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Properties
| Property Name | Value |
|---|
| Product | ubiquitin-conjugating enzyme |
| Orig transcript id | gnl|cribi|Naga_100017g34.344.mrna |
| Orig protein id | gnl|cribi|Naga_100017g34.344 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:552048..552870 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna843 ID=rna843|Name=rna843|organism=Nannochloropsis gaditana|type=mRNA|length=4328bp
GAAGCTGGAACTGGTGAGCAGGGGACGATTGACGCATGTCCCAGAATTTG
ACCGTCTGGTCCCACGAGCCAGTCACTATGCACGGTAGCTGTGGCACGTG
TGCGATGCATTTAATGGGAGCCGAATGCTCGGCTATCTGCTGGGTTTGAG
GGGCACCGCCCGCAGGATTAGGGGTCCACATCATAGCCTTGTTGTCACAG
CCCGCCGAGAAAACGTTTCCTTCTGGTGACATGCATACATCCAGCACAGG
ACCTTGGTGCTTGATTTCTCCGACGGGAGTGGCCATAATCCCTGGACCTT
GCGAAGCCATCCCTAGTCCCTGTGACGCTTGCTCCTGGAGGTTCCAGAGC
CTCACAGAATTGTCCCAAGACCCTGCCGCTACAAGATTTAGCGTCTCCGA
TGGCGCAAATGCCAGCGATGAAATCCCATCAGCTTGTGTGTCTGGGAGCT
TTAGGTCGGGCGAAGCCACTGGTTGCGTGCTGCCGACGGTCTGGCTGCTC
AATCCCCCCCAGGACATGGCCTTTTTCGGTTGCCTAGAAGGAAAGGATGC
CAGTGAGAATCTAAGAGGGTCACGCGCGCCCTGCATGATAATACAGTTGG
CATTGTAGGGATTAAGCATTATCAAACCAAGGGCAGTCTGCATGTTCATA
GGGCATCAAAGAAGGAATACTCGAGACGAGGCCATCGCCTAACCCTAGAC
CTCACAAAGATGAGGTTGGCGAGGCACTCGAGACGTTCTCTTTTTTTCCT
CCGAAACAATCATTTCCCTGACTTTTGCTCATTTGCAAACGTATGAACTT
AGTTCGAGGGGTCTCACGCTGATGATAATGACATTCAGTGCAGCTTCTCG
GCAAGTGGTACGAGAAATCTACCACTGGGATCAATAGGAGGGTGGAGGAG
CAGCCTATCAGGAAAAATAAACTCAGCTATAAGACAAATTTGTCGGTCTT
TTTATGTGAGAAATAATTGTGTCCAATACTCTGGAAGCATGAAACACTTT
AAGAGAGCTGGCACGGCATTCTTTGACCACACGAACTGCGCGCGCCCTCA
GGACGATGTTGATGACTCGAAATTCTTTCCGTCTTTCACTCGCTCTTTGG
AGGGGCTGAGGGAGGGACCTAGGCACCCAAGCGGCCTTCATGCAAGCCAT
ATGCGCGTAATATGCCTCAGATACATTTTCTATACCTATGATCTACATTT
TCTTAGGACTCACGGGGGCGAGCTGGCAAGGCCAGGACGTCTAATTTGAC
CATGACAGACGCAGCTGCAGAGCAAAAGTCACGCGATGACATGATACGTG
CTCTAGAAGATGCTCTCAAGGAGAAAGACACCAATTTGAGCCAACTGAAG
TTGAAAACGAAATATTTCGTCCAAGAAATGCGCGCCGAGCTCCAGGAGGC
GAAGGAAGGGAGGAAAGCCGCGGAGCAAGAGAGCGTGGGATTGCGGGCGG
AACTCGAGCGCGCCCGGGCCCCACATTCTGCATCACCGTCTACCTCCGGA
CAAATTCCGGGAGACGACGGTTCGGAATCAATCGCATGCAGCCACAGCAA
TCGCGATCGACTGGAGGACACCGTTCAGGCTTTGCAAGCTGAGCTTGGAC
AGGTGCGAATGGCCGCGCGACGAGCTCAGGAGGAACTGGCGGTGGCCAAA
GAGGAAGCTCAGGGGCTCATGGACCAGCTCTCAGAGGTTCGAGACAAAGA
AAGTAAGATGGACGCTTTGAGACGACGGATAAAAAACTTGCAAGAAGAAG
TAGAAGTGGCGAAGGAGGAGCATGGAACGGCACTTAACGAGCTTGCGCAG
AGGGAGACGGAAGCGGAAAATCTTCGCGAGGAAGTGGAGGCGTCGAAGCG
AGAAATCTCTCAAATGGCACTGATGTACAAACAGGAAAGAAATGAGCTGA
CGCAGCAGAGCCATGAGGTTGAAAAACAGCTCCAAGAGATGCTAAATCAG
CGAAAATATCTGGGAAACGCCGCCCCCCCACAAAATATCAGTCTGCCCCA
AGGGTCCCCCATCCACGCGTCCGGCCCCGACCACGATCCTGCAGCGGAAG
CCGATGCCGCAAGAGAATCGCTCGATTCCAGGGCCATCGGACCAACCGCT
TCGTCGCCCGCGGCGGCTGCGAGCACGACATGCCCGCCGACAACTCCGGC
TCTTCGCTCTGAGGCCGAGCCGGCGACTTCCACGACCACATCCTCCTCCT
GTGCGGCTCCTGTTGTTCTCGCTAGCCTCATTTCAGTGCCAAGGCCAAGC
CTCTCCTCCTGGCGCACGGCGGGGACGGCAACGCAAGCGGAGGAAGGGTC
TTCCGACCTTGATGCCTCCCTTTCTGCGGAGGAAACAACGCCGGAGGCAG
CCTCCTCTTTATCCATGGAGGGAAGACACGTAGGCGACAAGGGGAGGTTG
GACCAAGTGGACCCCTCCCGCCTGGACGGGCCGACCCAGCACTTGGTGGC
CCAGCTCCGTGAGCGTGAGGCGACGGTAGCGGAGAAGACAGTCTCTTTGG
AGCGGGCCCTGGCGTCTGTAGCCGCCTTGACGGAGGAGCGAGATTTCCTG
CAGAAGCAGCTGGACGACTTGGGCGCAGAAAAGGAGGCGCTGCAGAGCGG
GATGGAGCAGCTCAGGTCGGCGAAGGAGGCACTGGAGGGTAGCAAGGAAA
GTGGAGACAAGGAAAGTGACCGGCTCCGGGGAGAATGCGTGAGGCTGGAA
AGCCTTGTCCAAAGATTGGAGAGTGCTCAGCGGGCGCACGAGGACCAAAT
CAAGAGCGTGCAGGGGGAGGCGAAGGAGACAGTGGAGCGTGTCAGGATGG
ACGCTGCGACCGAGGTCGGCGGGGCGAGATCTCAGGTGGAGGAGGCGGAG
CGGGCGCGGAGACACGCGGAAAATGCGGCGACGAACCTTCGCGTGGAGCT
GGAGACGGTGCGGCGGTCGGTAACGCAGGGCGTGGAGGAGCGGGCGCGGG
CATTGATCGCCTTGGGGAAGGAGCGCGAGAGCCTGGCGGCAGAGCTGGAA
CAGGAGAGAGAGAACGGCCAAGAACGACGGAGGCAGATGAAACAATATTT
GGAGACCTTAACGGGCGAAAAGGAAGAGCGGGAGGCAGAGCTGTCGAGGA
CCCGAGCTGCCTTGGAGACGGCGAAGCAAGAGCAGGGTGTGTGGGAGGAG
TCGGCTCTGGCCGCGAGAGAGCAGTTGAGAACTCAAGCCAAGGCGCACGA
AAGCGAGATCCAACACATGGAGCAGCGCCTCAGGGAACTGGATAGATGTA
CTTCCGAGCAGATCATGGAGAAGGATGCGGAGTTGGCGAGGCTGATAGAG
GAGCAAGCTGTGCGGCTATCAAGCACGGCGCGTCAGTCGGAGGAGATGGA
AATACACTTGAAAGCAGTGGAGGCGGAAACTGCCGCCCACAAACAAAAGC
GCTTGGCCGCAAAGAATGAGATGATTTCTTTGGCCCAGGCATTGGAGGCC
GCGACCACCACGTCTCGCATGGTGGACGAGAGCATTGAGCACACCTTGGT
CCCCCGGTGTTTGGAGCACTTGTCCTCGCTGGCCAAGGCCACGGAGCTCG
TGGACATGGCCTTGTGGCAGCTCAAACGACATGATCGAGTTGCGGGTTCC
TCGACTTCTACATCGTCATGGGTAGCTAGGAGGAGGGGCCAAAGCAGCGA
TCAGTTGCCATCGGTTGAGATGGGCCGTCTCCCAGCACCCGGTGTGAGAC
ATCAGGACATGGCTGGCGGAGCTGCAGGGCGAGAAGAGCGGAACCAAAGC
ATGGACGGCTCAGGCAGCCCGTCGGTCCATCACTTGCTGGCTGACGAAGG
GGAAGACGAAAGCGCCCACGCTCTAGACAGCGATTTTCAACACAAAGCAT
CACAGGCACAATGGGAGAGCGACCATCGGGCCCATTCCCGATCCACGGCT
GCAATGGAGCGTTTGCAGCGTCTGGATGTGGAAAGTGCGCAAGTATCAGC
AGAATTTAAAGTGCTGACGCAGTCCTTAGAAAGGTTGCTGTGGGAACTCG
ACCATTCCACGGAAGACGGATCGGACGACTCTCGTTCGAATAACTACATC
TCTCTGTGCAGCAAAATTCTGCGAGAGTGCTTCTCATACGTGCGGCATAC
ATCTGCTGGTCTTGCTGTTTCCAATACCGCTTCAAATCGCAGGACAGGGA
CAACGATCGCTGCGTCAAGGGCATTGAGGCCTGCTCGGCAACCATACGCT
GTCTTGGGTAGTGAGGAGGGACTTGACGACCGCGTCATAGATTCTGTGTG
ATGAGACAAGGTGTACAAAAGGTAACTCAAGTAACCACGACATGTGAATA
AGGAAAATGTTCCTGCAGCTGTTTTGTC back to topprotein sequence of rna843 >rna843-protein ID=rna843-protein|Name=rna843|organism=Nannochloropsis gaditana|type=polypeptide|length=155bp
MGSLKRLRKELQAIEKTSDTDMELWPQEDNIRLWHAIIQGPGETPFEGGT
FELRIEVGTDYPIRPPVIRFVTHIFHPNIHFETGEICLDILKKEWSPAWS
LQTACRAVVALLAAPDAESPLNCDAGNMLRAGDVRAYNAMARLYTVEYGS
ATRRG back to topmRNA from alignment at CM002456.1:552048..552870- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna843 ID=rna843|Name=rna843|organism=Nannochloropsis gaditana|type=mRNA|length=823bp|location=Sequence derived from alignment at CM002456.1:552048..552870- (Nannochloropsis gaditana)
TGCAGCTTTTGCTATGGGTTCCTTAAAAAGGCTTCGCAAGGTAAGCCTTC
CTCGGTTCATCCTTCCGCAAACGTGAGAATTCCCTCTCCATCCGCGCTCT
TGACTCAACCAAAGACATCAATTGCACCAGGAGCTCCAGGCTATAGAAAA
AACTTCCGATACAGACATGGAACTTTGGCCCCAGGAGGACAATATTCGAC
TGTGGCATGCCATTATACAAGGACCCGGGGAGACCCCCTTCGAAGGGGGG
ACTTTTGAGCTCCGCATCGAAGTGGGCACGGACTATCCCATCCGTCCTCC
TGTCATCCGCTTCGTCACACATATCTTTCACCCAAACATTCACTTCGAGA
CGGGTGAAATCTGCCTCGATATCTTGAAGAAGGAGTGGTCACCCGCATGG
AGCCTTCAAACTGCGTGCCGGGCGGTGGTTGCTTTGCTCGCCGCACCGGA
TGCCGAGAGCCCATTGAATTGCGACGCCGGCAACATGCTACGGGCGGGTG
ATGTGCGGGCCTACAATGCCATGGCACGCTTGTATACGGTGGAATATGGG
TCTGCGACACGTCGAGGTTGAGGTTGGCCCCAGGATGTGCAGACAGGTGT
GCATAAAGAAAACTTGACCCAGGTAAAAAAAAGTCATAGATTTCAAAGAT
GATTCGAAACGGACGCAAGGCTCACCAGATTTATCATAAAAGGTGCGGAC
GCATGCGGACGCAGATTTTTTTTTCTCTCGGTTATTTATGTTACCGCCCT
TCCCACTTTCCGGCGCAAGCACTATGTCCGGACCAAGGACCCCTAGAAAG
GATTGTGCTCCTCCAAGAATTCC back to topCoding sequence (CDS) from alignment at CM002456.1:552048..552870- >rna843 ID=rna843|Name=rna843|organism=Nannochloropsis gaditana|type=CDS|length=936bp|location=Sequence derived from alignment at CM002456.1:552048..552870- (Nannochloropsis gaditana)
GAGCTCCAGGCTATAGAAAAAACTTCCGATACAGACATGGAACTTTGGCC
CCAGGAGGACAATATTCGACTGTGGCATGCCATTATACAAGGACCCGGGG
AGACCCCCTTCGAAGGGGGGACTTTTGAGCTCCGCATCGAAGTGGGCACG
GACTATCCCATCCGTCCTCCTGTCATCCGCTTCGTCACACATATCTTTCA
CCCAAACATTCACTTCGAGACGGGTGAAATCTGCCTCGATATCTTGAAGA
AGGAGTGGTCACCCGCATGGAGCCTTCAAACTGCGTGCCGGGCGGTGGTT
GCTTTGCTCGCCGCACCGGATGCCGAGAGCCCATTGAATTGCGACGCCGG
CAACATGCTACGGGCGGGTGATGTGCGGGCCTACAATGCCATGGCACGCT
TGTATACGGTGGAATATGGGTCTGCGACACGTCGAGGTTGAATGGGTTCC
TTAAAAAGGCTTCGCAAGGAGCTCCAGGCTATAGAAAAAACTTCCGATAC
AGACATGGAACTTTGGCCCCAGGAGGACAATATTCGACTGTGGCATGCCA
TTATACAAGGACCCGGGGAGACCCCCTTCGAAGGGGGGACTTTTGAGCTC
CGCATCGAAGTGGGCACGGACTATCCCATCCGTCCTCCTGTCATCCGCTT
CGTCACACATATCTTTCACCCAAACATTCACTTCGAGACGGGTGAAATCT
GCCTCGATATCTTGAAGAAGGAGTGGTCACCCGCATGGAGCCTTCAAACT
GCGTGCCGGGCGGTGGTTGCTTTGCTCGCCGCACCGGATGCCGAGAGCCC
ATTGAATTGCGACGCCGGCAACATGCTACGGGCGGGTGATGTGCGGGCCT
ACAATGCCATGGCACGCTTGTATACGGTGGAATATGGGTCTGCGACACGT
CGAGGTTGAATGGGTTCCTTAAAAAGGCTTCGCAAG back to top
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