rna8438, rna8438 (mRNA) Nannochloropsis gaditana

Overview
Namerna8438
Unique Namerna8438
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length972
Alignment locationKK037248.1:678693..680054 -

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Properties
Property NameValue
Productglutathione s-transferase-like protein
Orig transcript idgnl|cribi|Naga_100376g2.1380.mrna
Orig protein idgnl|cribi|Naga_100376g2.1380
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:678693..680054 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100376g2gene8179Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8438rna8438-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22258.1cds8411Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8438 ID=rna8438|Name=rna8438|organism=Nannochloropsis gaditana|type=mRNA|length=972bp
GAAACAGGGGCACGCTTACCATGCCTTCGTCTCTCTCATCGTCGGCATGC
AAAACTTCAGCGGTTGCAGGAAGAAGCGAGAGTGCCAAAGAGGAGGAGGA
GGAAGAGGAGTTTGAGGTACGTGGCGTTCGGTTGATATGACTCTATACTT
CATTATTCTTTAATCACCTTCGTCCCTTTGCGGCTATGCTCCCACAAGAC
TTGAGGCTCGCAGAGAAAGGAAAAACTTGTGGAGGTATCATTTTTCACCC
CTCTCAAAGAGTGTGCCATCCACTTTTTATCCTCTTTCGCTCCTGTATCA
AAGGTATTTGTCATGAAGGAAGATTTCAAGTTTCATTGTGCGCACTTCGT
CGCTTTCAAGGGATATAGAGAGAGGCTTCATGGACATAATTATACGGTCG
GCGTCCGGATGCGGGGAACCAGACGGGGACATGACGGGTATCTGATCGAC
TTTGGAGACATCAAGCTCGTCACCCGCGCCCTCTGCAAGGAGCTCAACGA
ACGCTTCCTCTGCCCCACTCGGAGCGACGTGATCCAGATCGACGTGGAGG
GGCCTCGCATCAGTCTCGCCTGCGAAGATGGGGCCCTCTTTGTCCTCCCC
ACCGCCGACTGCGCGATGCTCCCGGTCGTCCACAGCACGGCGGAGGAACT
CGCGCAATATTTCTGGCACCGACTGACAACCAGCTTTAGTGTGGATCGAT
TGCTCTCGCGGGGCATCCACACCTTGCAGATCATGGTGGCGGAGGCCCCC
AGGCAAGAAGGCTGCTACACCCGGCGACTCACGTCCCCGCCCTTGTCCTT
CTTGGACGAGGGGTTGGGGGGGAGGGCGGCCGAGGTCCTGAAGCCGAAGC
CGTGTATAGGGAGGAATGAAGTCGGCGATGGACAGGGGGGAGACGGAGGG
AAAGAGCGAGAGGAGGGAGAGCGCCGGGACAGTGGCCTTGAGGGTGTCGA
GGGATGGGACCAACTAAAGTAA
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protein sequence of rna8438

>rna8438-protein ID=rna8438-protein|Name=rna8438|organism=Nannochloropsis gaditana|type=polypeptide|length=318bp
MPPPAGLLACFLIIVIMASSRFAHAFAAATKPQPKVRLWNSGTCPYAQRA
WLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTR
DLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTR
PPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMV
MDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVL
DMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLLEMMKPGGG
GAGAGGGAGGATGSTSSK
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mRNA from alignment at KK037248.1:678693..680054-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8438 ID=rna8438|Name=rna8438|organism=Nannochloropsis gaditana|type=mRNA|length=1362bp|location=Sequence derived from alignment at KK037248.1:678693..680054- (Nannochloropsis gaditana)
CAGGGAGGTATCTTGACTATGGAAGTGGTCTGTGCCGTTAACGCAAGGCC
ATAATCGCGTACCCTACATGCACTAGTACACAGAGTGTTGGCACATAGAG
TGTGGCACCCCCCTCTCACTCGGTACTTGTTATTTATGCCTCCTCCCGCC
GGTCTCCTGGCTTGCTTCCTCATCATAGTCATCATGGCAAGCTCAAGGTT
TGCTCATGCTTTTGCTGCTGCAACCAAACCTCAACCGAAGGTTCGTGATT
AGATTTTCATTGTTCGGACAAGTCCTCTTATGTCAAGAGGGTTCCATGCA
AGATAATCTTCGCTTTTGTGATGCATTCGTTGCTCTCGATTCTATCCTAA
TCCATAACGCTCTCGAAATTACCTTCTCAGGTTCGTTTATGGAATAGCGG
TACCTGTCCTTATGCTCAACGCGCCTGGTTGGCTCTTCTTGAGAAAGGCG
TAGAATTTGAGCATAAGATCGTGGACCTCCAAAATAAGCCGGAAGATTTC
GTCGAATTGTATGCCTCGCTGCACCCTGATCCGAGCGCCAGGGCTAAGGT
GCCTATTTTAGAGCACTGTACCCGGGATCTTGAAGAGGAAGTCCCGCCAC
CCACTCCCTCCACCTTTCCTACTGTTTCGTCTCTTTACGACGTCCAAGTC
ATCGAATCCAACGTGTGTGCCGAGTACATCGCCGAGGCCTTCCCCGACCA
GGGCCACTCCCTGCTTCCCACCCGACCACCTGACAAGGCGAACATGCGGC
TGTTGGGAGAGATCTGGCAGACATCAGGGATGGGCAGCTACTTCCCTATC
CTGTTGGCGGCCAGGGACGGCGACCAGGCGCGCCTCGATCAGGAGCTCAC
GAAGTTGAAGGCAGGGATGATGGTGATGGACAGGTTCCTCTGCCAGTACG
GGGCGGACCCTGCGAAGACCCCTTTCTTCCTTGAGAGCGGGTTTTGCTTG
GGCGAGGTGTGCCTGGCGCCTTTCGTGCAGCGCTTGCTGGTGACCTTGCC
GCATTGGGTCGGGGTCGACGTGCTCGATATGGCCGAGGAGGAAGGGTGTC
GGAGACTGAGGCGGTGGATGCAGGCGCTGGCCGAGCGACCCTCCACGGTG
GCCTCCGGAGGCTCTAAAGAGGAGACTATCAAAAATTTTACGAGGCTGCT
GGAGATGATGAAGCCGGGAGGAGGTGGAGCGGGAGCGGGGGGAGGGGCGG
GAGGGGCAACAGGCAGCACGAGCTCGAAGTGAGGTGAGAGGAGTAGAGAA
GAGAGGAGGATAATCTCAACGAGGAGGATGATATTCGTAAGCCTCAGCTG
AATCGAATTGACTACGGAGTACTCGCTTGGCATAAAGATGAAAAGGCGCT
TCCGCTTGTTGA
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Coding sequence (CDS) from alignment at KK037248.1:678693..680054-

>rna8438 ID=rna8438|Name=rna8438|organism=Nannochloropsis gaditana|type=CDS|length=1914bp|location=Sequence derived from alignment at KK037248.1:678693..680054- (Nannochloropsis gaditana)
GTTCGTTTATGGAATAGCGGTACCTGTCCTTATGCTCAACGCGCCTGGTT
GGCTCTTCTTGAGAAAGGCGTAGAATTTGAGCATAAGATCGTGGACCTCC
AAAATAAGCCGGAAGATTTCGTCGAATTGTATGCCTCGCTGCACCCTGAT
CCGAGCGCCAGGGCTAAGGTGCCTATTTTAGAGCACTGTACCCGGGATCT
TGAAGAGGAAGTCCCGCCACCCACTCCCTCCACCTTTCCTACTGTTTCGT
CTCTTTACGACGTCCAAGTCATCGAATCCAACGTGTGTGCCGAGTACATC
GCCGAGGCCTTCCCCGACCAGGGCCACTCCCTGCTTCCCACCCGACCACC
TGACAAGGCGAACATGCGGCTGTTGGGAGAGATCTGGCAGACATCAGGGA
TGGGCAGCTACTTCCCTATCCTGTTGGCGGCCAGGGACGGCGACCAGGCG
CGCCTCGATCAGGAGCTCACGAAGTTGAAGGCAGGGATGATGGTGATGGA
CAGGTTCCTCTGCCAGTACGGGGCGGACCCTGCGAAGACCCCTTTCTTCC
TTGAGAGCGGGTTTTGCTTGGGCGAGGTGTGCCTGGCGCCTTTCGTGCAG
CGCTTGCTGGTGACCTTGCCGCATTGGGTCGGGGTCGACGTGCTCGATAT
GGCCGAGGAGGAAGGGTGTCGGAGACTGAGGCGGTGGATGCAGGCGCTGG
CCGAGCGACCCTCCACGGTGGCCTCCGGAGGCTCTAAAGAGGAGACTATC
AAAAATTTTACGAGGCTGCTGGAGATGATGAAGCCGGGAGGAGGTGGAGC
GGGAGCGGGGGGAGGGGCGGGAGGGGCAACAGGCAGCACGAGCTCGAAGT
GAATGCCTCCTCCCGCCGGTCTCCTGGCTTGCTTCCTCATCATAGTCATC
ATGGCAAGCTCAAGGTTTGCTCATGCTTTTGCTGCTGCAACCAAACCTCA
ACCGAAGGTTCGTTTATGGAATAGCGGTACCTGTCCTTATGCTCAACGCG
CCTGGTTGGCTCTTCTTGAGAAAGGCGTAGAATTTGAGCATAAGATCGTG
GACCTCCAAAATAAGCCGGAAGATTTCGTCGAATTGTATGCCTCGCTGCA
CCCTGATCCGAGCGCCAGGGCTAAGGTGCCTATTTTAGAGCACTGTACCC
GGGATCTTGAAGAGGAAGTCCCGCCACCCACTCCCTCCACCTTTCCTACT
GTTTCGTCTCTTTACGACGTCCAAGTCATCGAATCCAACGTGTGTGCCGA
GTACATCGCCGAGGCCTTCCCCGACCAGGGCCACTCCCTGCTTCCCACCC
GACCACCTGACAAGGCGAACATGCGGCTGTTGGGAGAGATCTGGCAGACA
TCAGGGATGGGCAGCTACTTCCCTATCCTGTTGGCGGCCAGGGACGGCGA
CCAGGCGCGCCTCGATCAGGAGCTCACGAAGTTGAAGGCAGGGATGATGG
TGATGGACAGGTTCCTCTGCCAGTACGGGGCGGACCCTGCGAAGACCCCT
TTCTTCCTTGAGAGCGGGTTTTGCTTGGGCGAGGTGTGCCTGGCGCCTTT
CGTGCAGCGCTTGCTGGTGACCTTGCCGCATTGGGTCGGGGTCGACGTGC
TCGATATGGCCGAGGAGGAAGGGTGTCGGAGACTGAGGCGGTGGATGCAG
GCGCTGGCCGAGCGACCCTCCACGGTGGCCTCCGGAGGCTCTAAAGAGGA
GACTATCAAAAATTTTACGAGGCTGCTGGAGATGATGAAGCCGGGAGGAG
GTGGAGCGGGAGCGGGGGGAGGGGCGGGAGGGGCAACAGGCAGCACGAGC
TCGAAGTGAATGCCTCCTCCCGCCGGTCTCCTGGCTTGCTTCCTCATCAT
AGTCATCATGGCAAGCTCAAGGTTTGCTCATGCTTTTGCTGCTGCAACCA
AACCTCAACCGAAG
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Synonyms
Publications