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Properties
| Property Name | Value |
|---|
| Product | coatomer subunit gamma |
| Orig transcript id | gnl|cribi|Naga_100785g1.3341.mrna |
| Orig protein id | gnl|cribi|Naga_100785g1.3341 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:568478..569969 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8396 ID=rna8396|Name=rna8396|organism=Nannochloropsis gaditana|type=mRNA|length=325bp
CTCACCAGCGCGAGACCTGGGTCCTGCCATCACCGTCCTCCAGCTCTTTC
TGGCCTCCCCTCGTCCGGCCTTCCGTTTCTGTGCCATGCGTACTCTCTCG
GAAGTCGCCTTGACGTATCCCGTGGTGGTGACCAAGTGCAACGACGACAT
GGAGGCCCTCCTCAGCGACGCGAACCGCTCCATCGGGACGCTCGCCATCA
CCACCCTCCTTAAGACGGGGGAGGAAGGAAGTGTGGACCGGTTGATGAAG
CAGGTCTTGCAAAGTACTTCTTTTTGTTCTTCTGCTGTCCGCTGGCGGCG
CTTCTCCTTGGCTCTCTTGGATTAA back to topprotein sequence of rna8396 >rna8396-protein ID=rna8396-protein|Name=rna8396|organism=Nannochloropsis gaditana|type=polypeptide|length=184bp
MPDHSSSSLMLGPGMAPPRLEGSATDGSLTVSNVMKEIQVLKDKFKNDDE
DHFSPYQDLEKASVLQECRVFHDANIVTQDPRLCCQLITKLLHILSQGEQ
LTSVETTTVFFGVTKLFQSHNSNLRRMMYLFIKEMAEACNPDDVIIVTSS
LTKDMNSREDLYRANAIRVLSKIIDSTMLGAIER back to topmRNA from alignment at KK037248.1:568478..569969- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8396 ID=rna8396|Name=rna8396|organism=Nannochloropsis gaditana|type=mRNA|length=1492bp|location=Sequence derived from alignment at KK037248.1:568478..569969- (Nannochloropsis gaditana)
TATAGTTAATGCCCGACCACAGCAGCTCCAGCCTGATGCTGGGCCCAGGA
ATGGCACCACCCCGCCTCGAAGGGAGTGCCACGGATGGGTCCTTGACCGT
CTCGAACGTGATGAAGGAGATTCAGGTCTTGAAAGACAAGTTCAAGAACG
ACGACGAGGACCATTGTAAGTAGCCGTGAAGCATCCTTCATCGAGTCATG
TCATAGGAAAGCTACGAAAGAAAGTGAAAGGGCGGATGGAAGGTGGCCCC
AGTGCACGGTACCGATCACTGAGGCCAGACGAACAGTGGGAATTCGTGCG
GGAGACGCCTGACATACGGGTTACGACCGGGGGTCCTCGTCATACCAGGC
CTCTTTGTGTATGTGCGCCTGCTTGTCATGCAACCTCGTTATCGATTTTC
TAGCGATACCGGGGGCGCTCGGGTTTCCTTTCATGCGAGTGTCTGGCCTC
CGCCTTTTTAATCCTCCCACTTCCCTTTCTTCCCCCTTCTCCCTCCGGCC
CTGCCCGCAGTTTCCCCTTATCAAGATTTGGAGAAGGCGAGCGTGCTCCA
GGAATGCCGCGTCTTCCACGACGCCAACATCGTCACCCAGGATCCCCGCC
TTTGTTGCCAGCTCATCACCAAGCTGCTGCATATCCTCAGTCAGGTGAGC
GCGGGGGGAGGAGAGGGGCCAGGGGAGGTCGAGGGAGGAGGGTTGGATTG
AAGGGAGGGAAGGCTGCGTGCTTCCCTGTAGGTGGTAGCCTGCGACAGGC
ACATGGATGACAGGCGTCAGGGCCGATGAAGCGCGAGAGGTATGGGTTGA
ACGCCTTCCCCTTCTTTCCTCCTTCACTCCCTCCCTCCCTCCCTCCCTCT
CCCGCCCAGGGCGAGCAACTCACCTCGGTGGAAACTACGACGGTGTTCTT
CGGCGTGACGAAGCTTTTCCAGTCCCACAACTCCAACCTCCGACGGATGA
TGTACTTGTTTATCAAAGAGATGGCCGAGGCCTGTAACCCGGATGACGTC
ATCATCGTCACCTCCTCCCTCACCAAGGTATTATCGGCGAAGCAAGAAGG
AAGAAGTCAAAGAGGGGGAAGCGTGGAGGGGAAATAAATGCTTTCTTGCC
TGTGACGTGACGGCAGGGAGGAAGGGCGGTGGCAAGCGCCTACGTCCTTC
CTGGGTCCCGGAGGGAGAGTGAGGCCTTTTCCATCACATCCTCGCCGAGA
AGGATGACGCGGGAGTTCTCTTCCCCCTTTGGCGCTGCAGGGTTGACGAC
TTTGGTTGATTTGAGGAAGGAGGAGGATGATGGAACAGGCCCTTCCCGTC
ATTGACGTCGTCCGTGGGAGGCAGCGGCTCTGACCTCATTCCTTTCCTTT
CCCTTTTCTTCCCTTCATATATACATATATCACCTCGTTATGTATAGGAT
ATGAACTCCCGTGAGGACTTATACCGGGCCAATGCCATTCGTGTCTTGAG
CAAGATCATTGACTCGACCATGCTCGGCGCCATCGAACGGTA back to topCoding sequence (CDS) from alignment at KK037248.1:568478..569969- >rna8396 ID=rna8396|Name=rna8396|organism=Nannochloropsis gaditana|type=CDS|length=2216bp|location=Sequence derived from alignment at KK037248.1:568478..569969- (Nannochloropsis gaditana)
GATATGAACTCCCGTGAGGACTTATACCGGGCCAATGCCATTCGTGTCTT
GAGCAAGATCATTGACTCGACCATGCTCGGCGCCATCGAACGGTAGGCGA
GCAACTCACCTCGGTGGAAACTACGACGGTGTTCTTCGGCGTGACGAAGC
TTTTCCAGTCCCACAACTCCAACCTCCGACGGATGATGTACTTGTTTATC
AAAGAGATGGCCGAGGCCTGTAACCCGGATGACGTCATCATCGTCACCTC
CTCCCTCACCAAGTTTCCCCTTATCAAGATTTGGAGAAGGCGAGCGTGCT
CCAGGAATGCCGCGTCTTCCACGACGCCAACATCGTCACCCAGGATCCCC
GCCTTTGTTGCCAGCTCATCACCAAGCTGCTGCATATCCTCAGTCAGATG
CCCGACCACAGCAGCTCCAGCCTGATGCTGGGCCCAGGAATGGCACCACC
CCGCCTCGAAGGGAGTGCCACGGATGGGTCCTTGACCGTCTCGAACGTGA
TGAAGGAGATTCAGGTCTTGAAAGACAAGTTCAAGAACGACGACGAGGAC
CATTGATATGAACTCCCGTGAGGACTTATACCGGGCCAATGCCATTCGTG
TCTTGAGCAAGATCATTGACTCGACCATGCTCGGCGCCATCGAACGGTAG
GCGAGCAACTCACCTCGGTGGAAACTACGACGGTGTTCTTCGGCGTGACG
AAGCTTTTCCAGTCCCACAACTCCAACCTCCGACGGATGATGTACTTGTT
TATCAAAGAGATGGCCGAGGCCTGTAACCCGGATGACGTCATCATCGTCA
CCTCCTCCCTCACCAAGTTTCCCCTTATCAAGATTTGGAGAAGGCGAGCG
TGCTCCAGGAATGCCGCGTCTTCCACGACGCCAACATCGTCACCCAGGAT
CCCCGCCTTTGTTGCCAGCTCATCACCAAGCTGCTGCATATCCTCAGTCA
GATGCCCGACCACAGCAGCTCCAGCCTGATGCTGGGCCCAGGAATGGCAC
CACCCCGCCTCGAAGGGAGTGCCACGGATGGGTCCTTGACCGTCTCGAAC
GTGATGAAGGAGATTCAGGTCTTGAAAGACAAGTTCAAGAACGACGACGA
GGACCATTGATATGAACTCCCGTGAGGACTTATACCGGGCCAATGCCATT
CGTGTCTTGAGCAAGATCATTGACTCGACCATGCTCGGCGCCATCGAACG
GTAGGCGAGCAACTCACCTCGGTGGAAACTACGACGGTGTTCTTCGGCGT
GACGAAGCTTTTCCAGTCCCACAACTCCAACCTCCGACGGATGATGTACT
TGTTTATCAAAGAGATGGCCGAGGCCTGTAACCCGGATGACGTCATCATC
GTCACCTCCTCCCTCACCAAGTTTCCCCTTATCAAGATTTGGAGAAGGCG
AGCGTGCTCCAGGAATGCCGCGTCTTCCACGACGCCAACATCGTCACCCA
GGATCCCCGCCTTTGTTGCCAGCTCATCACCAAGCTGCTGCATATCCTCA
GTCAGATGCCCGACCACAGCAGCTCCAGCCTGATGCTGGGCCCAGGAATG
GCACCACCCCGCCTCGAAGGGAGTGCCACGGATGGGTCCTTGACCGTCTC
GAACGTGATGAAGGAGATTCAGGTCTTGAAAGACAAGTTCAAGAACGACG
ACGAGGACCATTGATATGAACTCCCGTGAGGACTTATACCGGGCCAATGC
CATTCGTGTCTTGAGCAAGATCATTGACTCGACCATGCTCGGCGCCATCG
AACGGTAGGCGAGCAACTCACCTCGGTGGAAACTACGACGGTGTTCTTCG
GCGTGACGAAGCTTTTCCAGTCCCACAACTCCAACCTCCGACGGATGATG
TACTTGTTTATCAAAGAGATGGCCGAGGCCTGTAACCCGGATGACGTCAT
CATCGTCACCTCCTCCCTCACCAAGTTTCCCCTTATCAAGATTTGGAGAA
GGCGAGCGTGCTCCAGGAATGCCGCGTCTTCCACGACGCCAACATCGTCA
CCCAGGATCCCCGCCTTTGTTGCCAGCTCATCACCAAGCTGCTGCATATC
CTCAGTCAGATGCCCGACCACAGCAGCTCCAGCCTGATGCTGGGCCCAGG
AATGGCACCACCCCGCCTCGAAGGGAGTGCCACGGATGGGTCCTTGACCG
TCTCGAACGTGATGAAGGAGATTCAGGTCTTGAAAGACAAGTTCAAGAAC
GACGACGAGGACCATT back to top
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