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Properties
| Property Name | Value |
|---|
| Product | TRAM, LAG1 and CLN8 lipid-sensing domain containing protein |
| Orig transcript id | gnl|cribi|Naga_100195g4.689.mrna |
| Orig protein id | gnl|cribi|Naga_100195g4.689 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:697867..700084 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8447 ID=rna8447|Name=rna8447|organism=Nannochloropsis gaditana|type=mRNA|length=2162bp
AGGTATATACATCGGCGAGTCCAAGATCAGAGTGTGATTCCTGGTTTTTC
CATTACGATTTTCGTTTTGGTGTGGGTTTTTCAGCTTTTAATGCGAAGCA
ACATGAAGGGTGGTATCTCAGTGGCTGAAATATGTCTGCACTTGTGGCCG
TTAGGACCATGGATGTGTGACCACTCGTGATAGTCGAATTTCTGAAGCAG
GACCTCTACCCAGAACAAGAACATGAGTCCTGGTAGCGATGATGTAAAGT
ACTCATGTTCTGAATTGCTTTTTTCAGACAGTTTTCATAATCTCACATCT
TGTTGCTGAAGCATACTTTCTATTTTGACCTCCTCCCTCAGACGACTTCT
CCAGGCCGTTCTTTACGCCTCATTTTCGCTTCTTTATCACATGTCCGTGG
ACAGGCGTCATGAAGAGAAGACGGCTACAGGATGAGAACATACAGAATAA
TTGCATACACAAGACTAGTAAAAGAGGCAATAAGAGCTTGAACACTTTTA
GGTTTCTTGCACAATCTATCCTGCTGCTCGCTCTTGCCCTAACTCTTCGC
GTCCATGCTTTTAAGCTTCCTCCACTCGGTTCCCAACGCGACCGTCCCCC
CCCTCCACCTCTTCCTTCTTCATCCGCATCAAAAGTTCTAGTGGTGGGCG
CGACGGGACGCGTAGGTGGCTTGGTCGTGAAAATCCTCGTGTCAAGAGGA
TATCAAGTCGTGGCCCTTGCCCGCGACCCCGACAGCGCACCCGCCAAAGC
CCTGGCACTTCTGCCTCTCGCGCAAGAAGATGAAAAAGGGACGGTCGGCA
AGGTTACTATCATGAAGGGGGACGTGACGGATCCTTCCTCGTTGCTTGCA
CCAATACGTGGGTGCGTGGCGTGCATTGCAGTGAGTGGGGCCAGTCGCGT
CACGCAGCCTCTCATGGACACGGCCGCCTTCGTTCTCCACGCCATCCTGC
ATCTGATCTCCTTGGCCAAGCGAGCTGTCACTCCACGGGAGTGGAGCGCT
TCCGACTCTTCCTCTTCTTTTGACTCCCGCTATCACTCCGCCTCCTCCCT
TGCGACCACTTACCCCAGGGAGCATCCCTACAACGTCAACTACCTCGGAA
CGCTCAACCTCCTGCAGGCCGCCCGGCAAGCTGGCGTGCCCAAGTTCATC
CGCGTCACGGGCCTGAGTGTGGGCTACTCGGCCTTCAACCCCATAACCTG
CCTCTTGAACCTGGTCATCTCCTTCGCAGTCCGGTGGCAACTAGCGGGAG
AGCGGGCGATCCGAGCCTCGGGTGTCGATTACACCGTGATCAGGCCTGGG
GCCCTCACCGACGCAGCGGCGGCACCAGAGAGTCTGGTAGGGAAAGGGGA
CGGGGGGAAGATCCCAGTGGGGAGGGTGAGTAGGGAGGACGTAGCCTGCC
TGTGTGTGGCCGCGCTGGAGTCTGCAAAGGCGTCGAACATGACGCTGTCC
CTAGCCGGGTCCAAGGCGGGAAGAAGAGAGGTGGGGCATAAGGGTCCAGG
AAGCGTGGAAGGGCCTTCGTCGAAGTCGACGAGCAGCTCGGGGCCTCTCG
