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Properties
| Property Name | Value |
|---|
| Product | dna mismatch repair protein |
| Orig transcript id | gnl|cribi|Naga_100224g1.5618.mrna |
| Orig protein id | gnl|cribi|Naga_100224g1.5618 |
| Gene | PMS2 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:606669..609102 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8411 ID=rna8411|Name=rna8411|organism=Nannochloropsis gaditana|type=mRNA|length=726bp
ATGGAGGCGGAGGAATGTGAAGGCAGGGAAGGAGGGCCGGAGGGAAGGGA
GGGAGGGAGGGCTAACGGGGAGAAGGAGAGTGTTTCCATTGCGGGGAGGG
ACACGGAGGCCGCCGCCCGAGTCTTCTCCCGGGTGCTGACCAAATCGCAT
TTGAAACGGCTGGTGGTGCTTGGACAGTTCAATTTAGGCTTCATTATCGC
GCGCATCGGTGCCGACGTCTTTATCCTCGACCAGCACGCCTGCGACGAGA
AGTACAACTTCGAGACACTTCAGAGCACCACCACCCTGCACGAACAGCGC
CTGATCGCTCCCAAGCCCCTGGAACTGAGCGCGATGGAGGAAGTGGTCAT
CCTCGAGCACCTCCCGACCTTCAAAGCCAACGGTTTCTCTTTCCGTGTGG
ACCCGGAGGCGGGCCCCATGGAACGGATCAAGCTCCTTTCCCTCCCCTAC
TCGAAAGGCATTCAGTTTGGGCTGCAGGACATCCACGAGCTCGCGTCCCT
TTTGGGCGACTCGTCCTTCTGTGGCGGGGTGGAGGAGGGGGCGGAAGGGC
CCGCCCCCTCGGTTCGGCTGCCCAAAATTCGCGCCATGTTCGCCTCCCGG
GCTTGCCGGATGTCGATCATGATCGGAAAGGCCTTGACGCGGTCACAGGT
AGGGAGGGGAGCGTGGGCAGAACCCCTGTTGGGAAGGCGCAGAAAAGGGG
GGGGGGGAAGGACTTGGTGGTCGTAG back to topprotein sequence of rna8411 >rna8411-protein ID=rna8411-protein|Name=rna8411|organism=Nannochloropsis gaditana|type=polypeptide|length=287bp
MKRVLISFPYNDKICRWATWMTLTKDQGEMDSFAAHVDEDIVVPSLFARD
TPRACVEKEEGERPDRMEEDEKQEPPTNQHVQQRAAPEIKAIDRSSVARI
CSGQVVIDLATAVKELVENSLDAGATQVEVKLKNWGVESIEVSDNGSGVA
PQNFQALTLKYHTSKLSTFADLESVASFGFRGEALSSLCEIAGAFEVSTR
GENEAIGAKIVYDRSGKILSQTPTARQRGTTVCVARLFEPLPVRRAEFKR
TVPKQSAKLLRNLQAYALVATNVRITCSNTKGAKGIR back to topmRNA from alignment at KK037248.1:606669..609102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8411 ID=rna8411|Name=rna8411|organism=Nannochloropsis gaditana|type=mRNA|length=2434bp|location=Sequence derived from alignment at KK037248.1:606669..609102- (Nannochloropsis gaditana)
ATGAAAAGAGTGTTAATTAGTTTCCCGTACAACGATAAAATCTGTCGATG
GGCGACGTGGATGACACTGACGAAGTCTAAAGTATAAATAAAGCATACAT
ATGAGTGTGTATGTGTAGGACGCGCTAATAACACTTGAAATGGAAAAATA
AATTGGATCAAAAGGGATATGCGCGTGTGTTAAGGGGAGCGAGAGCGTAT
GGATATGATTTAAATACGTGAAATTGACACACAATTTATTGCCGTTGATT
TATTTGTCTGGTCATGATCATAATGATAATAATTATTCCTCACGTCTCTA
TCAAATAAAAAAATGCGCGCTGCCTTCCTCGCTGACAGCTCGTAAGCGCC
GTTACTTAAAATCTGAGAGTGAGGTAATCCAAAAGTACCTCCAGGTATCC
GGAAATATACTTGACTTAGATCTAGCATTAAAAAGTCACGGCACCAATAA
AAGTCAAAGTTCTAATCTGTTTTGAAGACAGTATCGACTTGATTGCGTGT
TTGAACGATGCGATACTCAGCTGGTGCAATTCTGGCATAAATCCTCCGTC
TAAGCGAGAATCGAAGCCGCTCAACACTGCACTCCTGTCATCCACGAGAT
CTCATATCATTTTTTTATTATTTTAAACTCTCACTACGCCCACCGTTGGG
AAAGAATTTAGTCCTGGGTGCGAAGTATGGTTTTACTTTTTACTGTCTTG
CTGCGAGCTTATTTAGTTTCCAGGGTTACCCCCGAACGGCGAACGTTGTC
CTCGCTTTCGCCGTCGGAGTTTCGGAACCACGTCTCGTAACACCTCCACG
AGTCACAAAGTACTCAGGAAGACTCCCCTCTCATGTTACCTTACATTCAA
AGTGTTAGGGATCAGGGAGAAATGGATTCCTTTGCCGCCCATGTGGACGA
AGACATTGTCGTCCCGTCGCTGTTCGCGCGAGATACCCCAAGGGCCTGTG
TGGAAAAAGAGGAAGGGGAAAGACCAGACAGGATGGAGGAGGACGAAAAG
CAAGAGCCCCCCACAAATCAGCACGTGCAACAGCGTGCAGCGCCCGAAAT
CAAGGCGATCGATCGATCTTCGGTTGCGCGAATTTGTTCAGGACAGGTAC
AAGACGCAAACTGAGACTGAGGCACTTCCACGCATCCCATTCTTCCTTTA
TTCAAATTGTTTTCCTACCAAAGGTGGTCATTGACCTAGCCACTGCTGTG
AAGGAGTTAGTGGAGAACTCTTTGGATGCCGGGGCCACACAGGTAAGAAC
GTGTTGGGTACTGTAGCATGGATCAGGTCCCTTTCTGTCACTGACCTCCC
CTGGTGTACCGGCAGGTCGAGGTTAAATTGAAAAATTGGGGCGTGGAATC
AATTGAGGTCTCAGACAATGGAAGTGGTGTTGCGCCGCAGAATTTCCAGG
TGCGTGACAAGAAATGGAGCAGAGGAGAGGACAGGGCGTGAAAGGGGGAT
ACACCCTCTTTGCTTTTCCCTATTGCCAGGTTCGTGATAATGCACATGTT
TCAGGGCACACGAGCCTGCTTGTGAAGTAAATCGTGTCTTGCTTATGGCC
CTCGTGCTATCTGAATATATAAGTCATATGTCTGTTCCGAGTCTCCGCTA
CTCCCTCCCTTCCTCCCTCACCTCCTCCTCCCTTTCTCCCTTTCCCCCTT
TTTTAAGGCCCTGACCCTCAAGTATCACACGAGCAAACTCTCCACTTTCG
CCGATCTAGAATCAGTCGCTTCCTTCGGCTTTCGGGGGGAGGCCCTGTCC
TCTCTGTGTGAGATTGCGGGGGCCTTCGAAGTGAGCACACGAGGGGAGAA
CGAGGCCATTGGCGCCAAGATCGTCTATGACCGGTGCGTGGGATAGGGAG
GATGGTGGAGAGACAAGGATGGGGAGGGAAGGAGAAAAGGGTGGTGGAGA
GAGAGAGGGGTGGGTAGGAAAACGGAAGAGGGTCACAAAGCCGACGCGGA
AGGGAGACTGCGCGCGCAGGGAGGGATGGAGGGGAGGGGTAGAAAGAGGC
AGGTGCCCCAGCTTCCTTTCAACGGGCAAAGGCGCCTCACCCTGACCTAG
CCCTTTCGTTCCCTTTTGTCGGTCCAGGAGCGGCAAGATCCTTTCCCAGA
CCCCAACCGCCCGCCAGCGAGGGACCACAGTCTGCGTGGCCAGACTCTTC
GAGCCCCTGCCCGTGCGGAGGGCGGAGTTCAAACGGTGTGGGAGGGAGAC
AAGACAAGGAAGGGAGGACGGGCGGCGCGGGATACGCGAGGTCTAGAGAG
CCGGTTGCCTCCTCACCGTCTCCTTCCTCTCCCTCTACCCCCTCTGTCTC
CCTCCCCTCCCTCCCCTAGGACGGTCCCCAAGCAGTCCGCCAAACTCTTA
AGGAATCTTCAAGCCTACGCCCTGGTCGCGACGAATGTGCGGATCACGTG
CTCCAACACCAAGGGCGCGAAAGGCATCAGGTGA back to topCoding sequence (CDS) from alignment at KK037248.1:606669..609102- >rna8411 ID=rna8411|Name=rna8411|organism=Nannochloropsis gaditana|type=CDS|length=6048bp|location=Sequence derived from alignment at KK037248.1:606669..609102- (Nannochloropsis gaditana)
GACGGTCCCCAAGCAGTCCGCCAAACTCTTAAGGAATCTTCAAGCCTACG
CCCTGGTCGCGACGAATGTGCGGATCACGTGCTCCAACACCAAGGGCGCG
AAAGGCATCAGGTGAGAGCGGCAAGATCCTTTCCCAGACCCCAACCGCCC
GCCAGCGAGGGACCACAGTCTGCGTGGCCAGACTCTTCGAGCCCCTGCCC
GTGCGGAGGGCGGAGTTCAAACGGCCCTGACCCTCAAGTATCACACGAGC
AAACTCTCCACTTTCGCCGATCTAGAATCAGTCGCTTCCTTCGGCTTTCG
GGGGGAGGCCCTGTCCTCTCTGTGTGAGATTGCGGGGGCCTTCGAAGTGA
GCACACGAGGGGAGAACGAGGCCATTGGCGCCAAGATCGTCTATGACCGG
TCGAGGTTAAATTGAAAAATTGGGGCGTGGAATCAATTGAGGTCTCAGAC
AATGGAAGTGGTGTTGCGCCGCAGAATTTCCAGGTGGTCATTGACCTAGC
CACTGCTGTGAAGGAGTTAGTGGAGAACTCTTTGGATGCCGGGGCCACAC
AGGGATCAGGGAGAAATGGATTCCTTTGCCGCCCATGTGGACGAAGACAT
TGTCGTCCCGTCGCTGTTCGCGCGAGATACCCCAAGGGCCTGTGTGGAAA
AAGAGGAAGGGGAAAGACCAGACAGGATGGAGGAGGACGAAAAGCAAGAG
CCCCCCACAAATCAGCACGTGCAACAGCGTGCAGCGCCCGAAATCAAGGC
GATCGATCGATCTTCGGTTGCGCGAATTTGTTCAGGACAGATGAAAAGAG
TGTTAATTAGTTTCCCGTACAACGATAAAATCTGTCGATGGGCGACGTGG
ATGACACTGACGAAGACGGTCCCCAAGCAGTCCGCCAAACTCTTAAGGAA
TCTTCAAGCCTACGCCCTGGTCGCGACGAATGTGCGGATCACGTGCTCCA
ACACCAAGGGCGCGAAAGGCATCAGGTGAGAGCGGCAAGATCCTTTCCCA
GACCCCAACCGCCCGCCAGCGAGGGACCACAGTCTGCGTGGCCAGACTCT
TCGAGCCCCTGCCCGTGCGGAGGGCGGAGTTCAAACGGCCCTGACCCTCA
AGTATCACACGAGCAAACTCTCCACTTTCGCCGATCTAGAATCAGTCGCT
TCCTTCGGCTTTCGGGGGGAGGCCCTGTCCTCTCTGTGTGAGATTGCGGG
GGCCTTCGAAGTGAGCACACGAGGGGAGAACGAGGCCATTGGCGCCAAGA
TCGTCTATGACCGGTCGAGGTTAAATTGAAAAATTGGGGCGTGGAATCAA
TTGAGGTCTCAGACAATGGAAGTGGTGTTGCGCCGCAGAATTTCCAGGTG
GTCATTGACCTAGCCACTGCTGTGAAGGAGTTAGTGGAGAACTCTTTGGA
TGCCGGGGCCACACAGGGATCAGGGAGAAATGGATTCCTTTGCCGCCCAT
GTGGACGAAGACATTGTCGTCCCGTCGCTGTTCGCGCGAGATACCCCAAG
GGCCTGTGTGGAAAAAGAGGAAGGGGAAAGACCAGACAGGATGGAGGAGG
ACGAAAAGCAAGAGCCCCCCACAAATCAGCACGTGCAACAGCGTGCAGCG
CCCGAAATCAAGGCGATCGATCGATCTTCGGTTGCGCGAATTTGTTCAGG
ACAGATGAAAAGAGTGTTAATTAGTTTCCCGTACAACGATAAAATCTGTC
GATGGGCGACGTGGATGACACTGACGAAGACGGTCCCCAAGCAGTCCGCC
AAACTCTTAAGGAATCTTCAAGCCTACGCCCTGGTCGCGACGAATGTGCG
GATCACGTGCTCCAACACCAAGGGCGCGAAAGGCATCAGGTGAGAGCGGC
AAGATCCTTTCCCAGACCCCAACCGCCCGCCAGCGAGGGACCACAGTCTG
CGTGGCCAGACTCTTCGAGCCCCTGCCCGTGCGGAGGGCGGAGTTCAAAC
GGCCCTGACCCTCAAGTATCACACGAGCAAACTCTCCACTTTCGCCGATC
TAGAATCAGTCGCTTCCTTCGGCTTTCGGGGGGAGGCCCTGTCCTCTCTG
TGTGAGATTGCGGGGGCCTTCGAAGTGAGCACACGAGGGGAGAACGAGGC
CATTGGCGCCAAGATCGTCTATGACCGGTCGAGGTTAAATTGAAAAATTG
GGGCGTGGAATCAATTGAGGTCTCAGACAATGGAAGTGGTGTTGCGCCGC
AGAATTTCCAGGTGGTCATTGACCTAGCCACTGCTGTGAAGGAGTTAGTG
GAGAACTCTTTGGATGCCGGGGCCACACAGGGATCAGGGAGAAATGGATT
CCTTTGCCGCCCATGTGGACGAAGACATTGTCGTCCCGTCGCTGTTCGCG
CGAGATACCCCAAGGGCCTGTGTGGAAAAAGAGGAAGGGGAAAGACCAGA
CAGGATGGAGGAGGACGAAAAGCAAGAGCCCCCCACAAATCAGCACGTGC
AACAGCGTGCAGCGCCCGAAATCAAGGCGATCGATCGATCTTCGGTTGCG
CGAATTTGTTCAGGACAGATGAAAAGAGTGTTAATTAGTTTCCCGTACAA
CGATAAAATCTGTCGATGGGCGACGTGGATGACACTGACGAAGACGGTCC
CCAAGCAGTCCGCCAAACTCTTAAGGAATCTTCAAGCCTACGCCCTGGTC
GCGACGAATGTGCGGATCACGTGCTCCAACACCAAGGGCGCGAAAGGCAT
CAGGTGAGAGCGGCAAGATCCTTTCCCAGACCCCAACCGCCCGCCAGCGA
GGGACCACAGTCTGCGTGGCCAGACTCTTCGAGCCCCTGCCCGTGCGGAG
GGCGGAGTTCAAACGGCCCTGACCCTCAAGTATCACACGAGCAAACTCTC
CACTTTCGCCGATCTAGAATCAGTCGCTTCCTTCGGCTTTCGGGGGGAGG
CCCTGTCCTCTCTGTGTGAGATTGCGGGGGCCTTCGAAGTGAGCACACGA
GGGGAGAACGAGGCCATTGGCGCCAAGATCGTCTATGACCGGTCGAGGTT
AAATTGAAAAATTGGGGCGTGGAATCAATTGAGGTCTCAGACAATGGAAG
TGGTGTTGCGCCGCAGAATTTCCAGGTGGTCATTGACCTAGCCACTGCTG
TGAAGGAGTTAGTGGAGAACTCTTTGGATGCCGGGGCCACACAGGGATCA
GGGAGAAATGGATTCCTTTGCCGCCCATGTGGACGAAGACATTGTCGTCC
CGTCGCTGTTCGCGCGAGATACCCCAAGGGCCTGTGTGGAAAAAGAGGAA
GGGGAAAGACCAGACAGGATGGAGGAGGACGAAAAGCAAGAGCCCCCCAC
AAATCAGCACGTGCAACAGCGTGCAGCGCCCGAAATCAAGGCGATCGATC
GATCTTCGGTTGCGCGAATTTGTTCAGGACAGATGAAAAGAGTGTTAATT
AGTTTCCCGTACAACGATAAAATCTGTCGATGGGCGACGTGGATGACACT
GACGAAGACGGTCCCCAAGCAGTCCGCCAAACTCTTAAGGAATCTTCAAG
CCTACGCCCTGGTCGCGACGAATGTGCGGATCACGTGCTCCAACACCAAG
GGCGCGAAAGGCATCAGGTGAGAGCGGCAAGATCCTTTCCCAGACCCCAA
CCGCCCGCCAGCGAGGGACCACAGTCTGCGTGGCCAGACTCTTCGAGCCC
CTGCCCGTGCGGAGGGCGGAGTTCAAACGGCCCTGACCCTCAAGTATCAC
ACGAGCAAACTCTCCACTTTCGCCGATCTAGAATCAGTCGCTTCCTTCGG
CTTTCGGGGGGAGGCCCTGTCCTCTCTGTGTGAGATTGCGGGGGCCTTCG
AAGTGAGCACACGAGGGGAGAACGAGGCCATTGGCGCCAAGATCGTCTAT
GACCGGTCGAGGTTAAATTGAAAAATTGGGGCGTGGAATCAATTGAGGTC
TCAGACAATGGAAGTGGTGTTGCGCCGCAGAATTTCCAGGTGGTCATTGA
CCTAGCCACTGCTGTGAAGGAGTTAGTGGAGAACTCTTTGGATGCCGGGG
CCACACAGGGATCAGGGAGAAATGGATTCCTTTGCCGCCCATGTGGACGA
AGACATTGTCGTCCCGTCGCTGTTCGCGCGAGATACCCCAAGGGCCTGTG
TGGAAAAAGAGGAAGGGGAAAGACCAGACAGGATGGAGGAGGACGAAAAG
CAAGAGCCCCCCACAAATCAGCACGTGCAACAGCGTGCAGCGCCCGAAAT
CAAGGCGATCGATCGATCTTCGGTTGCGCGAATTTGTTCAGGACAGATGA
AAAGAGTGTTAATTAGTTTCCCGTACAACGATAAAATCTGTCGATGGGCG
ACGTGGATGACACTGACGAAGACGGTCCCCAAGCAGTCCGCCAAACTCTT
AAGGAATCTTCAAGCCTACGCCCTGGTCGCGACGAATGTGCGGATCACGT
GCTCCAACACCAAGGGCGCGAAAGGCATCAGGTGAGAGCGGCAAGATCCT
TTCCCAGACCCCAACCGCCCGCCAGCGAGGGACCACAGTCTGCGTGGCCA
GACTCTTCGAGCCCCTGCCCGTGCGGAGGGCGGAGTTCAAACGGCCCTGA
CCCTCAAGTATCACACGAGCAAACTCTCCACTTTCGCCGATCTAGAATCA
GTCGCTTCCTTCGGCTTTCGGGGGGAGGCCCTGTCCTCTCTGTGTGAGAT
TGCGGGGGCCTTCGAAGTGAGCACACGAGGGGAGAACGAGGCCATTGGCG
CCAAGATCGTCTATGACCGGTCGAGGTTAAATTGAAAAATTGGGGCGTGG
AATCAATTGAGGTCTCAGACAATGGAAGTGGTGTTGCGCCGCAGAATTTC
CAGGTGGTCATTGACCTAGCCACTGCTGTGAAGGAGTTAGTGGAGAACTC
TTTGGATGCCGGGGCCACACAGGGATCAGGGAGAAATGGATTCCTTTGCC
GCCCATGTGGACGAAGACATTGTCGTCCCGTCGCTGTTCGCGCGAGATAC
CCCAAGGGCCTGTGTGGAAAAAGAGGAAGGGGAAAGACCAGACAGGATGG
AGGAGGACGAAAAGCAAGAGCCCCCCACAAATCAGCACGTGCAACAGCGT
GCAGCGCCCGAAATCAAGGCGATCGATCGATCTTCGGTTGCGCGAATTTG
TTCAGGACAGATGAAAAGAGTGTTAATTAGTTTCCCGTACAACGATAAAA
TCTGTCGATGGGCGACGTGGATGACACTGACGAAGACGGTCCCCAAGCAG
TCCGCCAAACTCTTAAGGAATCTTCAAGCCTACGCCCTGGTCGCGACGAA
TGTGCGGATCACGTGCTCCAACACCAAGGGCGCGAAAGGCATCAGGTGAG
AGCGGCAAGATCCTTTCCCAGACCCCAACCGCCCGCCAGCGAGGGACCAC
AGTCTGCGTGGCCAGACTCTTCGAGCCCCTGCCCGTGCGGAGGGCGGAGT
TCAAACGGCCCTGACCCTCAAGTATCACACGAGCAAACTCTCCACTTTCG
CCGATCTAGAATCAGTCGCTTCCTTCGGCTTTCGGGGGGAGGCCCTGTCC
TCTCTGTGTGAGATTGCGGGGGCCTTCGAAGTGAGCACACGAGGGGAGAA
CGAGGCCATTGGCGCCAAGATCGTCTATGACCGGTCGAGGTTAAATTGAA
AAATTGGGGCGTGGAATCAATTGAGGTCTCAGACAATGGAAGTGGTGTTG
CGCCGCAGAATTTCCAGGTGGTCATTGACCTAGCCACTGCTGTGAAGGAG
TTAGTGGAGAACTCTTTGGATGCCGGGGCCACACAGGGATCAGGGAGAAA
TGGATTCCTTTGCCGCCCATGTGGACGAAGACATTGTCGTCCCGTCGCTG
TTCGCGCGAGATACCCCAAGGGCCTGTGTGGAAAAAGAGGAAGGGGAAAG
ACCAGACAGGATGGAGGAGGACGAAAAGCAAGAGCCCCCCACAAATCAGC
ACGTGCAACAGCGTGCAGCGCCCGAAATCAAGGCGATCGATCGATCTTCG
GTTGCGCGAATTTGTTCAGGACAGATGAAAAGAGTGTTAATTAGTTTCCC
GTACAACGATAAAATCTGTCGATGGGCGACGTGGATGACACTGACGAA back to top
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