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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100504g6.6931.mrna |
| Orig protein id | gnl|cribi|Naga_100504g6.6931 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:666030..667860 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8431 ID=rna8431|Name=rna8431|organism=Nannochloropsis gaditana|type=mRNA|length=396bp
ATGCAGCATTTCGTCATTCGCACAATCCCTCCTTCGGCCTCGACGCCCCC
GAGCTTCCGTTGCGGCTCTGTCGGCCCGTTTGAGGACCTGGAGGACCTCC
TATATGAGATCTCTTCGTGTCTGGACGTGGGCCTCAGGCTCCGTCGGTAC
CCCCGCCCTTCCCACGCTCCCTCCCTCGCTTCCTCCCTCCCACACTTGGA
CGTGTCGTGCCACTCGGTGAACTCCTGTGCGTCCGATTACGCCCCTGGGA
GCTTGGCAAGCGCCGAAGACACGAAAGACAGGGAGGGAGGAGGGGAGGGA
GGGAGGGAGGAAGGGGAGGAGGCGTCGAGGGACGGGAAGCAAGACGGAAG
TCCTACCACGCCCTCTCCCCCAATGGCACCCTCCTTCGGGCCCTGA back to topprotein sequence of rna8431 >rna8431-protein ID=rna8431-protein|Name=rna8431|organism=Nannochloropsis gaditana|type=polypeptide|length=306bp
MSLVQVDITDLKPAPQQGQAHHGHHPGTRHLDLYAIMRLRRRSIYQQTNK
APHPPLTAKNRTADTVMTDNARAILSFPSPPPPSSSGEDGATSQVPELPQ
HFNEEPSMTTALNATFRFALPDECLPSRGLEAVEWLGKGPPRVIHVLLYE
RRTIMADSLIGEVEVPLSALTEEEFIDTWLPISTRDHHHPAPSSTTPSLP
PSHAAVFQNHHLYGGSQAWTAGAKGPPVVPVPQEGGKEGGTQTVWMVRVQ
VLLSFLLMCAKQAERGEREGEEMGEEEDEEEDEEGEDEEAEPNEHQVRAT
SMMDDL back to topmRNA from alignment at KK037248.1:666030..667860+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8431 ID=rna8431|Name=rna8431|organism=Nannochloropsis gaditana|type=mRNA|length=1831bp|location=Sequence derived from alignment at KK037248.1:666030..667860+ (Nannochloropsis gaditana)
TCCCTTCCGGTTCATGTCCCTCGTCCAAGTCGACATCACGGATCTAAAGC
CCGCGCCCCAGCAGGGACAGGTGACGGCGTGCgacgttctccctccctcc
ctccctccctccctccctccccacttcCCTCACTTCTCTTATTCCGTCGC
TTTGTGTATTGCCATTTCAATAGTGCTTTAACTAAGGTGAACGTTTTGCC
GACAGTGGTAGATTTAGAATCAAATTTTCAATCTTTCATATTCATTCGAG
Cgacgtccttccctccccctctccctccctccctctctgtctcccttcct
ccgtccagGCCCACCACGGCCATCATCCGGGCACCCGCCACCTGGATCTC
TATGCTATCATGCGCTTGCGACGTCGGTCGATATACCAGCAGACCAATAA
GGCGCCACATGTGCGTtgctagggagggagggagggaagaagggagggag
gaaagaaggctgTTGTTGCGCAATGACTGACTGCATGTGCTTGACTTACC
CTCTCTCTGCTTCTTTCCAGCCCCCGCTCACAGCCAAGAATCGAACCGCC
GACACGGTCATGACGGACAACGCGCGGGCGATCCTCAGCTtcccctcgcc
gcctcctccttcctcatcgggggaggacggggctaCCTCCCAGGTTCCGG
AGCTACCGCAGCATTTCAACGAAGAGCCCTCCATGACCACGGCGCTGAAT
GCCACCTTTCGTTTCGCCTTGCCGGACGagtgcctcccctcccgcggaCT
GGAAGCGGTGGAGTGGCTGGGGAAAGGCCCGCCTCGGGTaggtaggaggg
gaggacgggggggaggaaggggttgaagcacggggggggggagggggagc
ggctGTCGGGCATGTGCTTGGCGCAAAAGCTTGCCTACCTTGTACAGGCC
CATATGGAGCTCGGGATCGCTTAAGTTTCGAGGTTCTCACACGACGCGTC
GTCGTTaccctacctccctccccccctccacccctccctccctccttccc
tcaggtCATCCACGTTCTGCTGTACGAACGCCGGACGATCATGGCGGACT
CCCTGATAGGGGAAGTGGAAGTGCCGCTCTCCGCgctcacggaggaggaa
ttcaTCGACACGTGGCTGCCCATAAGCACCCgggaccaccaccaccctgc
cccttcctccaccacgccctccctcccgccctcccacgcggCTGTCTTCC
AGAACCATCATCTCTACGGGGGCAGTCAGGCGTGGACAGCGGGCGCAAAA
GGCCCTCCAGTCGTGCCGGTGCctcaggaaggagggaaggagggtgggac
gcAGACGGTGTGGATGGTGAGGGTGCAAgtcctcctgtccttcttgTTGA
TGTGCGCCAAGCAGGcggagcggggggagagggagggggaggagatggga
gaggaggaggatgaggaggaggacgaggagggggaggacgaggaggcgga
gccgAACGAGCACCAGGTGCGGGCAACGTCGATGATGGATGAcctgtgag
gagggagagagatcgggagggagggagggagggagggagggagggaagaa
gagagggagggagcagagaCCGCAGGGCGAAGAATACTAGCGAGTGCCAG
GGTGGCGGGCGAGGAAATCGGAGAAATTTATGGCGAGGAAATGAGGAGCC
TGGTGAGACGCGCAAAGAAAGCAGGGTTAGCACGCAGAGGTATATTGCGT
GAATTTTGACGGCCCACGCGCATTGTGTAAGGGTTCTGGTAGGAACGCAG
GCGGGAATAGGAAACACCAGTTCGGGTTGGGGGTTTATTGGTTGAAATAA
AAGCAATCAGAAAGTCTTTTAACGTCTTTAA back to topCoding sequence (CDS) from alignment at KK037248.1:666030..667860+ >rna8431 ID=rna8431|Name=rna8431|organism=Nannochloropsis gaditana|type=CDS|length=3684bp|location=Sequence derived from alignment at KK037248.1:666030..667860+ (Nannochloropsis gaditana)
ATGTCCCTCGTCCAAGTCGACATCACGGATCTAAAGCCCGCGCCCCAGCA
GGGACAGGCCCACCACGGCCATCATCCGGGCACCCGCCACCTGGATCTCT
ATGCTATCATGCGCTTGCGACGTCGGTCGATATACCAGCAGACCAATAAG
GCGCCACATCCCCCGCTCACAGCCAAGAATCGAACCGCCGACACGGTCAT
GACGGACAACGCGCGGGCGATCCTCAGCTtcccctcgccgcctcctcctt
cctcatcgggggaggacggggctaCCTCCCAGGTTCCGGAGCTACCGCAG
CATTTCAACGAAGAGCCCTCCATGACCACGGCGCTGAATGCCACCTTTCG
TTTCGCCTTGCCGGACGagtgcctcccctcccgcggaCTGGAAGCGGTGG
AGTGGCTGGGGAAAGGCCCGCCTCGGgtCATCCACGTTCTGCTGTACGAA
CGCCGGACGATCATGGCGGACTCCCTGATAGGGGAAGTGGAAGTGCCGCT
CTCCGCgctcacggaggaggaattcaTCGACACGTGGCTGCCCATAAGCA
CCCgggaccaccaccaccctgccccttcctccaccacgccctccctcccg
ccctcccacgcggCTGTCTTCCAGAACCATCATCTCTACGGGGGCAGTCA
GGCGTGGACAGCGGGCGCAAAAGGCCCTCCAGTCGTGCCGGTGCctcagg
aaggagggaaggagggtgggacgcAGACGGTGTGGATGGTGAGGGTGCAA
gtcctcctgtccttcttgTTGATGTGCGCCAAGCAGGcggagcgggggga
gagggagggggaggagatgggagaggaggaggatgaggaggaggacgagg
agggggaggacgaggaggcggagccgAACGAGCACCAGGTGCGGGCAACG
TCGATGATGGATGAcctgtgaATGTCCCTCGTCCAAGTCGACATCACGGA
TCTAAAGCCCGCGCCCCAGCAGGGACAGGCCCACCACGGCCATCATCCGG
GCACCCGCCACCTGGATCTCTATGCTATCATGCGCTTGCGACGTCGGTCG
ATATACCAGCAGACCAATAAGGCGCCACATCCCCCGCTCACAGCCAAGAA
TCGAACCGCCGACACGGTCATGACGGACAACGCGCGGGCGATCCTCAGCT
tcccctcgccgcctcctccttcctcatcgggggaggacggggctaCCTCC
CAGGTTCCGGAGCTACCGCAGCATTTCAACGAAGAGCCCTCCATGACCAC
GGCGCTGAATGCCACCTTTCGTTTCGCCTTGCCGGACGagtgcctcccct
cccgcggaCTGGAAGCGGTGGAGTGGCTGGGGAAAGGCCCGCCTCGGgtC
ATCCACGTTCTGCTGTACGAACGCCGGACGATCATGGCGGACTCCCTGAT
AGGGGAAGTGGAAGTGCCGCTCTCCGCgctcacggaggaggaattcaTCG
ACACGTGGCTGCCCATAAGCACCCgggaccaccaccaccctgccccttcc
tccaccacgccctccctcccgccctcccacgcggCTGTCTTCCAGAACCA
TCATCTCTACGGGGGCAGTCAGGCGTGGACAGCGGGCGCAAAAGGCCCTC
CAGTCGTGCCGGTGCctcaggaaggagggaaggagggtgggacgcAGACG
GTGTGGATGGTGAGGGTGCAAgtcctcctgtccttcttgTTGATGTGCGC
CAAGCAGGcggagcggggggagagggagggggaggagatgggagaggagg
aggatgaggaggaggacgaggagggggaggacgaggaggcggagccgAAC
GAGCACCAGGTGCGGGCAACGTCGATGATGGATGAcctgtgaATGTCCCT
CGTCCAAGTCGACATCACGGATCTAAAGCCCGCGCCCCAGCAGGGACAGG
CCCACCACGGCCATCATCCGGGCACCCGCCACCTGGATCTCTATGCTATC
ATGCGCTTGCGACGTCGGTCGATATACCAGCAGACCAATAAGGCGCCACA
TCCCCCGCTCACAGCCAAGAATCGAACCGCCGACACGGTCATGACGGACA
ACGCGCGGGCGATCCTCAGCTtcccctcgccgcctcctccttcctcatcg
ggggaggacggggctaCCTCCCAGGTTCCGGAGCTACCGCAGCATTTCAA
CGAAGAGCCCTCCATGACCACGGCGCTGAATGCCACCTTTCGTTTCGCCT
TGCCGGACGagtgcctcccctcccgcggaCTGGAAGCGGTGGAGTGGCTG
GGGAAAGGCCCGCCTCGGgtCATCCACGTTCTGCTGTACGAACGCCGGAC
GATCATGGCGGACTCCCTGATAGGGGAAGTGGAAGTGCCGCTCTCCGCgc
tcacggaggaggaattcaTCGACACGTGGCTGCCCATAAGCACCCgggac
caccaccaccctgccccttcctccaccacgccctccctcccgccctccca
cgcggCTGTCTTCCAGAACCATCATCTCTACGGGGGCAGTCAGGCGTGGA
CAGCGGGCGCAAAAGGCCCTCCAGTCGTGCCGGTGCctcaggaaggaggg
aaggagggtgggacgcAGACGGTGTGGATGGTGAGGGTGCAAgtcctcct
gtccttcttgTTGATGTGCGCCAAGCAGGcggagcggggggagagggagg
gggaggagatgggagaggaggaggatgaggaggaggacgaggagggggag
gacgaggaggcggagccgAACGAGCACCAGGTGCGGGCAACGTCGATGAT
GGATGAcctgtgaATGTCCCTCGTCCAAGTCGACATCACGGATCTAAAGC
CCGCGCCCCAGCAGGGACAGGCCCACCACGGCCATCATCCGGGCACCCGC
CACCTGGATCTCTATGCTATCATGCGCTTGCGACGTCGGTCGATATACCA
GCAGACCAATAAGGCGCCACATCCCCCGCTCACAGCCAAGAATCGAACCG
CCGACACGGTCATGACGGACAACGCGCGGGCGATCCTCAGCTtcccctcg
ccgcctcctccttcctcatcgggggaggacggggctaCCTCCCAGGTTCC
GGAGCTACCGCAGCATTTCAACGAAGAGCCCTCCATGACCACGGCGCTGA
ATGCCACCTTTCGTTTCGCCTTGCCGGACGagtgcctcccctcccgcgga
CTGGAAGCGGTGGAGTGGCTGGGGAAAGGCCCGCCTCGGgtCATCCACGT
TCTGCTGTACGAACGCCGGACGATCATGGCGGACTCCCTGATAGGGGAAG
TGGAAGTGCCGCTCTCCGCgctcacggaggaggaattcaTCGACACGTGG
CTGCCCATAAGCACCCgggaccaccaccaccctgccccttcctccaccac
gccctccctcccgccctcccacgcggCTGTCTTCCAGAACCATCATCTCT
ACGGGGGCAGTCAGGCGTGGACAGCGGGCGCAAAAGGCCCTCCAGTCGTG
CCGGTGCctcaggaaggagggaaggagggtgggacgcAGACGGTGTGGAT
GGTGAGGGTGCAAgtcctcctgtccttcttgTTGATGTGCGCCAAGCAGG
cggagcggggggagagggagggggaggagatgggagaggaggaggatgag
gaggaggacgaggagggggaggacgaggaggcggagccgAACGAGCACCA
GGTGCGGGCAACGTCGATGATGGATGAcctgtga back to top
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