ATTCCAAGGCTGCCTTTCCCGCGCCTGGGCCCTCACGGGGCATGAACAAC
GACCCCCTCTGGTCCTATAAAATCCTCCTCCGCCGAGAAGGACGTCCTGA
CGTGACTCCCTTGAGTCCAAAGCTTCACCGACTTGGTGTTTGTATATTCG
TGACGGCGGTTTCAAGCCTCGGGGTAGGCTTAGGAGCAGGGCTGTGGAAG
GGTGGGCACGCACTTGGGCGATGGCTCCGACAGCGCGCCTTGCCACCACA
AGAAGGAATTCCAGCCACGATGAGGGGGGGTTGCTGGAGTTTGGCGGGTA
TAGGTGCGCGGAAGGAGAAATGACTCAGCGGGAGGTTGGATGGGCGGGGA
GGATAGAAGGGGCGGTAAGACTGTATTTCTCGCTTTGTGTGACATGGTTC
TTTGCCTTGCGCTTTAGTTGCCTATTCGGCGGTGCACCCGCATGTATTCT
TTAGTCTTTTTAGGTATAGGTAAAATCGTAGAAGAGAACTTGTGTATCAA
TGCCGAGAAGAAATAAGATAAACACAGCGTCACTATCAAGCGCCACCACC
TCGCAGTGACAGGTATCGAGTTCAAATTGATCAGCTTGGTACTAAAAACG
CAATTGATTAAA back to topprotein sequence of rna8447 >rna8447-protein ID=rna8447-protein|Name=rna8447|organism=Nannochloropsis gaditana|type=polypeptide|length=284bp
MAGTQAAASCLGPNLGITAQWMAAPISGVCVSATIWSLLFGIVQVLPIFK
GRTFGYKTRVVAIFHAFTTMTLAYRLSFMCRPLEIGGINTPGQDIVVNVA
GGFFLYDLISWIIYGYVIAKYDWMQLFHHASCLVGSWACWSSGRSGADVT
FALFVAELANPFMYLRYLLREVGWKDTTLARTNQAIFALAMTLTIPILAP
ILACVILMEPKSHPLHQAAAVGLVVVNMMWFFKFMTKYWAAAQTGPLKTG
RKASPRKGSAALGGEIGGLIMSPSGAGASELKED back to topmRNA from alignment at KK037248.1:697867..700084+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8447 ID=rna8447|Name=rna8447|organism=Nannochloropsis gaditana|type=mRNA|length=2218bp|location=Sequence derived from alignment at KK037248.1:697867..700084+ (Nannochloropsis gaditana)
AAGGGGCAGAGAGGCCTTCCCTCGCTAGACTTCACTACGCAAATTCTGCT
TGAACGATTAATGTGGGCTTCCTCTCATCGTAACATCGTAAGATGCACGA
AGCAAAACAAAAAGGAAAGTTAGGAATGCAAGTAAACATTCTCGGTGGTC
CTTAGTTTGTCGAATTCCCTTACAAGCTTTACATTTCGCAGCACCTTCAA
TCGTTTGTTCCTTAAATGAGATATAATAGTTCAATTCACCGTCTGCAACA
CAATCACGTAgtaggaagaggaggaggacactgTTTCTTGTGTTGCTCAG
TGATTTCGGCGCCGGCATCACACAAAGCGTACAATGGCCGGAACTCAAGC
CGCAGCCTCCTGTCTTGGCCCCAATCTGGGCATCACAGCTCAATGGATGG
CAGCGCCGGTAAGCTCTAATTATGATAGCAATGTAGCAATGGAACACTTT
TGGCTAGTTTCTGACCTACGGCTTTTTGCCTCGTTAAATTTGTATAACAC
CCTGTCAAACAGATTAGTGGCGTCTGTGTCTCTGCCACCATATGGTCTCT
GCTTTTTGGAATAGTCCAGGTCTTGCCCATCTTCAAGGGGCGCACATTCG
GTTATAAGGTACGGAAAGTCACGGGAACCAAACGACGTCAGTCGTGGGTC
GACAGTAAACCACAATGATTTAGTCATGCAGAGTACATACGAATGATCGA
TTGAAGACACCCAAACGTTGTCGAATCCTGAAGCTTTCCAATGAGTCCGC
GAATTTTCgaccactcctccctctagACGCGGGTGGTCGCAATCTTCCAC
GCATTCACCACTATGACCCTCGCCTACCGCCTATCCTTCATGTGCCGGCC
TTTGGAAATCGGAGGGATTAATACGCCTGGGCAGGACATCGTAGTAAACG
TGGCAGGAGGCTTCTTCCTTTACGATCTGATCTCTTGGATCATCTACGGC
TACGTTATTGCAAAGTACGTGGGAGCAGGGAAAatgggcggcgggcgggg
gggaaacaaGCAATTCGATAGGATCTTAGATTGTTAGGATTATAGTTGCT
CTGATTGAAACTTTCTCATTCATTTTCTGTGCGAAGCCTCTTCTCACGCT
GCATCTTCCCGGCCGCTTCTtggtctcttttcctcttcttttcctccccc
ttccctgcagATATGATTGGATGCAGCTCTTCCACCACGCCTCATGTCTC
GTGGGGTCGTGGGCATGCTGGTCCTCGGGCCGCTCCGGCGCCGATGTGAC
TTTCGCGCTCTTTGTAGCGGAGCTGGCGAACCCCTTCATGTATCTGCGCT
ACTTGTTGCGGGAAGTCGGGTGGAAGGATACGACCCTGGCACGCACGAAc
caggtgggaagggggaaagaaagggataaTGATGCGGGAGCTGGACGTGG
CAGATGCGTCATGGAGATGTTGATGGCTCACTCACACGggtccctgcctc
cctcggcccctcccccatcaGGCCATCTTCGCCCTTGCCATGACGCTGAC
CATCCCCATCCTAGCGCCTATCCTCGCCTGCGTCATCCTGATGGAGCCCA
AATCCCACCCCCTGCACCAAGCCGCAGCCGTGGGTCTGGTCGTTGTGAAC
ATGATGTGGTTCTTCAAGTTCATGACCAAGTACTGGGCGGCGGCGCAGAC
GGGGCCCCTCAAGACGGGTCGAAAAGCCTcgccgaggaaaggaagcgctG
CCTTGGGAGGAGAAATAGGGGGCTTGATCATGAGCCCTTCAGGTGCGGGG
GCTTCGGAGCTGAAGGAGGATTAGAGGCTTGGAATGAGAACAGAGACTGG
AAGAGGGGGGTTATGGGACAAGAGGAATAGAGGAGCTCGAATAAAAGATA
GCTGGTGTTAAAAGGATAGCTGGTGTTCACAATGTGACTTATTTTTGGTG
AAAATAGGCTGGTGAATGGTCGGATGATGTTCTGCTAAGGATTATGAACG
GCTGGGCATCCGCAAGCTGGCGAGAAAGGAGATTTTCTTTGTGGAGTAGA
ATGACGGCGTGTAGACTTCGAtgacgcctccctctctcgggaagaaaagg
atgcGTGTATAGGGATAAAACGCCACTAAACGTGGCTTGAGAATGGCAAG
TATAGATGAAAACAAGCAATCGTTTCAATAGGACAACGAACATGATGCTG
ACAAGAGCCTGGGGATGGATCATGCGAACTTGTTGGACAAGTGGCGGGCA
CGGGGCAAAATTCGCGCC back to topCoding sequence (CDS) from alignment at KK037248.1:697867..700084+ >rna8447 ID=rna8447|Name=rna8447|organism=Nannochloropsis gaditana|type=CDS|length=4275bp|location=Sequence derived from alignment at KK037248.1:697867..700084+ (Nannochloropsis gaditana)
ATGGCCGGAACTCAAGCCGCAGCCTCCTGTCTTGGCCCCAATCTGGGCAT
CACAGCTCAATGGATGGCAGCGCCGATTAGTGGCGTCTGTGTCTCTGCCA
CCATATGGTCTCTGCTTTTTGGAATAGTCCAGGTCTTGCCCATCTTCAAG
GGGCGCACATTCGGTTATAAGACGCGGGTGGTCGCAATCTTCCACGCATT
CACCACTATGACCCTCGCCTACCGCCTATCCTTCATGTGCCGGCCTTTGG
AAATCGGAGGGATTAATACGCCTGGGCAGGACATCGTAGTAAACGTGGCA
GGAGGCTTCTTCCTTTACGATCTGATCTCTTGGATCATCTACGGCTACGT
TATTGCAAAATATGATTGGATGCAGCTCTTCCACCACGCCTCATGTCTCG
TGGGGTCGTGGGCATGCTGGTCCTCGGGCCGCTCCGGCGCCGATGTGACT
TTCGCGCTCTTTGTAGCGGAGCTGGCGAACCCCTTCATGTATCTGCGCTA
CTTGTTGCGGGAAGTCGGGTGGAAGGATACGACCCTGGCACGCACGAAcc
agGCCATCTTCGCCCTTGCCATGACGCTGACCATCCCCATCCTAGCGCCT
ATCCTCGCCTGCGTCATCCTGATGGAGCCCAAATCCCACCCCCTGCACCA
AGCCGCAGCCGTGGGTCTGGTCGTTGTGAACATGATGTGGTTCTTCAAGT
TCATGACCAAGTACTGGGCGGCGGCGCAGACGGGGCCCCTCAAGACGGGT
CGAAAAGCCTcgccgaggaaaggaagcgctGCCTTGGGAGGAGAAATAGG
GGGCTTGATCATGAGCCCTTCAGGTGCGGGGGCTTCGGAGCTGAAGGAGG
ATTAGATGGCCGGAACTCAAGCCGCAGCCTCCTGTCTTGGCCCCAATCTG
GGCATCACAGCTCAATGGATGGCAGCGCCGATTAGTGGCGTCTGTGTCTC
TGCCACCATATGGTCTCTGCTTTTTGGAATAGTCCAGGTCTTGCCCATCT
TCAAGGGGCGCACATTCGGTTATAAGACGCGGGTGGTCGCAATCTTCCAC
GCATTCACCACTATGACCCTCGCCTACCGCCTATCCTTCATGTGCCGGCC
TTTGGAAATCGGAGGGATTAATACGCCTGGGCAGGACATCGTAGTAAACG
TGGCAGGAGGCTTCTTCCTTTACGATCTGATCTCTTGGATCATCTACGGC
TACGTTATTGCAAAATATGATTGGATGCAGCTCTTCCACCACGCCTCATG
TCTCGTGGGGTCGTGGGCATGCTGGTCCTCGGGCCGCTCCGGCGCCGATG
TGACTTTCGCGCTCTTTGTAGCGGAGCTGGCGAACCCCTTCATGTATCTG
CGCTACTTGTTGCGGGAAGTCGGGTGGAAGGATACGACCCTGGCACGCAC
GAAccagGCCATCTTCGCCCTTGCCATGACGCTGACCATCCCCATCCTAG
CGCCTATCCTCGCCTGCGTCATCCTGATGGAGCCCAAATCCCACCCCCTG
CACCAAGCCGCAGCCGTGGGTCTGGTCGTTGTGAACATGATGTGGTTCTT
CAAGTTCATGACCAAGTACTGGGCGGCGGCGCAGACGGGGCCCCTCAAGA
CGGGTCGAAAAGCCTcgccgaggaaaggaagcgctGCCTTGGGAGGAGAA
ATAGGGGGCTTGATCATGAGCCCTTCAGGTGCGGGGGCTTCGGAGCTGAA
GGAGGATTAGATGGCCGGAACTCAAGCCGCAGCCTCCTGTCTTGGCCCCA
ATCTGGGCATCACAGCTCAATGGATGGCAGCGCCGATTAGTGGCGTCTGT
GTCTCTGCCACCATATGGTCTCTGCTTTTTGGAATAGTCCAGGTCTTGCC
CATCTTCAAGGGGCGCACATTCGGTTATAAGACGCGGGTGGTCGCAATCT
TCCACGCATTCACCACTATGACCCTCGCCTACCGCCTATCCTTCATGTGC
CGGCCTTTGGAAATCGGAGGGATTAATACGCCTGGGCAGGACATCGTAGT
AAACGTGGCAGGAGGCTTCTTCCTTTACGATCTGATCTCTTGGATCATCT
ACGGCTACGTTATTGCAAAATATGATTGGATGCAGCTCTTCCACCACGCC
TCATGTCTCGTGGGGTCGTGGGCATGCTGGTCCTCGGGCCGCTCCGGCGC
CGATGTGACTTTCGCGCTCTTTGTAGCGGAGCTGGCGAACCCCTTCATGT
ATCTGCGCTACTTGTTGCGGGAAGTCGGGTGGAAGGATACGACCCTGGCA
CGCACGAAccagGCCATCTTCGCCCTTGCCATGACGCTGACCATCCCCAT
CCTAGCGCCTATCCTCGCCTGCGTCATCCTGATGGAGCCCAAATCCCACC
CCCTGCACCAAGCCGCAGCCGTGGGTCTGGTCGTTGTGAACATGATGTGG
TTCTTCAAGTTCATGACCAAGTACTGGGCGGCGGCGCAGACGGGGCCCCT
CAAGACGGGTCGAAAAGCCTcgccgaggaaaggaagcgctGCCTTGGGAG
GAGAAATAGGGGGCTTGATCATGAGCCCTTCAGGTGCGGGGGCTTCGGAG
CTGAAGGAGGATTAGATGGCCGGAACTCAAGCCGCAGCCTCCTGTCTTGG
CCCCAATCTGGGCATCACAGCTCAATGGATGGCAGCGCCGATTAGTGGCG
TCTGTGTCTCTGCCACCATATGGTCTCTGCTTTTTGGAATAGTCCAGGTC
TTGCCCATCTTCAAGGGGCGCACATTCGGTTATAAGACGCGGGTGGTCGC
AATCTTCCACGCATTCACCACTATGACCCTCGCCTACCGCCTATCCTTCA
TGTGCCGGCCTTTGGAAATCGGAGGGATTAATACGCCTGGGCAGGACATC
GTAGTAAACGTGGCAGGAGGCTTCTTCCTTTACGATCTGATCTCTTGGAT
CATCTACGGCTACGTTATTGCAAAATATGATTGGATGCAGCTCTTCCACC
ACGCCTCATGTCTCGTGGGGTCGTGGGCATGCTGGTCCTCGGGCCGCTCC
GGCGCCGATGTGACTTTCGCGCTCTTTGTAGCGGAGCTGGCGAACCCCTT
CATGTATCTGCGCTACTTGTTGCGGGAAGTCGGGTGGAAGGATACGACCC
TGGCACGCACGAAccagGCCATCTTCGCCCTTGCCATGACGCTGACCATC
CCCATCCTAGCGCCTATCCTCGCCTGCGTCATCCTGATGGAGCCCAAATC
CCACCCCCTGCACCAAGCCGCAGCCGTGGGTCTGGTCGTTGTGAACATGA
TGTGGTTCTTCAAGTTCATGACCAAGTACTGGGCGGCGGCGCAGACGGGG
CCCCTCAAGACGGGTCGAAAAGCCTcgccgaggaaaggaagcgctGCCTT
GGGAGGAGAAATAGGGGGCTTGATCATGAGCCCTTCAGGTGCGGGGGCTT
CGGAGCTGAAGGAGGATTAGATGGCCGGAACTCAAGCCGCAGCCTCCTGT
CTTGGCCCCAATCTGGGCATCACAGCTCAATGGATGGCAGCGCCGATTAG
TGGCGTCTGTGTCTCTGCCACCATATGGTCTCTGCTTTTTGGAATAGTCC
AGGTCTTGCCCATCTTCAAGGGGCGCACATTCGGTTATAAGACGCGGGTG
GTCGCAATCTTCCACGCATTCACCACTATGACCCTCGCCTACCGCCTATC
CTTCATGTGCCGGCCTTTGGAAATCGGAGGGATTAATACGCCTGGGCAGG
ACATCGTAGTAAACGTGGCAGGAGGCTTCTTCCTTTACGATCTGATCTCT
TGGATCATCTACGGCTACGTTATTGCAAAATATGATTGGATGCAGCTCTT
CCACCACGCCTCATGTCTCGTGGGGTCGTGGGCATGCTGGTCCTCGGGCC
GCTCCGGCGCCGATGTGACTTTCGCGCTCTTTGTAGCGGAGCTGGCGAAC
CCCTTCATGTATCTGCGCTACTTGTTGCGGGAAGTCGGGTGGAAGGATAC
GACCCTGGCACGCACGAAccagGCCATCTTCGCCCTTGCCATGACGCTGA
CCATCCCCATCCTAGCGCCTATCCTCGCCTGCGTCATCCTGATGGAGCCC
AAATCCCACCCCCTGCACCAAGCCGCAGCCGTGGGTCTGGTCGTTGTGAA
CATGATGTGGTTCTTCAAGTTCATGACCAAGTACTGGGCGGCGGCGCAGA
CGGGGCCCCTCAAGACGGGTCGAAAAGCCTcgccgaggaaaggaagcgct
GCCTTGGGAGGAGAAATAGGGGGCTTGATCATGAGCCCTTCAGGTGCGGG
GGCTTCGGAGCTGAAGGAGGATTAG back to top
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