EWM22298.1, cds8375 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|585102782|gb|EWM22298.1| (BEACH domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 240.35 bits (612), Expect = 1.782e-80 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
Query: 1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNEIPSYRSSCTGAITRRPPESSCTT 117
MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNEIPSYRSSCTGAITRRPPESSCTT
Sbjct: 1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNEIPSYRSSCTGAITRRPPESSCTT 117
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|971512924|dbj|GAQ85273.1| (WD-40 repeat family protein [Klebsormidium nitens]) HSP 1 Score: 127.872 bits (320), Expect = 7.936e-32 Identity = 57/76 (75.00%), Postives = 66/76 (86.84%), Query Frame = 0
Query: 18 PDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
PD LLRR + + W RREISN+DYLM LNT++GRSFNDL+QYPVFPWVL++YTS LDLDDPK YRDLSKP+GALN
Sbjct: 2336 PDRLLRRSGLMEKWARREISNFDYLMHLNTLAGRSFNDLTQYPVFPWVLADYTSKVLDLDDPKVYRDLSKPVGALN 2411
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|961496303|emb|CDS27071.2| (neurobeachin [Hymenolepis microstoma]) HSP 1 Score: 117.857 bits (294), Expect = 2.564e-31 Identity = 52/68 (76.47%), Postives = 62/68 (91.18%), Query Frame = 0
Query: 26 QVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
Q TQ WQRRE+SN+DYLM LNT++GRSFNDL+QYP+FPWVLSNYTS LDL++P NYRDLSKP+GAL+
Sbjct: 47 QATQRWQRREMSNFDYLMCLNTLAGRSFNDLNQYPIFPWVLSNYTSKHLDLNEPANYRDLSKPVGALS 114
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|303279763|ref|XP_003059174.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226459010|gb|EEH56306.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 124.405 bits (311), Expect = 9.712e-31 Identity = 52/77 (67.53%), Postives = 67/77 (87.01%), Query Frame = 0
Query: 18 PDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNE 94
P+ L R+ +TQ W RREISN+DYLMALNTMSGR++ND++QYPVFPWV+++Y S +LD +DPK +RDLSKP+GALNE
Sbjct: 43 PEALFRKSNLTQRWCRREISNFDYLMALNTMSGRTYNDITQYPVFPWVIADYESETLDFNDPKTFRDLSKPVGALNE 119
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|197260814|gb|ACH56907.1| (kinase A-anchor protein neurobeachin, partial [Simulium vittatum]) HSP 1 Score: 118.242 bits (295), Expect = 1.072e-30 Identity = 54/83 (65.06%), Postives = 67/83 (80.72%), Query Frame = 0
Query: 11 RQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
R+ SP L+R +TQ WQRREISN++YLM LNT++GR++NDL+QYPVFPWVL+NY S+ LDL P NYRDLSKP+GALN
Sbjct: 81 RRASMMSPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYDSTELDLSQPSNYRDLSKPIGALN 163
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|673041135|ref|XP_008874528.1| (hypothetical protein H310_10062 [Aphanomyces invadans] >gi|574469737|gb|ETV96750.1| hypothetical protein H310_10062 [Aphanomyces invadans]) HSP 1 Score: 124.02 bits (310), Expect = 1.623e-30 Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0
Query: 1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
+ + PR +Q PR SP ++ +T+AWQ R +SNYDYLMALNT+SGRSFNDL+QYPVFPWVLSNYTS LDL DP NYR L++PMGALN
Sbjct: 1359 ILAMCPRTTIKQWPRMSPGRIVG--NLTKAWQMRVMSNYDYLMALNTVSGRSFNDLTQYPVFPWVLSNYTSDHLDLADPANYRPLNQPMGALN 1449
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|673041133|ref|XP_008874527.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574469738|gb|ETV96751.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 124.02 bits (310), Expect = 1.785e-30 Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0
Query: 1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
+ + PR +Q PR SP ++ +T+AWQ R +SNYDYLMALNT+SGRSFNDL+QYPVFPWVLSNYTS LDL DP NYR L++PMGALN
Sbjct: 1359 ILAMCPRTTIKQWPRMSPGRIVG--NLTKAWQMRVMSNYDYLMALNTVSGRSFNDLTQYPVFPWVLSNYTSDHLDLADPANYRPLNQPMGALN 1449
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|673041137|ref|XP_008874529.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|673041139|ref|XP_008874530.1| hypothetical protein, variant 3 [Aphanomyces invadans] >gi|574469739|gb|ETV96752.1| hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574469740|gb|ETV96753.1| hypothetical protein, variant 3 [Aphanomyces invadans]) HSP 1 Score: 123.635 bits (309), Expect = 2.104e-30 Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0
Query: 1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
+ + PR +Q PR SP ++ +T+AWQ R +SNYDYLMALNT+SGRSFNDL+QYPVFPWVLSNYTS LDL DP NYR L++PMGALN
Sbjct: 1359 ILAMCPRTTIKQWPRMSPGRIVG--NLTKAWQMRVMSNYDYLMALNTVSGRSFNDLTQYPVFPWVLSNYTSDHLDLADPANYRPLNQPMGALN 1449
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|1134547467|gb|OMH84569.1| (Neurobeachin-like protein 2 [Zancudomyces culisetae]) HSP 1 Score: 122.865 bits (307), Expect = 4.409e-30 Identity = 51/78 (65.38%), Postives = 69/78 (88.46%), Query Frame = 0
Query: 17 SPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNE 94
+P L+++ + + WQ E+SN+DYLMALNT++GRS+NDLSQYPVFPW+LS+YTS S+DLD+P++YRDLSKP+GALNE
Sbjct: 329 NPKILIKKTDIVKRWQYNELSNFDYLMALNTLAGRSYNDLSQYPVFPWILSDYTSESIDLDNPESYRDLSKPVGALNE 406
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|1175876375|ref|XP_020591870.1| (BEACH domain-containing protein C1-like, partial [Phalaenopsis equestris]) HSP 1 Score: 114.775 bits (286), Expect = 4.896e-30 Identity = 49/76 (64.47%), Postives = 65/76 (85.53%), Query Frame = 0
Query: 18 PDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
PD L +R Q+ + W R EISN++YLM LNTM+GRS+ND++QYPVFPW+L++Y+S +LDL DP +YRDLSKP+GALN
Sbjct: 53 PDQLFKRSQLMEKWARWEISNFEYLMELNTMAGRSYNDITQYPVFPWILADYSSKTLDLSDPSSYRDLSKPVGALN 128 The following BLAST results are available for this feature:
BLAST of EWM22298.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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