGTCGAGA
ACCTCTACACCCAAGGTCTCCCTGCCTTTCCCTCCCGTCCTCCCTCCCGC
CCTCTTTCCCGCCCTCCCTCGGGCCCGTTCGCCCTGCACAGCTAGATGCC
CCCCGTCTTCACGGTCCGCAAAGGGCCTGCCGACCTGGTCAGGAAGGGAG
CGAGGAGCACCGCAGAGGCCGTTGCGCTCGCCCTCCGCTGGCTAGGGGGA
GAGGACGTGGCACAGGCAGTCCTTCGTGGCGTGCAAGCCGCCAACGTCAT
GCAGCTCTCCTTGATGGACCCGGCCACGGTGCGCCACCGGCGTGAGCGGG
AGGGGTACGTCGAGAACCTCTACACCCAAGGTCTCCCTGCCTTTCCCTCC
CGTCCTCCCTCCCGCCCTCTTTCCCGCCCTCCCTCGGGCCCGTTCGCCCT
GCACAGCTAGATGCCCCCCGTCTTCACGGTCCGCAAAGGGCCTGCCGACC
TGGTCAGGAAGGGAGCGAGGAGCACCGCAGAGGCCGTTGCGCTCGCCCTC
CGCTGGCTAGGGGGAGAGGACGTGGCACAG
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Synonyms
Publications