rna8402, rna8402 (mRNA) Nannochloropsis gaditana

Overview
Namerna8402
Unique Namerna8402
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2846
Alignment locationKK037248.1:579908..580962 -

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Properties
Property NameValue
ProductBEACH domain containing protein
Orig transcript idgnl|cribi|Naga_102028g1.5883.mrna
Orig protein idgnl|cribi|Naga_102028g1.5883
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:579908..580962 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102028g1gene8142Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8402rna8402-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22298.1cds8375Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8402 ID=rna8402|Name=rna8402|organism=Nannochloropsis gaditana|type=mRNA|length=2846bp
CCCTCCCTTCCGCCCTCCCTCCCTCCCTTCCGCCCTCAGGCCGGCGACCG
CGTGGACGACGTCCTCCTTCCCCCCTGGGCCCCCACCGCCGAAGATTTCA
TCCGCCTGAACCGCGCGGCCTTGGAAAGCGAGATCGTCTCCTCCCGGCTG
CACCTCTGGATCGACCTGGTCTTCGGCCACGCCCAACGCGGGCCTGCCTC
CATCCCCGCCAAGAACGTGTTTTTCTACTTGACCTATGCTGGCGCGGTGG
ACCTGGCTCAGATCGAGGACCCCGCACTGCGTCGGGCCACGGAGATGCAA
ATCGCCTACTTCGGACAGTGCCCCGCCCAACTCTTCCCCTCTCAGCCCCA
CCCCCCCCGGGACTTCCCGTCCCAGGTCATCTACCGACCGCTTCGAAGCC
TCCTCCGTCGGGCTCTTCCCCTCCCCACCCACTTTCTGACGGGGGAGCAA
CGCGGCGGCTGGGATTTGCCGGAGCCGGTGGTGACGATCGAGGCGGACCA
TCACCTGGTGGCAGTGCGGGTTCTGCCCACCAAGATATTGACCGTGAATG
CCCGCGGTGTCCTCACTTTCTATGCCTGGCAGGCCTCCTTCAGGAACGCC
GAGCCCAAGGACTTCAGTCGCCTTCCCCCCCCTTCCCTCTCTCCTTCCCT
CCCTCCGTCCTCTGCCTACCCGGCCCATAATCATCCTCGCGGTCCTCCCT
CCCTTCCCTCCCCTTCCCCTTCCGGCTCCACTTTCCTCCTGGACGCCGGG
CCGCACCCTCCGTTGCCCTCGAACGAATGCGTCACACCCACCGCCGCCTA
CACCTACGACCCTGCGCTGGCACTCCAAGAGCCCGCTCTCCTCTGGCGGG
ACGGAGGGAACGAGGCGGAGGAAGGGGGAAAGGAAGCAGAAAAACTGGGG
TCCAAGGGCGAGGGTCAGGGCGAGGGGGAGGGCGAAAGCCTTCGACCTGC
ACCAGCTTCCGGTTCCCGCCCTTCAGGAATAGACGGGGATCCATCTTCTA
ATCCCAACACGACCACATCGATGCACGGAAGCGGCAGCCACGGCAGTACG
ACTTCCCTGCCCGCCTCCCACTCTGATCCTCAGCGTCCTCAAATACTCAA
ACTCTCCCTCCACCGGGACCGAACGCCCATCGAGCAGGTACCTCGGATTC
CCCCCCCCCCTCTTCCTTCCACGGGCCCCTTCCCCCCTTTCCCCCTCCAC
ATCACTAGCTCCGGTCGCTTTGTTTTGGGTGCCGGGGCGCCCATGGGCAT
AGTGCACTTGGTCGAGGTGGACGTGGAGACCGGAGCCGTGGTTGGGGAGG
CCCAGATGCTCGGGCACACCCAAGCAGTCCTCTGTGTCGCCAGCGCCGGC
CTGGAGGCCTCAGGGATGGAATTGGTGCTCACCGGGTCCCGGGACGGCAC
CGGCTTGCTCTGGCGCCTGGGGCGATTACAGGCCAAGACGAAGCGACCGG
TGTGTTTTCGACGCCCCGAGCGTGTCTTGCTCGGCCACGGGGGCCCTGTC
CTGGCCTGTGCCCTTTCTTATGCCCTGGGTATCGCGGCTACGGCCTCGGA
CGGCCAAGTCTTGCTCCACGCGATCGAGGCCCCTACGCTGGTACGACGGA
TCCACATGCCGCGGGCGCTGCGGGCCAATGGCTGGAGGTTTCGGGATTGC
CTGTTGGTGGACGAGGGCCTGGTCGTGGTGGGGATGGAGGGCGGGGGGGA
AGGCGGGGGGGAGGGCGGGCGAATTCAGGTCTGGACCATTAACGGGAACC
TGGTGGCGGAGCGAGAGATCGAGCCGGCAGGGGTGAGAGAGGAGGGTTTG
GAGGGCTCCAGAGCCAGTCATGGCTCCCTTGCCCGCCTTGCCGTCATTGG
GGCGGCGCGCGGGGACGGAGGTGTCCTCCTTGTCGCCTATCGAGACGGAC
GTGTCGATTTTTACGGGGTGATGGACCTGGAGCTCGTGGGCTCCTACCGT
CTGACCGCCCCGCCCTCCCTCCCGCCCTCCCTCCCGCCCTCCTTGACTCC
CCACCTGGCCTGCGTCGACGCCGGACCCTCCCCCACCACCCCCGTGCTCC
TCGCCTGTGGCACCACCGACGGCACCCTGGTGGTGGCGGGCCTGCCCCTG
ATCCATTTCCTCAAAGACTTGGAGGGGAGCAACAGCTTTACTCAAGCCCT
GCTCCAATCCTTCCCTTTGAAAATGGCTCAAGGCGCCGTGAACATGGCGG
CCACCACGATCGGACGGGCCCGCGGCATGGCCTCTCAGGCCAAGGGGGTG
GCGATAGAAGCATTGGGGGAGGCCCAGACACTGGTACGGGAGATGCGTAG
GGGGGGGTTGGGGGGGGTGTGGGGCATGCTGAAAGGAGGGCGATAAGGAC
GGAGGGGAAGGCTATTAAGGGAAGAGGAGGAAAGTGGCCAAAGCAGGGTC
CTTGTGAGGGGTATGCCGGGTCAGACGCGTTGCGGCGGGCACGGGAAGCA
CGATGATGTCGAAGCAAAAGGCGTGTGTGGGATGTGTGTGAGCTCAGGTC
TTTTGTGGGGGAGGATCTGGCGGCAGGCATGGGCCAATGTTGAGAAATTG
TAAATATGTGGATAAGATCCAGCCCACGTTTTAGGGGCAGGAGCATTGGA
AATTGGATGCGTGGTGAACGTGCACGGGTGCAGCTATGGGGTCCTGGGAG
CCAAATTTGAAAGATAAGACTTGTATAGCCAGAGATTTGATCAGGGAGGG
GGCAGGTGATGGAAAAACGCGAGCAGAAAATCTGGGCGGGACGACAAGAA
GCCAAAGGGACGACAAGAAGCAAACTAGTCACCCTCCGCTTGGGCATCGT
ACAACGGAAGAAATCAAAATAAAATCTCTCAATTTGACTCGCTTGA
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protein sequence of rna8402

>rna8402-protein ID=rna8402-protein|Name=rna8402|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSG
RSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNEIPSYRS
SCTGAITRRPPESSCTT
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mRNA from alignment at KK037248.1:579908..580962-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8402 ID=rna8402|Name=rna8402|organism=Nannochloropsis gaditana|type=mRNA|length=1055bp|location=Sequence derived from alignment at KK037248.1:579908..580962- (Nannochloropsis gaditana)
GGGGTGAGGCTGGTCACGCCCCTTCGGCTCTACGAGGGAGAAGCGGTGCT
GACCCGGACGTCCCTCTACTTCTTCGCCGACACAGGAGAGAAACCAGGGG
AGGGGAAGTCGGAGGAAGGGGGGCAGGGCGGGAGGGAGGGCGGGGCCCTG
GGCCGGCGGCGGTGGGTGCTGGGGGATCTGGCCGGAGTCTTCCTCCGGCG
GTTCCTGCTCCGGGACAGCGCGGTGGAAATTTTCCTTCGCCGGGGCCGGC
ACCGTTCATTCTTCCTGGACTTTGGGCGGGGGAACGATGGGGAGGGAGGG
AAGGAGAGCCGACGCCGGGACGCTTTCCTCTGGCGCATGTTTCCTCTCCT
CCCACGCCTGGCGTGGCGGCAGCCACCGCGGACTTCCCCGGATTTTTTGT
TAAGGAGACATCAAGTGACGCAAGCCTGGCAACGCCGGGAGATTTCCAAT
TATGACTATTTGATGGCTTTAAATACCATGGTAAGGGAGGGAAAGGGGGA
CAGAGGGAAGGAGGGAGGGGGGAGAGAGGGGCCGGAAGAGGAAGCGACTG
GCACGGCCAAGCATCCGCTTTCTTCCCACCCACAGCCCTGTTTTCCGTCC
CTCCCTCCCTCCCTTACACCCTCCGTAGAGCGGCCGCTCCTTCAACGATT
TGTCCCAGTACCCCGTCTTCCCCTGGGTCCTGAGTAACTACACGTCATCC
TCTTTGGATTTAGACGACCCGAAAAACTACCGGGACCTGAGCAAGCCCAT
GGGGGCGCTGAACGAGGTAGGATGGGTCCTATCGTCTTTCCCTCTTTCCT
TCCCTCCCTCCCTGCCTCCCTCCCTCCGCTTCGGATGTGCCTATGTGCAC
CCGTGCCAGACGACCCCTGCATCTTGCTCAAGCCCTCCTTCTTCCCTCCC
TCCCTCCCACCCTCCCTCCCTCCCTCCCCCCCTCCCTCAGGCGCGATGGG
CCGAGTTCTCCGAGCGTTACGAGTCCTTCTCAGATCCCGTCATACCGAAG
TTCATGTACGGGAGCCATTACTCGACGGCCGCCGGAGTCGTCTTGCACTA
CCTAG
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Coding sequence (CDS) from alignment at KK037248.1:579908..580962-

>rna8402 ID=rna8402|Name=rna8402|organism=Nannochloropsis gaditana|type=CDS|length=1062bp|location=Sequence derived from alignment at KK037248.1:579908..580962- (Nannochloropsis gaditana)
ATCCCGTCATACCGAAGTTCATGTACGGGAGCCATTACTCGACGGCCGCC
GGAGTCGTCTTGCACTACCTAGAGCGGCCGCTCCTTCAACGATTTGTCCC
AGTACCCCGTCTTCCCCTGGGTCCTGAGTAACTACACGTCATCCTCTTTG
GATTTAGACGACCCGAAAAACTACCGGGACCTGAGCAAGCCCATGGGGGC
GCTGAACGAGATGTTTCCTCTCCTCCCACGCCTGGCGTGGCGGCAGCCAC
CGCGGACTTCCCCGGATTTTTTGTTAAGGAGACATCAAGTGACGCAAGCC
TGGCAACGCCGGGAGATTTCCAATTATGACTATTTGATGGCTTTAAATAC
CATGATCCCGTCATACCGAAGTTCATGTACGGGAGCCATTACTCGACGGC
CGCCGGAGTCGTCTTGCACTACCTAGAGCGGCCGCTCCTTCAACGATTTG
TCCCAGTACCCCGTCTTCCCCTGGGTCCTGAGTAACTACACGTCATCCTC
TTTGGATTTAGACGACCCGAAAAACTACCGGGACCTGAGCAAGCCCATGG
GGGCGCTGAACGAGATGTTTCCTCTCCTCCCACGCCTGGCGTGGCGGCAG
CCACCGCGGACTTCCCCGGATTTTTTGTTAAGGAGACATCAAGTGACGCA
AGCCTGGCAACGCCGGGAGATTTCCAATTATGACTATTTGATGGCTTTAA
ATACCATGATCCCGTCATACCGAAGTTCATGTACGGGAGCCATTACTCGA
CGGCCGCCGGAGTCGTCTTGCACTACCTAGAGCGGCCGCTCCTTCAACGA
TTTGTCCCAGTACCCCGTCTTCCCCTGGGTCCTGAGTAACTACACGTCAT
CCTCTTTGGATTTAGACGACCCGAAAAACTACCGGGACCTGAGCAAGCCC
ATGGGGGCGCTGAACGAGATGTTTCCTCTCCTCCCACGCCTGGCGTGGCG
GCAGCCACCGCGGACTTCCCCGGATTTTTTGTTAAGGAGACATCAAGTGA
CGCAAGCCTGGCAACGCCGGGAGATTTCCAATTATGACTATTTGATGGCT
TTAAATACCATG
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Synonyms
Publications