EWM22266.1, cds8404 (CDS) Nannochloropsis gaditana

Overview
NameEWM22266.1
Unique Namecds8404
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:666043..666099 +
Alignment locationKK037248.1:666338..666439 +
Alignment locationKK037248.1:666550..666816 +
Alignment locationKK037248.1:667034..667528 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22266.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100504g6.6931.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:666043..666099 +
KK037248.1supercontigKK037248.1:666338..666439 +
KK037248.1supercontigKK037248.1:666550..666816 +
KK037248.1supercontigKK037248.1:667034..667528 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
Homology
[Close]
BLAST of EWM22266.1 vs. NCBI_GenBank
Match: gi|585102727|gb|EWM22266.1| (hypothetical protein Naga_100504g6 [Nannochloropsis gaditana])

HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0 
Query:    1 MSLVQVDITDLKPAPQQGQAHHGHHPGTRHLDLYAIMRLRRRSIYQQTNKAPHPPLTAKNRTADTVMTDNARAILSFPSPPPPSSSGEDGATSQVPELPQHFNEEPSMTTALNATFRFALPDECLPSRGLEAVEWLGKGPPRVIHVLLYERRTIMADSLIGEVEVPLSALTEEEFIDTWLPISTRDHHHPAPSSTTPSLPPSHAAVFQNHHLYGGSQAWTAGAKGPPVVPVPQEGGKEGGTQTVWMVRVQVLLSFLLMCAKQAERGEREGEEMGEEEDEEEDEEGEDEEAEPNEHQVRATSMMDDL 306
            MSLVQVDITDLKPAPQQGQAHHGHHPGTRHLDLYAIMRLRRRSIYQQTNKAPHPPLTAKNRTADTVMTDNARAILSFPSPPPPSSSGEDGATSQVPELPQHFNEEPSMTTALNATFRFALPDECLPSRGLEAVEWLGKGPPRVIHVLLYERRTIMADSLIGEVEVPLSALTEEEFIDTWLPISTRDHHHPAPSSTTPSLPPSHAAVFQNHHLYGGSQAWTAGAKGPPVVPVPQEGGKEGGTQTVWMVRVQVLLSFLLMCAKQAERGEREGEEMGEEEDEEEDEEGEDEEAEPNEHQVRATSMMDDL
Sbjct:    1 MSLVQVDITDLKPAPQQGQAHHGHHPGTRHLDLYAIMRLRRRSIYQQTNKAPHPPLTAKNRTADTVMTDNARAILSFPSPPPPSSSGEDGATSQVPELPQHFNEEPSMTTALNATFRFALPDECLPSRGLEAVEWLGKGPPRVIHVLLYERRTIMADSLIGEVEVPLSALTEEEFIDTWLPISTRDHHHPAPSSTTPSLPPSHAAVFQNHHLYGGSQAWTAGAKGPPVVPVPQEGGKEGGTQTVWMVRVQVLLSFLLMCAKQAERGEREGEEMGEEEDEEEDEEGEDEEAEPNEHQVRATSMMDDL 306
The following BLAST results are available for this feature:
BLAST of EWM22266.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102727|gb|EWM22266.1|0.000e+0100.00hypothetical protein Naga_100504g6 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8431rna8431Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications