EWM22262.1, cds8414 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|585102721|gb|EWM22262.1| (ap4a phosphorylase ii [Nannochloropsis gaditana]) HSP 1 Score: 867.84 bits (2241), Expect = 0.000e+0 Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query: 1 MSQRKHAGEKIYKMAEECKSASACPPVSSSSQLSDPDDNNSEFSRFSTARGGPSTSSSFPTSLVSSSAAPALPPQTWQPMETSTTQDLHRPHASPDWWSEASQKTTQCLDVASELFAEHRRLGLGLAALLMCLGIWLNVNGNANGGFTGGGASIAPEGAGLWGRQGQEGDLPSPLRRLIQETRARALGAEDHQMGSTGASAPALQPLPTQREFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429
MSQRKHAGEKIYKMAEECKSASACPPVSSSSQLSDPDDNNSEFSRFSTARGGPSTSSSFPTSLVSSSAAPALPPQTWQPMETSTTQDLHRPHASPDWWSEASQKTTQCLDVASELFAEHRRLGLGLAALLMCLGIWLNVNGNANGGFTGGGASIAPEGAGLWGRQGQEGDLPSPLRRLIQETRARALGAEDHQMGSTGASAPALQPLPTQREFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP
Sbjct: 1 MSQRKHAGEKIYKMAEECKSASACPPVSSSSQLSDPDDNNSEFSRFSTARGGPSTSSSFPTSLVSSSAAPALPPQTWQPMETSTTQDLHRPHASPDWWSEASQKTTQCLDVASELFAEHRRLGLGLAALLMCLGIWLNVNGNANGGFTGGGASIAPEGAGLWGRQGQEGDLPSPLRRLIQETRARALGAEDHQMGSTGASAPALQPLPTQREFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1210141275|dbj|BAY60376.1| (Ap4A phosphorylase II [Calothrix brevissima NIES-22]) HSP 1 Score: 135.191 bits (339), Expect = 7.311e-33 Identity = 78/220 (35.45%), Postives = 113/220 (51.36%), Query Frame = 0
Query: 211 REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPV-PMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429
+F + HLL++T A+ Q LL +D A W L + + F+N G AGASQ H+HLQ +P+ + + PI P + LI A+LP LPF+H A L PS + +YR LL+ +G+ + ++ G A+NL+ T+EW+L V RSQ +Y G+ VN + F G LL E Q +K+ GP NILK+V P
Sbjct: 100 NKFNVVDHHLLIITRAFAEQESLLTREDFAAMWACLAEYDGLVFYNGGQVAGASQRHKHLQIVPLPLTTAGASVPIEPLFKAAKFENLI----ATLP-----------DLPFKHAFATLDPSYSATTTLELYRDLLQAVGITAIADNMQSG--------AYNLLATREWMLIVARSQEEYQGISVNSLGFAGALLVRNQEQMQLLKQQGPMNILKSVAIP 296
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1210157726|dbj|BAY76812.1| (Ap4A phosphorylase II [Nostoc linckia NIES-25]) HSP 1 Score: 130.183 bits (326), Expect = 5.163e-31 Identity = 84/224 (37.50%), Postives = 113/224 (50.45%), Query Frame = 0
Query: 211 REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPP----SPTPA--ELQRVYRRLLEEIG--VVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAV 426
+F + HLL++T A+ Q LL +D A W L D +GF+NSG AGASQ H+HLQ +P+ + S PI P L + +A+LP LPF H APL P SP A +YR LL+ +G V ++G A+NL+MT+EW+L VPRSQ + + VN + F G LL AE Q +K GP ILK+V
Sbjct: 100 NKFNVVDYHLLIITRAFEEQESLLTLEDFTAMWACLADFDGLGFYNSGKIAGASQRHKHLQLVPLPLTASGSQTPIEPLL---REAQFHNSIATLP-----------KLPFLHAFAPLNPHWVESPFTAGEATAEIYRTLLDAVGLDVTQLG--------------AYNLLMTREWMLIVPRSQEHFHTISVNSLGFAGALLVKNAEEMQLLKDEGPMTILKSV 295
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|938300492|gb|KPQ34054.1| (ATP adenylyltransferase [Phormidium sp. OSCR]) HSP 1 Score: 128.642 bits (322), Expect = 1.987e-30 Identity = 87/276 (31.52%), Postives = 128/276 (46.38%), Query Frame = 0
Query: 167 QEGDLPSPLRRLIQ-ETRARALGAEDHQMGSTGASAPALQPLPTQ--------------REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVV 427
Q+G++ +R L + +A+A AE Q +TG P + +F + HLL+VT + Q L D A LR++ +GF+N G EAGASQ H+HLQ IP+ + PI + G P PF H IAP+ P +P +LQ+ Y RLL +G+++ P E +T A+NL++T+ WL+ VPRSQ +AG+ +N + F G LL Q +K P N+L VV
Sbjct: 41 QQGEIRFLVRTLANIDRKAKAKAAETRQAEATGKPFNPFLPYDEKLFVANLSPSHVCLLNKFNVVEHHLLIVTREFEHQNTWLTLADFAALQVGLREIDGLGFYNGGTEAGASQPHKHLQLIPLPLMPDGDRLPIEGAIAQTEYAGTGLDKIGRSP----------GFPFNHAIAPISPDSSPEQLQQQYYRLLNAVGLID------ATPRTERQTGAYNLLITRNWLMVVPRSQEGFAGISLNALGFAGALLVRNEAQLQHLKTLQPLNLLANVV 300
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1204967080|ref|WP_087709644.1| (phosphorylase [Phormidium sp. HE10JO]) HSP 1 Score: 127.487 bits (319), Expect = 6.056e-30 Identity = 88/279 (31.54%), Postives = 136/279 (48.75%), Query Frame = 0
Query: 167 QEGDLPSPLRRLIQ-ETRARALGAEDHQMGSTGASAPALQPLPTQ--------------REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLS---LPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVV 427
Q+G++ +R L + +A+A AE Q TG P + +F + HLL+VT + Q L D A LR++ +GF+N G +AGASQ H+HLQ +P LP L P LP+ + + + +++ LPF H IAP+ P+ +P +LQ+ Y RLL +G+++ P E++T A+NL+ T++WL+ VPRSQ +AG+ +N + F G LL Q +K P N+L VV
Sbjct: 41 QQGEIRFLVRTLANIDRKAKAKAAETRQTQETGKPFNPFLPYDEKLFVADLSASHLCLLNKFNVVEHHLLMVTREFEHQNTWLTVADFAALQIGLREIDGLGFYNGGTDAGASQPHKHLQLVP-----LP-LMPDGDRLPIEAAI-------AQTEYDGTGLNKIGRSPWLPFTHAIAPISPNTSPEQLQQQYYRLLTAVGLID------ATPRTEQQTGAYNLLATRDWLMVVPRSQEGFAGISLNALGFAGALLVRDDAQLQQLKTLQPLNLLANVV 300
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1197917951|ref|WP_086835750.1| (phosphorylase [Nostoc sp. RF31Y] >gi|1196000556|gb|OUL22867.1| phosphorylase [Nostoc sp. RF31Y]) HSP 1 Score: 127.102 bits (318), Expect = 1.003e-29 Identity = 80/225 (35.56%), Postives = 115/225 (51.11%), Query Frame = 0
Query: 211 REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPP----SP-TPAELQ-RVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429
+F + HLL++T A+ Q LL +D A W L + + F+N G AGASQ H+HLQ +P LP + +P++ P A+ A++T + LPF H APL P SP T AE ++Y LL +G+ + + G A+N + T+EW+L VPRSQ ++A + VN + F G LL E Q +K GP NILK+V P
Sbjct: 100 NKFNVVDYHLLIITRAFEEQESLLMLEDFAAMWACLAEYDGLAFYNGGQVAGASQRHKHLQVVP--------LPLTTSEVAIPIE----PLFAAAEFQGAIAT--IPGLPFTHAFAPLNPDWAESPFTAAEATLKLYHALLTAVGITAVNGNRQSG--------AYNFLATREWMLIVPRSQEEFAAISVNSLGFAGALLVRNQEQMQILKEQGPMNILKSVAIP 302
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1197828521|ref|WP_086763514.1| (phosphorylase [Nostoc sp. 106C] >gi|1196004833|gb|OUL27005.1| phosphorylase [Nostoc sp. 106C]) HSP 1 Score: 127.102 bits (318), Expect = 1.045e-29 Identity = 78/225 (34.67%), Postives = 112/225 (49.78%), Query Frame = 0
Query: 211 REFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPP----SPTPA--ELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAVVPP 429
+F + HLL++T A+ Q LL +D A W L + + F+N G AGASQ H+HLQ +P LP + +P++ P A+ A++T + LPF H APL P SP A +Y LL +G+ + + G A+N + T+EW+L VPRSQ ++A + VN + F G LL E Q +K GP NILK+V P
Sbjct: 100 NKFNVVDYHLLIITRAFEEQESLLTLEDFAAMWACLAEYDGLAFYNGGQVAGASQRHKHLQVVP--------LPLTTSEVAIPIE----PLFAAAEFQGAIAT--IPGLPFTHAFAPLNPDWAESPFTAAKTTLELYHALLNAVGITAVDDNKQSG--------AYNFLATREWMLIVPRSQEEFAAISVNSLGFAGALLVRNQEQMQILKEHGPMNILKSVAIP 302
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1196939484|ref|WP_086370973.1| (phosphorylase [Leptolyngbya boryana] >gi|932874711|dbj|BAS54763.1| ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Leptolyngbya boryana IAM M-101] >gi|932881351|dbj|BAS61111.1| ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Leptolyngbya boryana dg5] >gi|1210139998|dbj|BAY59103.1| Ap4A phosphorylase II [Leptolyngbya boryana NIES-2135]) HSP 1 Score: 125.561 bits (314), Expect = 2.683e-29 Identity = 75/215 (34.88%), Postives = 108/215 (50.23%), Query Frame = 0
Query: 212 EFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAV 426
+F + +HLL+VT A+ Q LL D A W L +V + F+N+G AGASQ H+HLQ +P P + VP+D LI S +Q+ F H A P TP ++ + Y LLE +G + + ++ P +NL+ T+EW+L VPRSQ + G+ VN +AF G LL E +T+K+ P N LK V
Sbjct: 103 KFNVVDNHLLIVTRAFEEQEALLTLHDFTAMWACLSEVDGLAFYNAGKAAGASQRHKHLQLVP--------FPMEKEIDRVPIDPLIK------KVRSRDRITQIPEFSFLHAFARFEPETTPEDILQHYYELLETVG-IRSNRVMQSAP--------YNLLATREWMLIVPRSQPGFGGIGVNSLAFAGALLVQTPEQLETLKQLRPLNFLKNV 294
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|515860101|ref|WP_017290729.1| (hypothetical protein [Leptolyngbya boryana]) HSP 1 Score: 125.561 bits (314), Expect = 3.063e-29 Identity = 75/215 (34.88%), Postives = 108/215 (50.23%), Query Frame = 0
Query: 212 EFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALSTSQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAV 426
+F + +HLL+VT A+ Q LL D A W L +V + F+N+G AGASQ H+HLQ +P P + VP+D LI S +Q+ F H A P TP ++ + Y LLE +G + + ++ P +NL+ T+EW+L VPRSQ + G+ VN +AF G LL E +T+K+ P N LK V
Sbjct: 103 KFNVVDNHLLIVTRAFEEQEALLTLHDFTAMWACLSEVDGLAFYNAGKAAGASQRHKHLQLVP--------FPMEKEIDRVPIDPLIK------KVRSRDRITQIPEFSFLHAFARFEPETTPEDILQHYYELLETVG-IRSNRVMQSAP--------YNLLATREWMLIVPRSQPGFGGIGVNSLAFAGALLVQTPEQLETLKQLRPLNFLKNV 294
BLAST of EWM22262.1 vs. NCBI_GenBank
Match: gi|1056976807|ref|WP_068389055.1| (phosphorylase [Leptolyngbya sp. NIES-3755] >gi|965634821|dbj|BAU14393.1| Ap4A phosphorylase II [Leptolyngbya sp. NIES-3755]) HSP 1 Score: 125.561 bits (314), Expect = 3.067e-29 Identity = 75/217 (34.56%), Postives = 108/217 (49.77%), Query Frame = 0
Query: 212 EFPTMTDHLLLVTEAWHPQAGLLRADDLIAWWELLRDVPAVGFFNSGPEAGASQGHRHLQAIPVDALSLPSLPPIRPTLPVPMDVLIGPHLASLPPHSALST--SQVLSLPFRHRIAPLPPSPTPAELQRVYRRLLEEIGVVEMGQEVEGGPGVEEETKAHNLVMTKEWLLAVPRSQAKYAGVDVNGMAFLGCLLSGGAETTQTIKRFGPFNILKAV 426
+F + +HLL++T A+ Q LL D A W L +V + F+N+G AGASQ H+HLQ +P P I+ +P+D LI HS S+ + + PF H L TP +L Y LLE + + P +T +N + T+EW++ VPRSQA+Y + VN +AF G LL E +T+K+ P N LK V
Sbjct: 102 KFNVVENHLLIITRAFEEQEALLTLSDFTAMWACLSEVDGLAFYNAGSVAGASQRHKHLQLVP--------FPFIKEGDRLPIDPLI---------HSVNSSDIAVISDFPFVHAFKKLENITTPEQLLICYSELLETVKI---------DPHQPIQTAPYNFLATREWMMIVPRSQAEYRAIAVNSLAFAGALLVRNTEQLETLKQLRPLNFLKNV 292 The following BLAST results are available for this feature:
BLAST of EWM22262.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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