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Properties
| Property Name | Value |
|---|
| Product | ap4a phosphorylase ii |
| Orig transcript id | gnl|cribi|Naga_100376g5.1384.mrna |
| Orig protein id | gnl|cribi|Naga_100376g5.1384 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:684970..686535 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8441 ID=rna8441|Name=rna8441|organism=Nannochloropsis gaditana|type=mRNA|length=1475bp
ATATTTTTTCGCCTGCGTGCTTGCGCTGGGACATGCGTAAGGGAGAATTG
TTGGACGTGAACCTCTTGTTGTCCTATCTGTGGCTCCTGCCTAGTCTGCC
ATATCGCGTGTCGTCACGCCGCCATCCGAGTCGTTGGTGCCACACGTTGA
GGAGATACTGGCTCAGAAAACAAACCCCTTCCGACACGGCACAAAGTACC
GAGTCCCATCAAGCCAGGTACAACATGGGCAAGAAGCGGAAATCCATGCC
TGTGACCTTCACAGCGCCATCCTTGCAGAAGACGAAGCTCAAAACCTCCC
CTGGTGAAGGCACCTCCACCAGCACGATGACGATCAATGCCGCACCCTTA
GCCGGTTTATCCCACTCGTCTCCATCCTTCTCCATATTGGAGAGAGCTTT
TGAGCAACTGGCCTGCGACCCCTTGGATTTTTTAGTTGGGGAAGGTAAAA
GAGCATCCTTTCTGGAAAAGCACTGGGAAAGTGCTCCCTCTGTCTTCCCT
TCTACCCCGGAACGCCTTGCCTTCTTCCACCACCTTCTCTCCCTCGAGGA
TTACCTGAAAACCGCCCGGGAACGCGATGAAAAAGGCGAGGAGAAGGGTC
GTCATAGTTTCCGTTTGGGTGTGGACGTGAATGCGGCGCGATACGTGCAC
GGTCAGCGGGAGACGCACAATGCGACCAATAGGGGGCAGGGCACGGCAAG
CACGCTGTCCCGCCTGCACGAGCAAAAGGGATGTACGCTACAGGTCCTCC
AGCCTCAGCGATGGGACGACAAATGCTGGCGCTTGGCAGCGGCTCTTGAA
GCCCAATTTGGGTGTCTGGTGGGAGTGAACGCCTACCTGACTCCGGGGGG
CACCCAGGGCCTTGCGCCCCATTCCGACCCGGTGGAGATCTTCGTGATCC
AGACGGAGGGAAAGAAAGCCTGGCGGCTCTATGCCCCCATGGGCAACTTT
GCCTTGCCCAATCAAGCCAGCGGGGACTTGAAGCAGGAGGAGATCGGAAC
GCCCTCTCTGGAGGTGGTGCTGAGCCCGGGAGACGTGTTGTATATGCCCC
GAGGCACCGTCCACCAGGCAGTGGCAGAGGGCGGGAGGGAGGGCGGGCGG
GCAGCCTCCGCCCACTTGACCCTGTCCACGTACCAGCAATGGAGCTACGC
AGACTGGGCCACGCACATCTTTCAAGTCGTCGGGCACAACGTCACCTTCC
GCACCGCGCCCTCCACCTTCCCCCTCGCCCTCCGCCGCTCTCCCCCCCCG
GGACCAGCCTCCTCCACAGCCTTCTTCATCCCCCCACCCCTTCCCCAGCT
CTTTCCTCCGTGCGCCGCCTGGCCGAGGGCTTGCGCGAGATGGCGGATCA
TCTCGAGCGGCACCCGAAAATCGCCGACCTGGGCTTCTGGTCCCTGTGCA
TGGACTTCTGGGGGACGCGGCTCCCTCCCCACCCAACCTCCCTCCCTCCC
TCCGGCCCTGCCCCGATGCGGATGA back to topprotein sequence of rna8441 >rna8441-protein ID=rna8441-protein|Name=rna8441|organism=Nannochloropsis gaditana|type=polypeptide|length=429bp
MSQRKHAGEKIYKMAEECKSASACPPVSSSSQLSDPDDNNSEFSRFSTAR
GGPSTSSSFPTSLVSSSAAPALPPQTWQPMETSTTQDLHRPHASPDWWSE
ASQKTTQCLDVASELFAEHRRLGLGLAALLMCLGIWLNVNGNANGGFTGG
GASIAPEGAGLWGRQGQEGDLPSPLRRLIQETRARALGAEDHQMGSTGAS
APALQPLPTQREFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVP
AVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGP
HLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGV
VEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFL
GCLLSGGAETTQTIKRFGPFNILKAVVPP back to topmRNA from alignment at KK037248.1:684970..686535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8441 ID=rna8441|Name=rna8441|organism=Nannochloropsis gaditana|type=mRNA|length=1566bp|location=Sequence derived from alignment at KK037248.1:684970..686535+ (Nannochloropsis gaditana)
ATGTCCCAGCGCAAGCACGCAGGCGAAAAAATATATAAGATGGCAGAGGA
ATGTAAATCAGCCTCAGGTAAGCACTGCTAGATCAAACCTTTTAGAAAGC
TACCCTTTTTACGTCCCCTCTCGCATTCCTTTATCCCCTTGTTCCACTTC
GATCATATACACAGCCTGCCCACCCgtatcatcatcatcacaaCTTTCGG
ACCCTGACGACAACAACAGTGAGTTCTCGAGATTCAGCACGGCCCGCGGc
ggcccctccacctcctcgtcattccccacctcccttgtCTCTTCGTCCGc
agctcccgctctccctccccagacaTGGCAACCGATGGAGACTAGCACCA
CACAAGACCTGCATCGTCCGCATGCGAGTCCTGATTGGTGGTCGGAGGCA
AGTCAGAAAACCACGCAATGCCTGGATGTGGCTTCGGAACTCTTCGCCGA
GCATCGTCGTCTTGGTCTGGGTCTGGCGGCCCTCTTGATGTGTCTCGGAA
TCTGGCTGAATGTAAACGGCAATGCCAACGGCGGGTTCacgggaggtgga
gcgtcGATAGCCCCAGAGGGAGCAGGCCtgtgggggaggcagggccagga
aggagaccTGCCATCGCCCCTTCGACGGCTCATCCAAGAGACTCGAGCCC
GGGCTCTTGGGGCTGAGGACCATCAAATGGGAAGCACAGGGGCTTCCGCA
CCGGCCTTGCAGCCCTTGCCAACACAGAGAGAGGTAGTACGGGAGGGCCG
CGTCGGCTTTTTGGTCTCAGAGGTCACAACGGAGGCTGttgaggagaaga
aggcccTGCTGGCGCGGTCTCCGGGAGGCGCAGACCCctttggggagggg
aacgggAGAGCCTCCTCACGGTCTGCAAGCGGGGGCCCGCGCATGTGCTC
ATGCTGAACAAGTTTCCGACCATGACggaccacctcctcctcgtcacggA
GGCCTGGCACCCGCAAGCAGGGCTCCTGCGCGCGGACGACCTGATTGCCT
GGTGGGAACTCCTCCGCGACGTCCCCGCCGTCGGCTTTTTCAACTCCGGC
CCCGAGGCAGGCGCAAGCCAAGGCCATCGGCACCTGCAAGCGATTCCTGT
CGACGCCCTAagtcttccatccctccctcccatccgtcccaccctccctg
tccctatGGACGTCCTCATCGGGCCCCACCttgcatcccttcctccccac
tccGCGCTCTCCACCTCTCAagtgctctccctccctttccggcACCGCAt
cgcacccctccctccctcacccacccCGGCCGAGCTCCAACGCGTCTACC
GGCGGCTCCTCGAGGAGAtcggggtggtggagatggggcAGGAAGTAGAG
GGAGGCCcgggcgtggaagaggaaaccaAGGCGCATAATCTCGTCATGAC
GAAGGAATGGCTCTTGGCTGTGCCTCGCTCACAAGCAAAGTATGCCGGCG
TGGATGTCAATGGGATGGCTTTCCTCGGTTGCTTGCTGTCGGGGGGCGCG
GAGACCACGCAAACGATCAAGCGATTCGGGCCTTTCAACATCCTCAAGGC
CGTCGTGCCCCCTTGA back to topCoding sequence (CDS) from alignment at KK037248.1:684970..686535+ >rna8441 ID=rna8441|Name=rna8441|organism=Nannochloropsis gaditana|type=CDS|length=3870bp|location=Sequence derived from alignment at KK037248.1:684970..686535+ (Nannochloropsis gaditana)
ATGTCCCAGCGCAAGCACGCAGGCGAAAAAATATATAAGATGGCAGAGGA
ATGTAAATCAGCCTCAGCCTGCCCACCCgtatcatcatcatcacaaCTTT
CGGACCCTGACGACAACAACAGTGAGTTCTCGAGATTCAGCACGGCCCGC
GGcggcccctccacctcctcgtcattccccacctcccttgtCTCTTCGTC
CGcagctcccgctctccctccccagacaTGGCAACCGATGGAGACTAGCA
CCACACAAGACCTGCATCGTCCGCATGCGAGTCCTGATTGGTGGTCGGAG
GCAAGTCAGAAAACCACGCAATGCCTGGATGTGGCTTCGGAACTCTTCGC
CGAGCATCGTCGTCTTGGTCTGGGTCTGGCGGCCCTCTTGATGTGTCTCG
GAATCTGGCTGAATGTAAACGGCAATGCCAACGGCGGGTTCacgggaggt
ggagcgtcGATAGCCCCAGAGGGAGCAGGCCtgtgggggaggcagggcca
ggaaggagaccTGCCATCGCCCCTTCGACGGCTCATCCAAGAGACTCGAG
CCCGGGCTCTTGGGGCTGAGGACCATCAAATGGGAAGCACAGGGGCTTCC
GCACCGGCCTTGCAGCCCTTGCCAACACAGAGAGAGTTTCCGACCATGAC
ggaccacctcctcctcgtcacggAGGCCTGGCACCCGCAAGCAGGGCTCC
TGCGCGCGGACGACCTGATTGCCTGGTGGGAACTCCTCCGCGACGTCCCC
GCCGTCGGCTTTTTCAACTCCGGCCCCGAGGCAGGCGCAAGCCAAGGCCA
TCGGCACCTGCAAGCGATTCCTGTCGACGCCCTAagtcttccatccctcc
ctcccatccgtcccaccctccctgtccctatGGACGTCCTCATCGGGCCC
CACCttgcatcccttcctccccactccGCGCTCTCCACCTCTCAagtgct
ctccctccctttccggcACCGCAtcgcacccctccctccctcacccaccc
CGGCCGAGCTCCAACGCGTCTACCGGCGGCTCCTCGAGGAGAtcggggtg
gtggagatggggcAGGAAGTAGAGGGAGGCCcgggcgtggaagaggaaac
caAGGCGCATAATCTCGTCATGACGAAGGAATGGCTCTTGGCTGTGCCTC
GCTCACAAGCAAAGTATGCCGGCGTGGATGTCAATGGGATGGCTTTCCTC
GGTTGCTTGCTGTCGGGGGGCGCGGAGACCACGCAAACGATCAAGCGATT
CGGGCCTTTCAACATCCTCAAGGCCGTCGTGCCCCCTTGAATGTCCCAGC
GCAAGCACGCAGGCGAAAAAATATATAAGATGGCAGAGGAATGTAAATCA
GCCTCAGCCTGCCCACCCgtatcatcatcatcacaaCTTTCGGACCCTGA
CGACAACAACAGTGAGTTCTCGAGATTCAGCACGGCCCGCGGcggcccct
ccacctcctcgtcattccccacctcccttgtCTCTTCGTCCGcagctccc
gctctccctccccagacaTGGCAACCGATGGAGACTAGCACCACACAAGA
CCTGCATCGTCCGCATGCGAGTCCTGATTGGTGGTCGGAGGCAAGTCAGA
AAACCACGCAATGCCTGGATGTGGCTTCGGAACTCTTCGCCGAGCATCGT
CGTCTTGGTCTGGGTCTGGCGGCCCTCTTGATGTGTCTCGGAATCTGGCT
GAATGTAAACGGCAATGCCAACGGCGGGTTCacgggaggtggagcgtcGA
TAGCCCCAGAGGGAGCAGGCCtgtgggggaggcagggccaggaaggagac
cTGCCATCGCCCCTTCGACGGCTCATCCAAGAGACTCGAGCCCGGGCTCT
TGGGGCTGAGGACCATCAAATGGGAAGCACAGGGGCTTCCGCACCGGCCT
TGCAGCCCTTGCCAACACAGAGAGAGTTTCCGACCATGACggaccacctc
ctcctcgtcacggAGGCCTGGCACCCGCAAGCAGGGCTCCTGCGCGCGGA
CGACCTGATTGCCTGGTGGGAACTCCTCCGCGACGTCCCCGCCGTCGGCT
TTTTCAACTCCGGCCCCGAGGCAGGCGCAAGCCAAGGCCATCGGCACCTG
CAAGCGATTCCTGTCGACGCCCTAagtcttccatccctccctcccatccg
tcccaccctccctgtccctatGGACGTCCTCATCGGGCCCCACCttgcat
cccttcctccccactccGCGCTCTCCACCTCTCAagtgctctccctccct
ttccggcACCGCAtcgcacccctccctccctcacccacccCGGCCGAGCT
CCAACGCGTCTACCGGCGGCTCCTCGAGGAGAtcggggtggtggagatgg
ggcAGGAAGTAGAGGGAGGCCcgggcgtggaagaggaaaccaAGGCGCAT
AATCTCGTCATGACGAAGGAATGGCTCTTGGCTGTGCCTCGCTCACAAGC
AAAGTATGCCGGCGTGGATGTCAATGGGATGGCTTTCCTCGGTTGCTTGC
TGTCGGGGGGCGCGGAGACCACGCAAACGATCAAGCGATTCGGGCCTTTC
AACATCCTCAAGGCCGTCGTGCCCCCTTGAATGTCCCAGCGCAAGCACGC
AGGCGAAAAAATATATAAGATGGCAGAGGAATGTAAATCAGCCTCAGCCT
GCCCACCCgtatcatcatcatcacaaCTTTCGGACCCTGACGACAACAAC
AGTGAGTTCTCGAGATTCAGCACGGCCCGCGGcggcccctccacctcctc
gtcattccccacctcccttgtCTCTTCGTCCGcagctcccgctctccctc
cccagacaTGGCAACCGATGGAGACTAGCACCACACAAGACCTGCATCGT
CCGCATGCGAGTCCTGATTGGTGGTCGGAGGCAAGTCAGAAAACCACGCA
ATGCCTGGATGTGGCTTCGGAACTCTTCGCCGAGCATCGTCGTCTTGGTC
TGGGTCTGGCGGCCCTCTTGATGTGTCTCGGAATCTGGCTGAATGTAAAC
GGCAATGCCAACGGCGGGTTCacgggaggtggagcgtcGATAGCCCCAGA
GGGAGCAGGCCtgtgggggaggcagggccaggaaggagaccTGCCATCGC
CCCTTCGACGGCTCATCCAAGAGACTCGAGCCCGGGCTCTTGGGGCTGAG
GACCATCAAATGGGAAGCACAGGGGCTTCCGCACCGGCCTTGCAGCCCTT
GCCAACACAGAGAGAGTTTCCGACCATGACggaccacctcctcctcgtca
cggAGGCCTGGCACCCGCAAGCAGGGCTCCTGCGCGCGGACGACCTGATT
GCCTGGTGGGAACTCCTCCGCGACGTCCCCGCCGTCGGCTTTTTCAACTC
CGGCCCCGAGGCAGGCGCAAGCCAAGGCCATCGGCACCTGCAAGCGATTC
CTGTCGACGCCCTAagtcttccatccctccctcccatccgtcccaccctc
cctgtccctatGGACGTCCTCATCGGGCCCCACCttgcatcccttcctcc
ccactccGCGCTCTCCACCTCTCAagtgctctccctccctttccggcACC
GCAtcgcacccctccctccctcacccacccCGGCCGAGCTCCAACGCGTC
TACCGGCGGCTCCTCGAGGAGAtcggggtggtggagatggggcAGGAAGT
AGAGGGAGGCCcgggcgtggaagaggaaaccaAGGCGCATAATCTCGTCA
TGACGAAGGAATGGCTCTTGGCTGTGCCTCGCTCACAAGCAAAGTATGCC
GGCGTGGATGTCAATGGGATGGCTTTCCTCGGTTGCTTGCTGTCGGGGGG
CGCGGAGACCACGCAAACGATCAAGCGATTCGGGCCTTTCAACATCCTCA
AGGCCGTCGTGCCCCCTTGA back to top
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