rna8465, rna8465 (mRNA) Nannochloropsis gaditana

Overview
Namerna8465
Unique Namerna8465
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1771
Alignment locationKK037249.1:15931..16701 -

Link to JBrowse

Properties
Property NameValue
Productadenylate kinase
Orig transcript idgnl|cribi|Naga_100254g1.5824.mrna
Orig protein idgnl|cribi|Naga_100254g1.5824
GeneADK
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:15931..16701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ADKgene8206Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8465rna8465-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22233.1cds8438Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8465 ID=rna8465|Name=rna8465|organism=Nannochloropsis gaditana|type=mRNA|length=1771bp
GGCCAAGAAGGAGGCTGTCTTTGCGGAGATTGCTCGCGGCCTGGACACGG
CCCTGGTCGGCAAAAAGGCGCAGGGCCCCAGGCCGGTGGAAAGCCTCCAG
ACCGGTCTCTCCTTAGCCGCCTTTATCGCGCTGGATGCCGCCCTGCGCCG
CCTCTTCCTGGCCCGGGGCCTCGCCTTCCCCTCCCCCCTCGCCGGCATGC
TCGGTCTCTTCGCCCTCCTCCTCGCCACGGGCGCCGGGACGACGGCGGCG
GGGCCGCTTCTCTACCGCGTGCTCAAGCCGGGCACGGACCTTCTGACCCG
CTGGCTGGCCGTTTTCTTCGTCCCTACTCTCGTCCTCCTTCCGCTCTCCG
CCGGCTCCCTCGCCCCCTCCCTCGCCCTCCGCCTGGGCGCCGTCCTGGTC
CTCGGTTTCGAAGCCTCGCTATTGACCACGGCCAAGCTCGCCGACCTGCT
CACGTCCAAAAACGACGTAGCCGTCTCCTCCCCCCCCCAACCTCGCTCCT
AACCCCCCCCCCCTTCTCCACCACCAAGACCCCCTTCAGCCAGTCGCTGC
ACAAGGCACTCGCCATCGCCACCGCTGTCTCAGGGGCCGTCTCCGTCCTC
CTCTCCGCCCGGCTTGCCGCTTCCGGCTCCCCTCTGCTCCCTTCCCTCGC
AAGGACCCTCTTCACATTCCTGGCCACCATCCTTTCCTACGTGACGGGGG
CTCGCCTCCCTCTCAAGCTCCGCAAGGCCGTCCACCCCCTCCTGTCCTGC
GCTGGGCTGACCCTCGCCCTCCTCTCCCTCCACGCTCGCCTCCTCGGCCA
GTCCCTCACCCACCAGCTCCACGCCTACGTTTCCCGTGCACCCTGCCCCC
TGCATCTTGGGGGGGGCGACCTCCTTCTCGGGCTTCTTGGACCCTCTATC
CTCGCCATGGCCGTCCAGATGTATGAGCGCCGCGCTCTCCTGAAGCAGAA
CCTCAGCAAGATTCTGGGGACCTGCTTGGGAGCCTCCGTTTTCGGCCTCT
TCTCTTCTGCCGCCCTCTCGCGAGCCTTGGGCCTCCCGCCCGCCCTTGGA
AAAGCCACCCTCTCTCGCTGCATCACCACCCCCTTGGCCATGGCCGTGGC
GGGGCTGGTGGGCGCCGAGACCAGCATCGCCGTCCCTGTCGTGGTCCTGA
CAGGGATCCTGGGCGCCAACGCAGGCGCCGCGCGGCTGGCCTCCTACCAA
GTCTCCGACTCCGTGAGCAAAGGGCTGGCCATGGGTGCCGCGGCGCACGG
GATCGGGACGGCCAGCCTGACGGAAGAGCCGGAGCCACTGGCATTTGCAG
CCATGGGGATGGCTCTGACGGGTGTGATGACCACGGTGCTCGTCACCATT
CCCCCCGTGCGAGCGGCTCTGCTTGCAATCTTGGTGAAGGGCGCGAAGAC
GACTGCTTCGTTGCCATAGAGTAAGAAGACGTCGGAAATGACGTGTGGAG
AATGAGTGAAATGTCTGGAATCGACATAATGTTGGGGAGCATAACTCACC
AGGTCAGAGATTTATTCGGCAGAGGCAATAAAACAAATGGATAGATCGCG
ATCTGAAATTCCTACAGAAAAGCTTCAGGCTTTTTTGTCGAGGTGTGAGC
AAGTAAGATGTATGCTAAAATATAATGCTGACAGACAGCATGCATTGGAT
CAAATCGCGCGCACGGAAGTTTAATCCCGCCTTGCTGTGAGGATGGTTTA
AGCTGTCTGATTCCTTGCTGGTAGTATTTTTTCTTCAAATATGTACCATA
TCGAATTTTCTGAAATTCATT
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protein sequence of rna8465

>rna8465-protein ID=rna8465-protein|Name=rna8465|organism=Nannochloropsis gaditana|type=polypeptide|length=148bp
MVEHATSSQRAVATCGVVFSLLLLLLQPHKSVSLRSGGDVTSGNSINKFN
VRHAGMAWIPGFKPVGKISRRTPSSSPFAPGLSRLSGLRMTVAARAVTPK
IIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAAGSWCRTRSSSAW
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mRNA from alignment at KK037249.1:15931..16701-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8465 ID=rna8465|Name=rna8465|organism=Nannochloropsis gaditana|type=mRNA|length=771bp|location=Sequence derived from alignment at KK037249.1:15931..16701- (Nannochloropsis gaditana)
ATGGTCGAGCACGCCACTTCCTCCCAGAGGGCAGTAGCGACATGTGGAGT
TGTGTTCAGCCTCCTCCTCCTGCTGCTGCAGCCACACAAGTCAGTGAGCT
TACGGAGTGGCGGTGATGTGACATCTGGGAACAGCATCAACAAGTTCAAT
GTCAGACATGCAGGCATGGCATGGATTCCAGGATTCAAGCCTGTAGGAAA
GGTGCGTGCGCCTCGAAAAGGGGCGGTGTTGAGACTCGCGCTTGCCTCGG
CTGCTTCTCCCCGTCTTACCATTTTCCTGCCAGATTGCTCCCACATCAAT
GTCTGGCACAACGTTGAATCACCTTAAGCCCGAACAATCACCGTAGATTT
CGAGGCGGACTCCCTCCAGCTCACCATTTGCACCCGGATTGTCCCGTCTG
AGTGGCCTTCGTATGACGGTCGCTGCTCGAGCCGTCACGCCCAAGATCAT
CATCGCCGGTGCACCAGCCTCCGGGAAAGGGACGCAGTGCGAGCTTTTGA
AAGAAAGGTAAGGGTCCCGGATCGGGTGCGCATCGGGCAGTCTCTACCAG
GATGAGTCACGTGCCTGTTAAGAAGGTCACTCGTGTCTCTTTCACTGCAT
ATCGCCTTCCACACCCTCCCCCATCATTGAACAGGTACGGCGTGGTCCAC
CTCTCCACGGGGGATATCCTAAGGGCGGCGGTGCGGGACGGGACGCCGCT
GGGCGCGGAGGCGAAGGGCTTCATGGACAGAGGGGAGCTGGTGCCGGACA
CGGTCATCATCGGCGTGGTGA
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Coding sequence (CDS) from alignment at KK037249.1:15931..16701-

>rna8465 ID=rna8465|Name=rna8465|organism=Nannochloropsis gaditana|type=CDS|length=1788bp|location=Sequence derived from alignment at KK037249.1:15931..16701- (Nannochloropsis gaditana)
GGGAGCTGGTGCCGGACACGGTCATCATCGGCGTGGTGAGTACGGCGTGG
TCCACCTCTCCACGGGGGATATCCTAAGGGCGGCGATTTCGAGGCGGACT
CCCTCCAGCTCACCATTTGCACCCGGATTGTCCCGTCTGAGTGGCCTTCG
TATGACGGTCGCTGCTCGAGCCGTCACGCCCAAGATCATCATCGCCGGTG
CACCAGCCTCCGGGAAAGGGACGCAGTGCGAGCTTTTGAAAGAAAGATGG
TCGAGCACGCCACTTCCTCCCAGAGGGCAGTAGCGACATGTGGAGTTGTG
TTCAGCCTCCTCCTCCTGCTGCTGCAGCCACACAAGTCAGTGAGCTTACG
GAGTGGCGGTGATGTGACATCTGGGAACAGCATCAACAAGTTCAATGTCA
GACATGCAGGCATGGCATGGATTCCAGGATTCAAGCCTGTAGGAAAGGGG
AGCTGGTGCCGGACACGGTCATCATCGGCGTGGTGAGTACGGCGTGGTCC
ACCTCTCCACGGGGGATATCCTAAGGGCGGCGATTTCGAGGCGGACTCCC
TCCAGCTCACCATTTGCACCCGGATTGTCCCGTCTGAGTGGCCTTCGTAT
GACGGTCGCTGCTCGAGCCGTCACGCCCAAGATCATCATCGCCGGTGCAC
CAGCCTCCGGGAAAGGGACGCAGTGCGAGCTTTTGAAAGAAAGATGGTCG
AGCACGCCACTTCCTCCCAGAGGGCAGTAGCGACATGTGGAGTTGTGTTC
AGCCTCCTCCTCCTGCTGCTGCAGCCACACAAGTCAGTGAGCTTACGGAG
TGGCGGTGATGTGACATCTGGGAACAGCATCAACAAGTTCAATGTCAGAC
ATGCAGGCATGGCATGGATTCCAGGATTCAAGCCTGTAGGAAAGGGGAGC
TGGTGCCGGACACGGTCATCATCGGCGTGGTGAGTACGGCGTGGTCCACC
TCTCCACGGGGGATATCCTAAGGGCGGCGATTTCGAGGCGGACTCCCTCC
AGCTCACCATTTGCACCCGGATTGTCCCGTCTGAGTGGCCTTCGTATGAC
GGTCGCTGCTCGAGCCGTCACGCCCAAGATCATCATCGCCGGTGCACCAG
CCTCCGGGAAAGGGACGCAGTGCGAGCTTTTGAAAGAAAGATGGTCGAGC
ACGCCACTTCCTCCCAGAGGGCAGTAGCGACATGTGGAGTTGTGTTCAGC
CTCCTCCTCCTGCTGCTGCAGCCACACAAGTCAGTGAGCTTACGGAGTGG
CGGTGATGTGACATCTGGGAACAGCATCAACAAGTTCAATGTCAGACATG
CAGGCATGGCATGGATTCCAGGATTCAAGCCTGTAGGAAAGGGGAGCTGG
TGCCGGACACGGTCATCATCGGCGTGGTGAGTACGGCGTGGTCCACCTCT
CCACGGGGGATATCCTAAGGGCGGCGATTTCGAGGCGGACTCCCTCCAGC
TCACCATTTGCACCCGGATTGTCCCGTCTGAGTGGCCTTCGTATGACGGT
CGCTGCTCGAGCCGTCACGCCCAAGATCATCATCGCCGGTGCACCAGCCT
CCGGGAAAGGGACGCAGTGCGAGCTTTTGAAAGAAAGATGGTCGAGCACG
CCACTTCCTCCCAGAGGGCAGTAGCGACATGTGGAGTTGTGTTCAGCCTC
CTCCTCCTGCTGCTGCAGCCACACAAGTCAGTGAGCTTACGGAGTGGCGG
TGATGTGACATCTGGGAACAGCATCAACAAGTTCAATGTCAGACATGCAG
GCATGGCATGGATTCCAGGATTCAAGCCTGTAGGAAAG
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Synonyms
Publications