EWM22258.1, cds8411 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|585102717|gb|EWM22258.1| (glutathione s-transferase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 655.596 bits (1690), Expect = 0.000e+0 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
Query: 1 MPPPAGLLACFLIIVIMASSRFAHAFAAATKPQPKVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLLEMMKPGGGGAGAGGGAGGATGSTSSK 318
MPPPAGLLACFLIIVIMASSRFAHAFAAATKPQPKVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLLEMMKPGGGGAGAGGGAGGATGSTSSK
Sbjct: 1 MPPPAGLLACFLIIVIMASSRFAHAFAAATKPQPKVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLLEMMKPGGGGAGAGGGAGGATGSTSSK 318
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|545353761|ref|XP_005642716.1| (glutathione S-transferase [Coccomyxa subellipsoidea C-169] >gi|384244673|gb|EIE18172.1| glutathione S-transferase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 138.658 bits (348), Expect = 7.658e-36 Identity = 84/252 (33.33%), Postives = 129/252 (51.19%), Query Frame = 0
Query: 42 GTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHS-LLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
G CP+AQRAWL L E G+ +EHK+ D NKP++F +LYAS+ + AKVP + D ++ ES V EY+ + G + ++P P A ++L E++ + +F IL A D + A+L QE + V+D F+ G++ +FL + E PFV+R LVTLPH+ GVD L++A+ +G RL W+QA +R S +G S E I++F + +
Sbjct: 19 GGCPFAQRAWLTLEELGIPYEHKLADPANKPKEFTDLYASIVQNTDDSAKVPTIIDG-----------------------DEKLTESLVVVEYLDAKY--GGDTPIIPRDPAQLAKVKLFVELFSSKFQTPFFKILRAGSDDELAQLKQEFAH---NLEVLDNFIKASGSEGGG--YFLGERYSFAETVTTPFVRRALVTLPHFKGVDPLEIAKSKGLDRLVAWIQASMDRESNKKTGPSDEAIIESFKKFI 240
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|552826362|ref|XP_005847002.1| (hypothetical protein CHLNCDRAFT_135021 [Chlorella variabilis] >gi|307106655|gb|EFN54900.1| hypothetical protein CHLNCDRAFT_135021 [Chlorella variabilis]) HSP 1 Score: 131.724 bits (330), Expect = 3.128e-33 Identity = 87/254 (34.25%), Postives = 131/254 (51.57%), Query Frame = 0
Query: 39 WNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
++S TCPYAQR+W+ LLEKG+ FE ++VDL +K E+FV+ Y S++PD +A AKVPIL + P Q+IES V EY+ + +P LLP A +RL + + + F +L R D + KL++ + V+D FL Q+G+ +FL + L EV FVQR L LP + GVD+ ++ + RL RWM+A RPS + +E T+ + + +
Sbjct: 7 YDSKTCPYAQRSWITLLEKGLPFEIRLVDLNDKDEEFVKRYHSINPDQAAPAKVPIL----------IEPD------------GTQLIESLVICEYLEQRYPQV--PLLPADAVQAAKVRLFVDAFSAQLTPALFGLL---RAADAEAVAAGKAKLESALKVLDAFLTQHGSQEGGD-YFLGPTYSLAEVATVGFVQRSLSALPAFRGVDLWELVRQNKLGRLERWMEASLARPSAQQTRPDEEVTVNGWRKFV 232
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|255079028|ref|XP_002503094.1| (predicted protein [Micromonas commoda] >gi|226518360|gb|ACO64352.1| predicted protein [Micromonas commoda]) HSP 1 Score: 122.865 bits (307), Expect = 1.104e-28 Identity = 81/237 (34.18%), Postives = 112/237 (47.26%), Query Frame = 0
Query: 43 TCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFL----CQYGADPAKT--PFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPS 273
TCP+A +AWLAL+EK V+FE + VDL +K D + Y PD + AKVPIL H V +IES +CA Y+AEAF G LLP P ++ + L E + P A R Q+ +D L L++ + +R L G D ++ PF L + + + EV + + RL V L H+ G + EE G RL RWM A +RPS
Sbjct: 129 TCPFAHKAWLALVEKEVDFEMRAVDLNDKQPDMIAAYGVASPDAGSVAKVPILIH-----------------------DGVAMIESALCATYVAEAFKSSGADLLPATPAEQYKVGLWCETFAVGP-----PFFRALRATSQSDVDSALDDLRSVLRKCERCLEIAQTTTGRDKGQSDGPFVLGAKYSMAEVLTSTMLPRLSVALGHYRGFRLHAAVEEMGLHRLARWMDASMDRPS 337
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|545353755|ref|XP_005642713.1| (glutathione S-transferase [Coccomyxa subellipsoidea C-169] >gi|384244670|gb|EIE18169.1| glutathione S-transferase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 115.546 bits (288), Expect = 6.183e-27 Identity = 75/250 (30.00%), Postives = 123/250 (49.20%), Query Frame = 0
Query: 43 TCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
+CPYAQRAW+AL E G+ + ++D NK EDF LYAS+ + AKVP + D ++ ES V EY+ + + LLP P A ++L E++ T+ SY +L+A ++ ++ L+ + V+D+F+ G+ T +FL + E PF++R L+ L G D+LD+A G RL +W+QA +R S ++G S E+ +++ + L
Sbjct: 6 SCPYAQRAWIALEELGLAYTTTLIDATNKAEDFKVLYASIVQNTEDPAKVPTIVDG-----------------------DTKLTESLVIVEYLDAKYGGK-KGLLPKDPVQLAQVKLFVELF-TNKFSSYIYKMLSATSEEE--VNTLGRALEHNLTVLDKFITASGSREGGT-YFLGGRYSYAETVTTPFLRRALLVLKAHRGFDILDLASSNGLNRLLQWIQASLDRESNKSTGPSDEQIVQSAKKWL 227
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|676377855|ref|XP_009032206.1| (selenoprotein, partial [Aureococcus anophagefferens] >gi|323456667|gb|EGB12533.1| selenoprotein, partial [Aureococcus anophagefferens]) HSP 1 Score: 108.997 bits (271), Expect = 4.983e-24 Identity = 85/255 (33.33%), Postives = 121/255 (47.45%), Query Frame = 0
Query: 38 LWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
WNSGT PYAQRAW+A+ E V F + VDLQ+K E F+ Y +P RAKVPI+E + + + ES V EY+AE D P +A RL+ E+ G YF L RD +A L + L + V + FL ++G A PFF C E LAPF+QR++ TL H+V VDV + E R+ R + A+ R + +G +++ I+ ++L
Sbjct: 69 FWNSGTUPYAQRAWIAMEETRVPFVTETVDLQHKSEAFLAKYE--EANPGGRAKVPIVE-----------------------IDGLVLTESAVVVEYLAEK--DGPGPFYLEDPARRAAARLMAEV---HPFGDYFK-FLKLRDDPEA-LAAAVADLTGKLEVFEAFLVKHG--DAAGPFFNGEDLCFAEANLAPFLQRMVPTLKHYVDVDVRRLCEP--FPRVDRLVSAVLARWTVRKTGVPEDKLIEGMDKML 287
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|633907561|gb|KDD73699.1| (hypothetical protein H632_c1918p1 [Helicosporidium sp. ATCC 50920]) HSP 1 Score: 104.375 bits (259), Expect = 6.595e-23 Identity = 75/259 (28.96%), Postives = 117/259 (45.17%), Query Frame = 0
Query: 35 KVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLA-ARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLL 292
K+ W+S TCP+AQ +A +K+ L + + YA LHPDP A AKVPILE L + ES V EY+ + +P+ LL P +A R+ E + +S + F +L A + + + D+ L +K + +DR + G + FF F + ++ V R +V L H+ G+DV + E G R++ WM+A RPS + S EETIK+ + +
Sbjct: 7 KLIHWDSKTCPFAQSRPIA--------SYKLPSLTHP-----DTYAKLHPDPDAPAKVPILEDTDGTL----------------------LTESLVVTEYLNDKYPEP--PLLDNTPASRAKGRMFVEFFNSSYAPAVFGLLRAGSAEEASTKKDEFLKAIKTTGVALDRLAAKQGGN-----FFAGDRFTMSDIATVTIVHRSVVALKHYRGIDVWEHVERGGFARMKAWMEAALARPSVQQTCPSNEETIKSMKKFI 223
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|470482895|ref|XP_004343655.1| (glutathione transferase family protein [Acanthamoeba castellanii str. Neff] >gi|440799479|gb|ELR20524.1| glutathione transferase family protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 102.064 bits (253), Expect = 6.963e-22 Identity = 74/262 (28.24%), Postives = 122/262 (46.56%), Query Frame = 0
Query: 28 AATKPQPKVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKT--PFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKN 287
A+T K+ L+ + CPYAQRAW +EKG+EFE V L+ D+ Y ++P R VP L H R + ES + +EY+ +AFP+ G LLP+ P + R + + + + + F ++ +L +ELTK ++ F Y A+ + P+FL F L ++ + PF+ R + L H+ G D+L + E +L+RW A+ +RPS + + E I++
Sbjct: 2 ASTTNNKKITLYLNVVCPYAQRAWQTAVEKGLEFEAISVPLRGDKPDW---YWKVNP----RGTVPTLVHGERTIH-----------------------ESLLISEYLDDAFPEAGPRLLPSDPYQRYASRFVIDQFGSQVTPAVFQLIKNQDRAQDDKLKEELTK------KVEAFAELYAAESSSKDGPYFLGESFSLVDLAIVPFIYRFAIGLSHYRGFDLLAVDE-----KLKRWHDAVTQRPSWKTTTVTPEALIES 222
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|1026271732|gb|OAD04772.1| (hypothetical protein MUCCIDRAFT_155713 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 95.9005 bits (237), Expect = 7.152e-20 Identity = 74/241 (30.71%), Postives = 116/241 (48.13%), Query Frame = 0
Query: 35 KVRLWNSGTCPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKT-PFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPST 274
K+ +N+ CPYAQRA +AL E G E+E +DLQNKP + Y ++P+ KVP L ++L E + V EY+A+ FPD +LLP P +AN+R E + +S + + F + + + AR + E T + A ++ + L Q +KT P+FL + L +V +APFV R+ L H +G + + RL ++ +RPST
Sbjct: 6 KITFYNAVVCPYAQRAAIALKEVGAEYETVNIDLQNKP----DWYKDVNPE----LKVPALNVEGQNLAESL-----------------------VIIEYLADRFPDA--NLLPKEPLKRANIRFAIEYF-SSKINTEFYKYVFNQSAENARENFE-TNVNAALIRFNELLLQ----QSKTGPYFLGETYSLADVAIAPFVLRIHALLEHILGGYKFEAIQNNP--RLHEFITGALQRPST 205
BLAST of EWM22258.1 vs. NCBI_GenBank
Match: gi|552841511|ref|XP_005850327.1| (hypothetical protein CHLNCDRAFT_142109 [Chlorella variabilis] >gi|307109988|gb|EFN58225.1| hypothetical protein CHLNCDRAFT_142109 [Chlorella variabilis]) HSP 1 Score: 97.0561 bits (240), Expect = 9.066e-20 Identity = 69/253 (27.27%), Postives = 115/253 (45.45%), Query Frame = 0
Query: 44 CPYAQRAWLALLEKGVEFEHKIVDLQNKPEDFVELYASLHPDPSARAKVPILEHCTRDLEEEVPPPTPSTFPTVSSLYDVQVIESNVCAEYIAEAFPDQGHSLLPTRPPDKANMRLLGEIWQTSGMGSYFPILLAARDGDQARLDQELTKLKAGMMVMDRFLCQYGADPAKTPFFLESGFCLGEVCLAPFVQRLLVTLPHWVGVDVLDMAEEEGCRRLRRWMQALAERPSTVASGGSKEETIKNFTRLLEMMK 296
P+AQR +AL EKG+++ + VDL NK ++F+ +Y ++ PDP+A AKVPIL RD D+ ++ES+V EY+ +P+ A +RL + + ++F +L A A ++ KL+ + +D L +G+ +F + L EV +QR ++ LP G+DV + + RL W+QA RPS + + I F + +K
Sbjct: 14 SPFAQRVQIALKEKGLDYSVRQVDLANKDDEFLAMYRAILPDPAASAKVPIL----RD-------------------GDIGLVESSVIVEYLEHKYPEPPLLPADPAA--AAGVRLFLDAFHRQFPAAFFALLGA---DTPAAVEAARQKLQTVLEALDGLLLAHGSSQGGD-YFAGGHYTLAEVVATTLLQRAVLVLPAHRGIDVWQLIRDAKLDRLESWLQAALARPSAAETQPDAKAVIATFAAFVAPLK 237 The following BLAST results are available for this feature:
BLAST of EWM22258.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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