EWM22262.1, cds8414 (CDS) Nannochloropsis gaditana

Overview
NameEWM22262.1
Unique Namecds8414
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:684970..685036 +
Alignment locationKK037248.1:685134..685702 +
Alignment locationKK037248.1:685882..686535 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22262.1
Productap4a phosphorylase ii
Orig transcript idgnl|cribi|Naga_100376g5.1384.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:684970..685036 +
KK037248.1supercontigKK037248.1:685134..685702 +
KK037248.1supercontigKK037248.1:685882..686535 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:0003877ATP adenylyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR011146HIT-like
IPR019200ATP_adenylylTrfase_C
Homology
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|585102721|gb|EWM22262.1| (ap4a phosphorylase ii [Nannochloropsis gaditana])

HSP 1 Score: 867.84 bits (2241), Expect = 0.000e+0
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query:    1 MSQRKHAGEKIYKMAEECKSASACPPVSSSSQLSDPDDNNSEFSRFSTARGGPSTSSSFPTSLVSSSAAPALPPQTWQPMETSTTQDLHRPHASPDWWSEASQKTTQCLDVASELFAEHRRLGLGLAALLMCLGIWLNVNGNANGGFTGGGASIAPEGAGLWGRQGQEGDLPSPLRRLIQETRARALGAEDHQMGSTGASAPALQPLPTQREFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429
            MSQRKHAGEKIYKMAEECKSASACPPVSSSSQLSDPDDNNSEFSRFSTARGGPSTSSSFPTSLVSSSAAPALPPQTWQPMETSTTQDLHRPHASPDWWSEASQKTTQCLDVASELFAEHRRLGLGLAALLMCLGIWLNVNGNANGGFTGGGASIAPEGAGLWGRQGQEGDLPSPLRRLIQETRARALGAEDHQMGSTGASAPALQPLPTQREFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP
Sbjct:    1 MSQRKHAGEKIYKMAEECKSASACPPVSSSSQLSDPDDNNSEFSRFSTARGGPSTSSSFPTSLVSSSAAPALPPQTWQPMETSTTQDLHRPHASPDWWSEASQKTTQCLDVASELFAEHRRLGLGLAALLMCLGIWLNVNGNANGGFTGGGASIAPEGAGLWGRQGQEGDLPSPLRRLIQETRARALGAEDHQMGSTGASAPALQPLPTQREFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429          
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1210141275|dbj|BAY60376.1| (Ap4A phosphorylase II [Calothrix brevissima NIES-22])

HSP 1 Score: 135.191 bits (339), Expect = 7.311e-33
Identity = 78/220 (35.45%), Postives = 113/220 (51.36%), Query Frame = 0
Query:  211 REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPV-PMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429
             +F  +  HLL++T A+  Q  LL  +D  A W  L +   + F+N G  AGASQ H+HLQ +P+   +  +  PI P       + LI    A+LP            LPF+H  A L PS +      +YR LL+ +G+  +   ++ G        A+NL+ T+EW+L V RSQ +Y G+ VN + F G LL    E  Q +K+ GP NILK+V  P
Sbjct:  100 NKFNVVDHHLLIITRAFAEQESLLTREDFAAMWACLAEYDGLVFYNGGQVAGASQRHKHLQIVPLPLTTAGASVPIEPLFKAAKFENLI----ATLP-----------DLPFKHAFATLDPSYSATTTLELYRDLLQAVGITAIADNMQSG--------AYNLLATREWMLIVARSQEEYQGISVNSLGFAGALLVRNQEQMQLLKQQGPMNILKSVAIP 296          
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1210157726|dbj|BAY76812.1| (Ap4A phosphorylase II [Nostoc linckia NIES-25])

HSP 1 Score: 130.183 bits (326), Expect = 5.163e-31
Identity = 84/224 (37.50%), Postives = 113/224 (50.45%), Query Frame = 0
Query:  211 REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPP----SPTPA--ELQRVYRRLLEEIG--VVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAV 426
             +F  +  HLL++T A+  Q  LL  +D  A W  L D   +GF+NSG  AGASQ H+HLQ +P+   +  S  PI P L    +      +A+LP            LPF H  APL P    SP  A      +YR LL+ +G  V ++G              A+NL+MT+EW+L VPRSQ  +  + VN + F G LL   AE  Q +K  GP  ILK+V
Sbjct:  100 NKFNVVDYHLLIITRAFEEQESLLTLEDFTAMWACLADFDGLGFYNSGKIAGASQRHKHLQLVPLPLTASGSQTPIEPLL---REAQFHNSIATLP-----------KLPFLHAFAPLNPHWVESPFTAGEATAEIYRTLLDAVGLDVTQLG--------------AYNLLMTREWMLIVPRSQEHFHTISVNSLGFAGALLVKNAEEMQLLKDEGPMTILKSV 295          
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|938300492|gb|KPQ34054.1| (ATP adenylyltransferase [Phormidium sp. OSCR])

HSP 1 Score: 128.642 bits (322), Expect = 1.987e-30
Identity = 87/276 (31.52%), Postives = 128/276 (46.38%), Query Frame = 0
Query:  167 QEGDLPSPLRRLIQ-ETRARALGAEDHQMGSTGASAPALQPLPTQ--------------REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVV 427
            Q+G++   +R L   + +A+A  AE  Q  +TG       P   +               +F  +  HLL+VT  +  Q   L   D  A    LR++  +GF+N G EAGASQ H+HLQ IP+  +      PI   +        G       P            PF H IAP+ P  +P +LQ+ Y RLL  +G+++        P  E +T A+NL++T+ WL+ VPRSQ  +AG+ +N + F G LL       Q +K   P N+L  VV
Sbjct:   41 QQGEIRFLVRTLANIDRKAKAKAAETRQAEATGKPFNPFLPYDEKLFVANLSPSHVCLLNKFNVVEHHLLIVTREFEHQNTWLTLADFAALQVGLREIDGLGFYNGGTEAGASQPHKHLQLIPLPLMPDGDRLPIEGAIAQTEYAGTGLDKIGRSP----------GFPFNHAIAPISPDSSPEQLQQQYYRLLNAVGLID------ATPRTERQTGAYNLLITRNWLMVVPRSQEGFAGISLNALGFAGALLVRNEAQLQHLKTLQPLNLLANVV 300          
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1204967080|ref|WP_087709644.1| (phosphorylase [Phormidium sp. HE10JO])

HSP 1 Score: 127.487 bits (319), Expect = 6.056e-30
Identity = 88/279 (31.54%), Postives = 136/279 (48.75%), Query Frame = 0
Query:  167 QEGDLPSPLRRLIQ-ETRARALGAEDHQMGSTGASAPALQPLPTQ--------------REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLS---LPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVV 427
            Q+G++   +R L   + +A+A  AE  Q   TG       P   +               +F  +  HLL+VT  +  Q   L   D  A    LR++  +GF+N G +AGASQ H+HLQ +P     LP L P    LP+   +       +   +     +++     LPF H IAP+ P+ +P +LQ+ Y RLL  +G+++        P  E++T A+NL+ T++WL+ VPRSQ  +AG+ +N + F G LL       Q +K   P N+L  VV
Sbjct:   41 QQGEIRFLVRTLANIDRKAKAKAAETRQTQETGKPFNPFLPYDEKLFVADLSASHLCLLNKFNVVEHHLLMVTREFEHQNTWLTVADFAALQIGLREIDGLGFYNGGTDAGASQPHKHLQLVP-----LP-LMPDGDRLPIEAAI-------AQTEYDGTGLNKIGRSPWLPFTHAIAPISPNTSPEQLQQQYYRLLTAVGLID------ATPRTEQQTGAYNLLATRDWLMVVPRSQEGFAGISLNALGFAGALLVRDDAQLQQLKTLQPLNLLANVV 300          
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1197917951|ref|WP_086835750.1| (phosphorylase [Nostoc sp. RF31Y] >gi|1196000556|gb|OUL22867.1| phosphorylase [Nostoc sp. RF31Y])

HSP 1 Score: 127.102 bits (318), Expect = 1.003e-29
Identity = 80/225 (35.56%), Postives = 115/225 (51.11%), Query Frame = 0
Query:  211 REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPP----SP-TPAELQ-RVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429
             +F  +  HLL++T A+  Q  LL  +D  A W  L +   + F+N G  AGASQ H+HLQ +P        LP     + +P++    P  A+     A++T  +  LPF H  APL P    SP T AE   ++Y  LL  +G+  +    + G        A+N + T+EW+L VPRSQ ++A + VN + F G LL    E  Q +K  GP NILK+V  P
Sbjct:  100 NKFNVVDYHLLIITRAFEEQESLLMLEDFAAMWACLAEYDGLAFYNGGQVAGASQRHKHLQVVP--------LPLTTSEVAIPIE----PLFAAAEFQGAIAT--IPGLPFTHAFAPLNPDWAESPFTAAEATLKLYHALLTAVGITAVNGNRQSG--------AYNFLATREWMLIVPRSQEEFAAISVNSLGFAGALLVRNQEQMQILKEQGPMNILKSVAIP 302          
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1197828521|ref|WP_086763514.1| (phosphorylase [Nostoc sp. 106C] >gi|1196004833|gb|OUL27005.1| phosphorylase [Nostoc sp. 106C])

HSP 1 Score: 127.102 bits (318), Expect = 1.045e-29
Identity = 78/225 (34.67%), Postives = 112/225 (49.78%), Query Frame = 0
Query:  211 REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPP----SPTPA--ELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429
             +F  +  HLL++T A+  Q  LL  +D  A W  L +   + F+N G  AGASQ H+HLQ +P        LP     + +P++    P  A+     A++T  +  LPF H  APL P    SP  A      +Y  LL  +G+  +    + G        A+N + T+EW+L VPRSQ ++A + VN + F G LL    E  Q +K  GP NILK+V  P
Sbjct:  100 NKFNVVDYHLLIITRAFEEQESLLTLEDFAAMWACLAEYDGLAFYNGGQVAGASQRHKHLQVVP--------LPLTTSEVAIPIE----PLFAAAEFQGAIAT--IPGLPFTHAFAPLNPDWAESPFTAAKTTLELYHALLNAVGITAVDDNKQSG--------AYNFLATREWMLIVPRSQEEFAAISVNSLGFAGALLVRNQEQMQILKEHGPMNILKSVAIP 302          
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1196939484|ref|WP_086370973.1| (phosphorylase [Leptolyngbya boryana] >gi|932874711|dbj|BAS54763.1| ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Leptolyngbya boryana IAM M-101] >gi|932881351|dbj|BAS61111.1| ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Leptolyngbya boryana dg5] >gi|1210139998|dbj|BAY59103.1| Ap4A phosphorylase II [Leptolyngbya boryana NIES-2135])

HSP 1 Score: 125.561 bits (314), Expect = 2.683e-29
Identity = 75/215 (34.88%), Postives = 108/215 (50.23%), Query Frame = 0
Query:  212 EFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAV 426
            +F  + +HLL+VT A+  Q  LL   D  A W  L +V  + F+N+G  AGASQ H+HLQ +P         P  +    VP+D LI          S    +Q+    F H  A   P  TP ++ + Y  LLE +G +   + ++  P        +NL+ T+EW+L VPRSQ  + G+ VN +AF G LL    E  +T+K+  P N LK V
Sbjct:  103 KFNVVDNHLLIVTRAFEEQEALLTLHDFTAMWACLSEVDGLAFYNAGKAAGASQRHKHLQLVP--------FPMEKEIDRVPIDPLIK------KVRSRDRITQIPEFSFLHAFARFEPETTPEDILQHYYELLETVG-IRSNRVMQSAP--------YNLLATREWMLIVPRSQPGFGGIGVNSLAFAGALLVQTPEQLETLKQLRPLNFLKNV 294          
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|515860101|ref|WP_017290729.1| (hypothetical protein [Leptolyngbya boryana])

HSP 1 Score: 125.561 bits (314), Expect = 3.063e-29
Identity = 75/215 (34.88%), Postives = 108/215 (50.23%), Query Frame = 0
Query:  212 EFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAV 426
            +F  + +HLL+VT A+  Q  LL   D  A W  L +V  + F+N+G  AGASQ H+HLQ +P         P  +    VP+D LI          S    +Q+    F H  A   P  TP ++ + Y  LLE +G +   + ++  P        +NL+ T+EW+L VPRSQ  + G+ VN +AF G LL    E  +T+K+  P N LK V
Sbjct:  103 KFNVVDNHLLIVTRAFEEQEALLTLHDFTAMWACLSEVDGLAFYNAGKAAGASQRHKHLQLVP--------FPMEKEIDRVPIDPLIK------KVRSRDRITQIPEFSFLHAFARFEPETTPEDILQHYYELLETVG-IRSNRVMQSAP--------YNLLATREWMLIVPRSQPGFGGIGVNSLAFAGALLVQTPEQLETLKQLRPLNFLKNV 294          
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1056976807|ref|WP_068389055.1| (phosphorylase [Leptolyngbya sp. NIES-3755] >gi|965634821|dbj|BAU14393.1| Ap4A phosphorylase II [Leptolyngbya sp. NIES-3755])

HSP 1 Score: 125.561 bits (314), Expect = 3.067e-29
Identity = 75/217 (34.56%), Postives = 108/217 (49.77%), Query Frame = 0
Query:  212 EFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALST--SQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAV 426
            +F  + +HLL++T A+  Q  LL   D  A W  L +V  + F+N+G  AGASQ H+HLQ +P         P I+    +P+D LI         HS  S+  + +   PF H    L    TP +L   Y  LLE + +          P    +T  +N + T+EW++ VPRSQA+Y  + VN +AF G LL    E  +T+K+  P N LK V
Sbjct:  102 KFNVVENHLLIITRAFEEQEALLTLSDFTAMWACLSEVDGLAFYNAGSVAGASQRHKHLQLVP--------FPFIKEGDRLPIDPLI---------HSVNSSDIAVISDFPFVHAFKKLENITTPEQLLICYSELLETVKI---------DPHQPIQTAPYNFLATREWMMIVPRSQAEYRAIAVNSLAFAGALLVRNTEQLETLKQLRPLNFLKNV 292          
The following BLAST results are available for this feature:
BLAST of EWM22262.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102721|gb|EWM22262.1|0.000e+0100.00ap4a phosphorylase ii [Nannochloropsis gaditana][more]
gi|1210141275|dbj|BAY60376.1|7.311e-3335.45Ap4A phosphorylase II [Calothrix brevissima NIES-2... [more]
gi|1210157726|dbj|BAY76812.1|5.163e-3137.50Ap4A phosphorylase II [Nostoc linckia NIES-25][more]
gi|938300492|gb|KPQ34054.1|1.987e-3031.52ATP adenylyltransferase [Phormidium sp. OSCR][more]
gi|1204967080|ref|WP_087709644.1|6.056e-3031.54phosphorylase [Phormidium sp. HE10JO][more]
gi|1197917951|ref|WP_086835750.1|1.003e-2935.56phosphorylase [Nostoc sp. RF31Y] >gi|1196000556|gb... [more]
gi|1197828521|ref|WP_086763514.1|1.045e-2934.67phosphorylase [Nostoc sp. 106C] >gi|1196004833|gb|... [more]
gi|1196939484|ref|WP_086370973.1|2.683e-2934.88phosphorylase [Leptolyngbya boryana] >gi|932874711... [more]
gi|515860101|ref|WP_017290729.1|3.063e-2934.88hypothetical protein [Leptolyngbya boryana][more]
gi|1056976807|ref|WP_068389055.1|3.067e-2934.56phosphorylase [Leptolyngbya sp. NIES-3755] >gi|965... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8441rna8441Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications