EWM22298.1, cds8375 (CDS) Nannochloropsis gaditana

Overview
NameEWM22298.1
Unique Namecds8375
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:580483..580626 -
Alignment locationKK037248.1:580197..580334 -
Alignment locationKK037248.1:579908..579979 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22298.1
ProductBEACH domain containing protein
Orig transcript idgnl|cribi|Naga_102028g1.5883.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:580483..580626 -
KK037248.1supercontigKK037248.1:580197..580334 -
KK037248.1supercontigKK037248.1:579908..579979 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR000409BEACH_dom
Homology
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|585102782|gb|EWM22298.1| (BEACH domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 240.35 bits (612), Expect = 1.782e-80
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
Query:    1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNEIPSYRSSCTGAITRRPPESSCTT 117
            MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNEIPSYRSSCTGAITRRPPESSCTT
Sbjct:    1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNEIPSYRSSCTGAITRRPPESSCTT 117          
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|971512924|dbj|GAQ85273.1| (WD-40 repeat family protein [Klebsormidium nitens])

HSP 1 Score: 127.872 bits (320), Expect = 7.936e-32
Identity = 57/76 (75.00%), Postives = 66/76 (86.84%), Query Frame = 0
Query:   18 PDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
            PD LLRR  + + W RREISN+DYLM LNT++GRSFNDL+QYPVFPWVL++YTS  LDLDDPK YRDLSKP+GALN
Sbjct: 2336 PDRLLRRSGLMEKWARREISNFDYLMHLNTLAGRSFNDLTQYPVFPWVLADYTSKVLDLDDPKVYRDLSKPVGALN 2411          
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|961496303|emb|CDS27071.2| (neurobeachin [Hymenolepis microstoma])

HSP 1 Score: 117.857 bits (294), Expect = 2.564e-31
Identity = 52/68 (76.47%), Postives = 62/68 (91.18%), Query Frame = 0
Query:   26 QVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
            Q TQ WQRRE+SN+DYLM LNT++GRSFNDL+QYP+FPWVLSNYTS  LDL++P NYRDLSKP+GAL+
Sbjct:   47 QATQRWQRREMSNFDYLMCLNTLAGRSFNDLNQYPIFPWVLSNYTSKHLDLNEPANYRDLSKPVGALS 114          
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|303279763|ref|XP_003059174.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226459010|gb|EEH56306.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 124.405 bits (311), Expect = 9.712e-31
Identity = 52/77 (67.53%), Postives = 67/77 (87.01%), Query Frame = 0
Query:   18 PDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNE 94
            P+ L R+  +TQ W RREISN+DYLMALNTMSGR++ND++QYPVFPWV+++Y S +LD +DPK +RDLSKP+GALNE
Sbjct:   43 PEALFRKSNLTQRWCRREISNFDYLMALNTMSGRTYNDITQYPVFPWVIADYESETLDFNDPKTFRDLSKPVGALNE 119          
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|197260814|gb|ACH56907.1| (kinase A-anchor protein neurobeachin, partial [Simulium vittatum])

HSP 1 Score: 118.242 bits (295), Expect = 1.072e-30
Identity = 54/83 (65.06%), Postives = 67/83 (80.72%), Query Frame = 0
Query:   11 RQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
            R+    SP  L+R   +TQ WQRREISN++YLM LNT++GR++NDL+QYPVFPWVL+NY S+ LDL  P NYRDLSKP+GALN
Sbjct:   81 RRASMMSPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYDSTELDLSQPSNYRDLSKPIGALN 163          
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|673041135|ref|XP_008874528.1| (hypothetical protein H310_10062 [Aphanomyces invadans] >gi|574469737|gb|ETV96750.1| hypothetical protein H310_10062 [Aphanomyces invadans])

HSP 1 Score: 124.02 bits (310), Expect = 1.623e-30
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0
Query:    1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
            +  + PR   +Q PR SP  ++    +T+AWQ R +SNYDYLMALNT+SGRSFNDL+QYPVFPWVLSNYTS  LDL DP NYR L++PMGALN
Sbjct: 1359 ILAMCPRTTIKQWPRMSPGRIVG--NLTKAWQMRVMSNYDYLMALNTVSGRSFNDLTQYPVFPWVLSNYTSDHLDLADPANYRPLNQPMGALN 1449          
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|673041133|ref|XP_008874527.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574469738|gb|ETV96751.1| hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 124.02 bits (310), Expect = 1.785e-30
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0
Query:    1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
            +  + PR   +Q PR SP  ++    +T+AWQ R +SNYDYLMALNT+SGRSFNDL+QYPVFPWVLSNYTS  LDL DP NYR L++PMGALN
Sbjct: 1359 ILAMCPRTTIKQWPRMSPGRIVG--NLTKAWQMRVMSNYDYLMALNTVSGRSFNDLTQYPVFPWVLSNYTSDHLDLADPANYRPLNQPMGALN 1449          
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|673041137|ref|XP_008874529.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|673041139|ref|XP_008874530.1| hypothetical protein, variant 3 [Aphanomyces invadans] >gi|574469739|gb|ETV96752.1| hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574469740|gb|ETV96753.1| hypothetical protein, variant 3 [Aphanomyces invadans])

HSP 1 Score: 123.635 bits (309), Expect = 2.104e-30
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0
Query:    1 MFPLLPRLAWRQPPRTSPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
            +  + PR   +Q PR SP  ++    +T+AWQ R +SNYDYLMALNT+SGRSFNDL+QYPVFPWVLSNYTS  LDL DP NYR L++PMGALN
Sbjct: 1359 ILAMCPRTTIKQWPRMSPGRIVG--NLTKAWQMRVMSNYDYLMALNTVSGRSFNDLTQYPVFPWVLSNYTSDHLDLADPANYRPLNQPMGALN 1449          
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|1134547467|gb|OMH84569.1| (Neurobeachin-like protein 2 [Zancudomyces culisetae])

HSP 1 Score: 122.865 bits (307), Expect = 4.409e-30
Identity = 51/78 (65.38%), Postives = 69/78 (88.46%), Query Frame = 0
Query:   17 SPDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALNE 94
            +P  L+++  + + WQ  E+SN+DYLMALNT++GRS+NDLSQYPVFPW+LS+YTS S+DLD+P++YRDLSKP+GALNE
Sbjct:  329 NPKILIKKTDIVKRWQYNELSNFDYLMALNTLAGRSYNDLSQYPVFPWILSDYTSESIDLDNPESYRDLSKPVGALNE 406          
BLAST of EWM22298.1 vs. NCBI_GenBank
Match: gi|1175876375|ref|XP_020591870.1| (BEACH domain-containing protein C1-like, partial [Phalaenopsis equestris])

HSP 1 Score: 114.775 bits (286), Expect = 4.896e-30
Identity = 49/76 (64.47%), Postives = 65/76 (85.53%), Query Frame = 0
Query:   18 PDFLLRRHQVTQAWQRREISNYDYLMALNTMSGRSFNDLSQYPVFPWVLSNYTSSSLDLDDPKNYRDLSKPMGALN 93
            PD L +R Q+ + W R EISN++YLM LNTM+GRS+ND++QYPVFPW+L++Y+S +LDL DP +YRDLSKP+GALN
Sbjct:   53 PDQLFKRSQLMEKWARWEISNFEYLMELNTMAGRSYNDITQYPVFPWILADYSSKTLDLSDPSSYRDLSKPVGALN 128          
The following BLAST results are available for this feature:
BLAST of EWM22298.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102782|gb|EWM22298.1|1.782e-80100.00BEACH domain containing protein [Nannochloropsis g... [more]
gi|971512924|dbj|GAQ85273.1|7.936e-3275.00WD-40 repeat family protein [Klebsormidium nitens][more]
gi|961496303|emb|CDS27071.2|2.564e-3176.47neurobeachin [Hymenolepis microstoma][more]
gi|303279763|ref|XP_003059174.1|9.712e-3167.53predicted protein [Micromonas pusilla CCMP1545] >g... [more]
gi|197260814|gb|ACH56907.1|1.072e-3065.06kinase A-anchor protein neurobeachin, partial [Sim... [more]
gi|673041135|ref|XP_008874528.1|1.623e-3064.52hypothetical protein H310_10062 [Aphanomyces invad... [more]
gi|673041133|ref|XP_008874527.1|1.785e-3064.52hypothetical protein, variant 1 [Aphanomyces invad... [more]
gi|673041137|ref|XP_008874529.1|2.104e-3064.52hypothetical protein, variant 2 [Aphanomyces invad... [more]
gi|1134547467|gb|OMH84569.1|4.409e-3065.38Neurobeachin-like protein 2 [Zancudomyces culiseta... [more]
gi|1175876375|ref|XP_020591870.1|4.896e-3064.47BEACH domain-containing protein C1-like, partial [... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8402rna8402Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications