EWM22258.1, cds8411 (CDS) Nannochloropsis gaditana

Overview
NameEWM22258.1
Unique Namecds8411
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:679815..679919 -
Alignment locationKK037248.1:678823..679674 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22258.1
Productglutathione s-transferase-like protein
Orig transcript idgnl|cribi|Naga_100376g2.1380.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:679815..679919 -
KK037248.1supercontigKK037248.1:678823..679674 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR010987Glutathione-S-Trfase_C-like
IPR004045Glutathione_S-Trfase_N
IPR012336Thioredoxin-like_fold
Homology
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|585102717|gb|EWM22258.1| (glutathione s-transferase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 655.596 bits (1690), Expect = 0.000e+0
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
Query:    1 MPPPAGLLACFLIIVIMASSRFAHAFAAATKPQPKVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLLEMMKPGGGGAGAGGGAGGATGSTSSK 318
            MPPPAGLLACFLIIVIMASSRFAHAFAAATKPQPKVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLLEMMKPGGGGAGAGGGAGGATGSTSSK
Sbjct:    1 MPPPAGLLACFLIIVIMASSRFAHAFAAATKPQPKVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLLEMMKPGGGGAGAGGGAGGATGSTSSK 318          
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|545353761|ref|XP_005642716.1| (glutathione S-transferase [Coccomyxa subellipsoidea C-169] >gi|384244673|gb|EIE18172.1| glutathione S-transferase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 138.658 bits (348), Expect = 7.658e-36
Identity = 84/252 (33.33%), Postives = 129/252 (51.19%), Query Frame = 0
Query:   42 GTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHS-LLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
            G CP+AQRAWL L E G+ +EHK+ D  NKP++F +LYAS+  +    AKVP +                          D ++ ES V  EY+   +   G + ++P  P   A ++L  E++ +     +F IL A  D + A+L QE       + V+D F+   G++     +FL   +   E    PFV+R LVTLPH+ GVD L++A+ +G  RL  W+QA  +R S   +G S E  I++F + +
Sbjct:   19 GGCPFAQRAWLTLEELGIPYEHKLADPANKPKEFTDLYASIVQNTDDSAKVPTIIDG-----------------------DEKLTESLVVVEYLDAKY--GGDTPIIPRDPAQLAKVKLFVELFSSKFQTPFFKILRAGSDDELAQLKQEFAH---NLEVLDNFIKASGSEGGG--YFLGERYSFAETVTTPFVRRALVTLPHFKGVDPLEIAKSKGLDRLVAWIQASMDRESNKKTGPSDEAIIESFKKFI 240          
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|552826362|ref|XP_005847002.1| (hypothetical protein CHLNCDRAFT_135021 [Chlorella variabilis] >gi|307106655|gb|EFN54900.1| hypothetical protein CHLNCDRAFT_135021 [Chlorella variabilis])

HSP 1 Score: 131.724 bits (330), Expect = 3.128e-33
Identity = 87/254 (34.25%), Postives = 131/254 (51.57%), Query Frame = 0
Query:   39 WNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
            ++S TCPYAQR+W+ LLEKG+ FE ++VDL +K E+FV+ Y S++PD +A AKVPIL          + P               Q+IES V  EY+ + +P     LLP      A +RL  + +      + F +L   R  D   +     KL++ + V+D FL Q+G+      +FL   + L EV    FVQR L  LP + GVD+ ++  +    RL RWM+A   RPS   +   +E T+  + + +
Sbjct:    7 YDSKTCPYAQRSWITLLEKGLPFEIRLVDLNDKDEEFVKRYHSINPDQAAPAKVPIL----------IEPD------------GTQLIESLVICEYLEQRYPQV--PLLPADAVQAAKVRLFVDAFSAQLTPALFGLL---RAADAEAVAAGKAKLESALKVLDAFLTQHGSQEGGD-YFLGPTYSLAEVATVGFVQRSLSALPAFRGVDLWELVRQNKLGRLERWMEASLARPSAQQTRPDEEVTVNGWRKFV 232          
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|255079028|ref|XP_002503094.1| (predicted protein [Micromonas commoda] >gi|226518360|gb|ACO64352.1| predicted protein [Micromonas commoda])

