EWM22233.1, cds8438 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|585102686|gb|EWM22233.1| (adenylate kinase [Nannochloropsis gaditana]) HSP 1 Score: 298.13 bits (762), Expect = 3.242e-102 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
Query: 1 MVEHATSSQRAVATCGVVFSLLLLLLQPHKSVSLRSGGDVTSGNSINKFNVRHAGMAWIPGFKPVGKISRRTPSSSPFAPGLSRLSGLRMTVAARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAAGSWCRTRSSSAW 148
MVEHATSSQRAVATCGVVFSLLLLLLQPHKSVSLRSGGDVTSGNSINKFNVRHAGMAWIPGFKPVGKISRRTPSSSPFAPGLSRLSGLRMTVAARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAAGSWCRTRSSSAW
Sbjct: 1 MVEHATSSQRAVATCGVVFSLLLLLLQPHKSVSLRSGGDVTSGNSINKFNVRHAGMAWIPGFKPVGKISRRTPSSSPFAPGLSRLSGLRMTVAARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAAGSWCRTRSSSAW 148
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|1210512820|dbj|GAX28118.1| (adenylate kinase [Fistulifera solaris]) HSP 1 Score: 81.2629 bits (199), Expect = 1.031e-15 Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 0
Query: 57 AWIPGFKPV-GKISRRTPSSSPFAPGL-SRLSGLRMTVAARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
A++P +P+ G S P SPF+ L + L+ L+M+ + PKIII+GAPASGKGTQCE++KE++GVVHLSTGD+LRAA
Sbjct: 20 AFLP-LRPMWGSTSSSFPDDSPFSLHLRATLTQLQMS---KEDPPKIIISGAPASGKGTQCEIIKEKFGVVHLSTGDMLRAA 97
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|298708417|emb|CBJ48480.1| (adenylate kinase [Ectocarpus siliculosus]) HSP 1 Score: 80.4925 bits (197), Expect = 5.451e-15 Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 0
Query: 83 SRLSGLRMTVAARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
+R SG+ M AA + +PKIIIAGAPASGKGTQC ++KERYGVVHLSTGD+LRAA
Sbjct: 104 ARRSGMAMEAAAGS-SPKIIIAGAPASGKGTQCSMIKERYGVVHLSTGDMLRAA 156
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|1210515185|dbj|GAX25897.1| (adenylate kinase [Fistulifera solaris]) HSP 1 Score: 78.5666 bits (192), Expect = 1.084e-14 Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 0
Query: 57 AWIPGFKPV-GKISRRTPSSSPFAPGL-SRLSGLRMTVAARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
A++P +P+ G S P SS F+ L + L+ L+M+ + PKIII+GAPASGKGTQCE++KE++GVVHLSTGD+LRAA
Sbjct: 20 AFLP-LRPMWGSTSSPHPDSSSFSLHLRAALTQLQMS---KEDPPKIIISGAPASGKGTQCEIIKEKFGVVHLSTGDMLRAA 97
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|224009265|ref|XP_002293591.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970991|gb|EED89327.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 77.0258 bits (188), Expect = 4.307e-14 Identity = 34/38 (89.47%), Postives = 38/38 (100.00%), Query Frame = 0
Query: 99 PKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
PK+IIAGAPASGKGTQCEL+KE+YGVVHLSTGD+LRAA
Sbjct: 78 PKLIIAGAPASGKGTQCELIKEKYGVVHLSTGDMLRAA 115
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|397614293|gb|EJK62708.1| (hypothetical protein THAOC_16668 [Thalassiosira oceanica]) HSP 1 Score: 74.7146 bits (182), Expect = 5.632e-13 Identity = 44/101 (43.56%), Postives = 58/101 (57.43%), Query Frame = 0
Query: 56 MAWIPG--FKPVGKISRRTPSSSPFAPGLSRLSGLRMTVAARAV------------------TPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
+A++PG F+ K+S P + G S R +A+R PK+IIAGAPASGKGTQCE++K++YGVVHLSTGD+LRAA
Sbjct: 110 LAFVPGGRFQSEKKVSPAAPQGRSLSLGTLHASKSRDKIASRTKWAEERGYGSSDESTSSGGGPKLIIAGAPASGKGTQCEIIKDKYGVVHLSTGDMLRAA 210
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|219118280|ref|XP_002179918.1| (kinase adenylate kinase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408971|gb|EEC48904.1| kinase adenylate kinase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 72.4034 bits (176), Expect = 2.890e-12 Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0
Query: 50 NVRHAGMAWIPGFKPVGKISRRTPS----SSPFAPGLSRLSGLRMTVAARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
N + + G K + +++R++ S P P S +G VA V KIIIAGAPASGKGTQCE +KE++GVVHLSTGD+LRAA
Sbjct: 56 NFEGIDLVKLLGKKQLKRMARKSQSHRRSDKPAGPKASIGAGF---VAKDPV--KIIIAGAPASGKGTQCETIKEKFGVVHLSTGDMLRAA 141
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|1072229291|gb|OEU14026.1| (putative nucleoside-phosphate kinase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 70.8626 bits (172), Expect = 4.165e-12 Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 0
Query: 97 VTP-KIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAAGS 138
+TP IIIAGAPASGKGTQCE++KE +GVVHLSTGD+LRAA S
Sbjct: 1 MTPVNIIIAGAPASGKGTQCEIIKEEFGVVHLSTGDMLRAAVS 43
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|873232678|emb|CEM04659.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 70.4774 bits (171), Expect = 8.110e-12 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 0
Query: 71 RTPSSSPFAPGLSRLSGLRMTVAARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
R+P S P P R + P+IIIAGAP GKGTQC+ +K++YGV+HLSTGDILRAA
Sbjct: 28 RSPPSRPRLPASRRRPSPSLRGQPSMRGPQIIIAGAPGVGKGTQCDFIKQQYGVIHLSTGDILRAA 93
BLAST of EWM22233.1 vs. NCBI_GenBank
Match: gi|698779563|ref|XP_009822825.1| (hypothetical protein H257_01360 [Aphanomyces astaci] >gi|574122486|gb|ETV87962.1| hypothetical protein H257_01360 [Aphanomyces astaci]) HSP 1 Score: 71.633 bits (174), Expect = 1.039e-11 Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0
Query: 93 AARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
AAR PK+II G PA GKGTQCELL ++YGVVHLSTGDILRAA
Sbjct: 734 AARNGPPKLIICGPPAGGKGTQCELLVQQYGVVHLSTGDILRAA 777 HSP 2 Score: 66.2402 bits (160), Expect = 6.976e-10 Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0
Query: 99 PKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
P I+I G PA GKGTQCELL ++YGVVHLSTGDILRAA
Sbjct: 504 PTIVICGPPAGGKGTQCELLVKQYGVVHLSTGDILRAA 541 HSP 3 Score: 64.6994 bits (156), Expect = 2.397e-9 Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
Query: 85 LSGLRMTVAARAVTPKIIIAGAPASGKGTQCELLKERYGVVHLSTGDILRAA 136
+ G +V + PK+II G PA GKGTQCE L ++YGVVHLSTGDILR A
Sbjct: 941 MEGGGASVKHEVMPPKLIICGPPAGGKGTQCEQLVKKYGVVHLSTGDILRDA 992 The following BLAST results are available for this feature:
BLAST of EWM22233.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|