HSP 1 Score: 122.865 bits (307), Expect = 1.104e-28
Identity = 81/237 (34.18%), Postives = 112/237 (47.26%), Query Frame = 0
Query:   43 TCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFL----CQYGADPAKT--PFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPS 273
            TCP+A +AWLAL+EK V+FE + VDL +K  D +  Y    PD  + AKVPIL H                         V +IES +CA Y+AEAF   G  LLP  P ++  + L  E +         P   A R   Q+ +D  L  L++ +   +R L       G D  ++  PF L + + + EV  +  + RL V L H+ G  +    EE G  RL RWM A  +RPS
Sbjct:  129 TCPFAHKAWLALVEKEVDFEMRAVDLNDKQPDMIAAYGVASPDAGSVAKVPILIH-----------------------DGVAMIESALCATYVAEAFKSSGADLLPATPAEQYKVGLWCETFAVGP-----PFFRALRATSQSDVDSALDDLRSVLRKCERCLEIAQTTTGRDKGQSDGPFVLGAKYSMAEVLTSTMLPRLSVALGHYRGFRLHAAVEEMGLHRLARWMDASMDRPS 337          
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|545353755|ref|XP_005642713.1| (glutathione S-transferase [Coccomyxa subellipsoidea C-169] >gi|384244670|gb|EIE18169.1| glutathione S-transferase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 115.546 bits (288), Expect = 6.183e-27
Identity = 75/250 (30.00%), Postives = 123/250 (49.20%), Query Frame = 0
Query:   43 TCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
            +CPYAQRAW+AL E G+ +   ++D  NK EDF  LYAS+  +    AKVP +                          D ++ ES V  EY+   +  +   LLP  P   A ++L  E++ T+   SY   +L+A   ++  ++     L+  + V+D+F+   G+    T +FL   +   E    PF++R L+ L    G D+LD+A   G  RL +W+QA  +R S  ++G S E+ +++  + L
Sbjct:    6 SCPYAQRAWIALEELGLAYTTTLIDATNKAEDFKVLYASIVQNTEDPAKVPTIVDG-----------------------DTKLTESLVIVEYLDAKYGGK-KGLLPKDPVQLAQVKLFVELF-TNKFSSYIYKMLSATSEEE--VNTLGRALEHNLTVLDKFITASGSREGGT-YFLGGRYSYAETVTTPFLRRALLVLKAHRGFDILDLASSNGLNRLLQWIQASLDRESNKSTGPSDEQIVQSAKKWL 227          
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|676377855|ref|XP_009032206.1| (selenoprotein, partial [Aureococcus anophagefferens] >gi|323456667|gb|EGB12533.1| selenoprotein, partial [Aureococcus anophagefferens])

HSP 1 Score: 108.997 bits (271), Expect = 4.983e-24
Identity = 85/255 (33.33%), Postives = 121/255 (47.45%), Query Frame = 0
Query:   38 LWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
             WNSGT PYAQRAW+A+ E  V F  + VDLQ+K E F+  Y     +P  RAKVPI+E                       +  + + ES V  EY+AE   D         P  +A  RL+ E+      G YF   L  RD  +A L   +  L   + V + FL ++G   A  PFF     C  E  LAPF+QR++ TL H+V VDV  + E     R+ R + A+  R +   +G  +++ I+   ++L
Sbjct:   69 FWNSGTUPYAQRAWIAMEETRVPFVTETVDLQHKSEAFLAKYE--EANPGGRAKVPIVE-----------------------IDGLVLTESAVVVEYLAEK--DGPGPFYLEDPARRAAARLMAEV---HPFGDYFK-FLKLRDDPEA-LAAAVADLTGKLEVFEAFLVKHG--DAAGPFFNGEDLCFAEANLAPFLQRMVPTLKHYVDVDVRRLCEP--FPRVDRLVSAVLARWTVRKTGVPEDKLIEGMDKML 287          
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|633907561|gb|KDD73699.1| (hypothetical protein H632_c1918p1 [Helicosporidium sp. ATCC 50920])

HSP 1 Score: 104.375 bits (259), Expect = 6.595e-23
Identity = 75/259 (28.96%), Postives = 117/259 (45.17%), Query Frame = 0
Query:   35 KVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLA-ARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
            K+  W+S TCP+AQ   +A         +K+  L +      + YA LHPDP A AKVPILE     L                      + ES V  EY+ + +P+    LL   P  +A  R+  E + +S   + F +L A + +    + D+ L  +K   + +DR   + G +     FF    F + ++     V R +V L H+ G+DV +  E  G  R++ WM+A   RPS   +  S EETIK+  + +
Sbjct:    7 KLIHWDSKTCPFAQSRPIA--------SYKLPSLTHP-----DTYAKLHPDPDAPAKVPILEDTDGTL----------------------LTESLVVTEYLNDKYPEP--PLLDNTPASRAKGRMFVEFFNSSYAPAVFGLLRAGSAEEASTKKDEFLKAIKTTGVALDRLAAKQGGN-----FFAGDRFTMSDIATVTIVHRSVVALKHYRGIDVWEHVERGGFARMKAWMEAALARPSVQQTCPSNEETIKSMKKFI 223          
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|470482895|ref|XP_004343655.1| (glutathione transferase family protein [Acanthamoeba castellanii str. Neff] >gi|440799479|gb|ELR20524.1| glutathione transferase family protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 102.064 bits (253), Expect = 6.963e-22
Identity = 74/262 (28.24%), Postives = 122/262 (46.56%), Query Frame = 0
Query:   28 AATKPQPKVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKT--PFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKN 287
            A+T    K+ L+ +  CPYAQRAW   +EKG+EFE   V L+    D+   Y  ++P    R  VP L H  R +                        ES + +EY+ +AFP+ G  LLP+ P  +   R + + + +    + F ++         +L +ELTK       ++ F   Y A+ +    P+FL   F L ++ + PF+ R  + L H+ G D+L + E     +L+RW  A+ +RPS   +  + E  I++
Sbjct:    2 ASTTNNKKITLYLNVVCPYAQRAWQTAVEKGLEFEAISVPLRGDKPDW---YWKVNP----RGTVPTLVHGERTIH-----------------------ESLLISEYLDDAFPEAGPRLLPSDPYQRYASRFVIDQFGSQVTPAVFQLIKNQDRAQDDKLKEELTK------KVEAFAELYAAESSSKDGPYFLGESFSLVDLAIVPFIYRFAIGLSHYRGFDLLAVDE-----KLKRWHDAVTQRPSWKTTTVTPEALIES 222          
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|1026271732|gb|OAD04772.1| (hypothetical protein MUCCIDRAFT_155713 [Mucor circinelloides f. lusitanicus CBS 277.49])

HSP 1 Score: 95.9005 bits (237), Expect = 7.152e-20
Identity = 74/241 (30.71%), Postives = 116/241 (48.13%), Query Frame = 0
Query:   35 KVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKT-PFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPST 274
            K+  +N+  CPYAQRA +AL E G E+E   +DLQNKP    + Y  ++P+     KVP L    ++L E +                       V  EY+A+ FPD   +LLP  P  +AN+R   E + +S + + F   +  +  + AR + E T + A ++  +  L Q     +KT P+FL   + L +V +APFV R+   L H +G    +  +     RL  ++    +RPST
Sbjct:    6 KITFYNAVVCPYAQRAAIALKEVGAEYETVNIDLQNKP----DWYKDVNPE----LKVPALNVEGQNLAESL-----------------------VIIEYLADRFPDA--NLLPKEPLKRANIRFAIEYF-SSKINTEFYKYVFNQSAENARENFE-TNVNAALIRFNELLLQ----QSKTGPYFLGETYSLADVAIAPFVLRIHALLEHILGGYKFEAIQNNP--RLHEFITGALQRPST 205          
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|552841511|ref|XP_005850327.1| (hypothetical protein CHLNCDRAFT_142109 [Chlorella variabilis] >gi|307109988|gb|EFN58225.1| hypothetical protein CHLNCDRAFT_142109 [Chlorella variabilis])

HSP 1 Score: 97.0561 bits (240), Expect = 9.066e-20
Identity = 69/253 (27.27%), Postives = 115/253 (45.45%), Query Frame = 0
Query:   44 CPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLLEMMK 296
             P+AQR  +AL EKG+++  + VDL NK ++F+ +Y ++ PDP+A AKVPIL    RD                    D+ ++ES+V  EY+   +P+             A +RL  + +      ++F +L A      A ++    KL+  +  +D  L  +G+      +F    + L EV     +QR ++ LP   G+DV  +  +    RL  W+QA   RPS   +    +  I  F   +  +K
Sbjct:   14 SPFAQRVQIALKEKGLDYSVRQVDLANKDDEFLAMYRAILPDPAASAKVPIL----RD-------------------GDIGLVESSVIVEYLEHKYPEPPLLPADPAA--AAGVRLFLDAFHRQFPAAFFALLGA---DTPAAVEAARQKLQTVLEALDGLLLAHGSSQGGD-YFAGGHYTLAEVVATTLLQRAVLVLPAHRGIDVWQLIRDAKLDRLESWLQAALARPSAAETQPDAKAVIATFAAFVAPLK 237          
The following BLAST results are available for this feature:
BLAST of EWM22258.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102717|gb|EWM22258.1|0.000e+0100.00glutathione s-transferase-like protein [Nannochlor... [more]
gi|545353761|ref|XP_005642716.1|7.658e-3633.33glutathione S-transferase [Coccomyxa subellipsoide... [more]
gi|552826362|ref|XP_005847002.1|3.128e-3334.25hypothetical protein CHLNCDRAFT_135021 [Chlorella ... [more]
gi|255079028|ref|XP_002503094.1|1.104e-2834.18predicted protein [Micromonas commoda] >gi|2265183... [more]
gi|545353755|ref|XP_005642713.1|6.183e-2730.00glutathione S-transferase [Coccomyxa subellipsoide... [more]
gi|676377855|ref|XP_009032206.1|4.983e-2433.33selenoprotein, partial [Aureococcus anophagefferen... [more]
gi|633907561|gb|KDD73699.1|6.595e-2328.96hypothetical protein H632_c1918p1 [Helicosporidium... [more]
gi|470482895|ref|XP_004343655.1|6.963e-2228.24glutathione transferase family protein [Acanthamoe... [more]
gi|1026271732|gb|OAD04772.1|7.152e-2030.71hypothetical protein MUCCIDRAFT_155713 [Mucor circ... [more]
gi|552841511|ref|XP_005850327.1|9.066e-2027.27hypothetical protein CHLNCDRAFT_142109 [Chlorella ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8438rna8438Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications