rna8384, rna8384 (mRNA) Nannochloropsis gaditana

Overview
Namerna8384
Unique Namerna8384
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1215
Alignment locationKK037248.1:539018..540756 -

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Properties
Property NameValue
Productbacterioferritin comigratory protein
Orig transcript idgnl|cribi|Naga_100118g22.2744.mrna
Orig protein idgnl|cribi|Naga_100118g22.2744
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:539018..540756 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100118g22gene8124Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8384rna8384-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22317.1cds8357Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8384 ID=rna8384|Name=rna8384|organism=Nannochloropsis gaditana|type=mRNA|length=1215bp
ATGATACGGCCATTTTCTGTATTTCATGCGTTAAGATAGTCAGATTAGTG
GCTATTCTAAATCAGAAGCTAACTGAAAAGACAGTCGTCGCCGGCGATGT
GTCGACGCCAACAGTAGCGCAGTAGCATTCCATGATCAACAACCACACCA
TTACCATGTCCATACCCTAAGTCTTTAGTCTGCAAGCGGGCTTTTGCATG
CCCATTCATCTAATTTATAGTCGACACCCAGTCCGGGGCAGCGGGCTTTG
TAAATTTTTCCTGCTCGTCGCTACCCTCATTTCCGGCACCACCGCTGGTT
TTCCTTTCTGTTGCTGGTCTTCAAAATCCCTAATCCTGATGGCCGCCGCC
ACCCCGACTGCGGGAAGTAATGAGGGATTACGTGATATCGGCGGTACATG
TGTCGTAAGCAAGAATGACCAATCCGATCCCCGCGAGACAGTCGCATCCG
CGTCACAGCCGCCATGGGTCCACGCGCTGAACAATGCACTTGAGGCAAAT
AAAGCCGATATGCACTCTCGCTTTGTGCAACTGGCTACCATAGCTCACTT
CTCGTTTGCAAAGCAAGAGACTACGGATGTCAGTGAGAATATATCGCCAC
AAGGCCTTCTTCGCCCTCGTGTCCGCTGGGTCGTCTTCAGGGGTTTCTTA
AACGAGAATACCACCACCTTCAAGGTGATCACGGACAGTCGGAGCGAAAA
GATCAAGGAGATCCTTCAAAATCCTTACGGGGAGATATCTTGGTACTTCA
TTCAAACACGGGAGCAATTTCGTCTTGCAGGGAGGTGCCAACTCGTGACG
GCGGACGAGTTGGATCCGGTGCTGGCCGTAGCGCGTCATGACCAATGGGC
CGCGCTCTCTGACAACGCGCGAAAGCAATTTTCTTGGCCTGCCCCTGGGC
TGAACCAGGACTCCGATGGCATCAGTGAGGACACCAGGAAGGCGTTATAC
AACCCTCCTCCGGTGCCTGGCACCTCCCCGCCGCCTGAAACCTTTGTGTT
GCTTTTATTCCATCCTTTCAGTGTCGATCACTTGCAGCTGCGCCCGAACC
CTCAAGTGCGAACCGTGCACGAGACAGTTCAGTGGAGCATCAACAAGCAA
CCAGACGGTATAGAAATTCGTGGGGAGGGTGTGGACGAGTCGGACGCGTG
GGCGGCCCGGAGAGTCAACCCATGACTATACCTTCACAACGAAAGCTCCT
CGATATCGCCCTGTC
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protein sequence of rna8384

>rna8384-protein ID=rna8384-protein|Name=rna8384|organism=Nannochloropsis gaditana|type=polypeptide|length=291bp
MRACAEEGCYMAVPLFDSHALCSPSGQIHYVAPTSMKLSSMFTLPATSLL
LTVLVGAPCLSHAYIRPLHMSQSQPQQSMSQPAASSPSTSSATSPTFLAG
IDRRNLLTKGFLGGAAAAFTGTFTLTTGAQKAGADVPAEGIEAPDFSLPS
SLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNA
QIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRF
SNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQA
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mRNA from alignment at KK037248.1:539018..540756-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8384 ID=rna8384|Name=rna8384|organism=Nannochloropsis gaditana|type=mRNA|length=1739bp|location=Sequence derived from alignment at KK037248.1:539018..540756- (Nannochloropsis gaditana)
ACTACAACGGATGTAACAAACATGCGTGCGTGTGCAGAGGAGGGTTGTTA
CATGGCCGTCCCCCTTTTTGATTCTCATGCTCTTTGTTCCCCCTCCGGCC
AGATCCACTACGTGGCTCCGACATCCATGAAGCTGTCCAGCATGTTCACC
CTGCCTGCTACCTCCTTGCTTCTCACTGTCCTCGTGGGAGCGCCCTGCCT
TTCGCACGCCTACATCCGGCCTTTGCACATGTCCCAAAGCCAGCCCCAGC
AGTCGATGTCCCAGCCGGCGGCGTCCTCCCCTTCCACCTCCTCCGCGACC
TCCCCTACCTTTCTTGCTGGCATTGACCGTCGTAACCTATTGACCAAAGG
CTTTCTGGGGGGTGCCGCGGCTGCTTTCACTGGCACATTTACGTTGACCA
CGGGAGCCCAAAAGGCTGGCGCAGACGTACCTGCGGAAGGGATTGAGGCA
CCTGATTTTTCCCTTCCCTCTAGCTTGGGGAAGCCTTTGTCTTTGGCAGA
TTTGACGAAAGGCGGCAAATACACTGTGCTTTACTTCTTCCCTCAGGTCT
TCACAAGCTCCTGCACACTGGAGGCGAAGGCGTTTCAGCGCGACATTGAC
AACTACAAGAAATTGAACGCCCAGATCGTGGGTGTCTCGGTGGACGAATC
GGACAAACAAACAGATTTTAAATCCGAGTGCGGCCTGGACTTTATTCGTA
CGTACCAGAATCTGAAATAAAGGGATGGGAGGAGGTGGGAGAGATGAGGT
GCCGGGGAGAGGAGGTCGACCAGGAGTAGGAGATCAAAAGTTTAGGTAGG
ACCTTCGCCCGGTGAGAGGAACTGTCAAGGGGACGCGTGTATGCAAATGG
ACGTAGCTTGCCATGGAAAAGGGATGGGAACGCTCATCATGCTACCCATT
GAAGAACACGTTTCTCCTCCTCTTTCTCCTCCCTGTACGACAGTGCTCAG
TGACAAGGGCGCCAAGGTCTCGGAGGCCTACGGGTCCGCGCTGGACATTC
CTTTCTTGGGCCGCTTCTCGAACCGCCAGACGTACATCATCTCTCCGGTA
CGTGGATAGTCGGACGTGTCCATGCGTCGTGTGCTGTGTCCGGTGCTGCC
GTGTCAGGGAGAGGGGTTGGGGAGGATTAGATGGAATCGTTAATGGATCC
GACGTAGCACTATCGAAACCGCGTTTCCACCTGCTCTGTACGCCGCACGC
TGGTTACCTGAGTGGAAATTTGTAGCGTGCACCTACTGAAGGCGGCTCCT
ATCTCAATGCACCTCCATCAGGATGGGAAGCTGGTCAAAGTCTTCACAAA
CGTGGAGTCGAAGGTGAAGAAGCATTCTGAAGAGGTCTTGGAGGCCTTGA
AGGCACTGCAAGCTTGAGGACCTGCCACTATAGAATTCTCTTTTGAGGGA
TGTACGGCCGTGGGTCGTGCCATCAGGGGACTTCAAGCTGGAAAGCCGCC
ACTGGAAGGAAGGGATGTGGTGGGAATGGGGGAGGGGTAAATCGGACAAG
GATGGTCTTATGGTTTGAAATCCTGGCCGGAATCGTGTGGAAGGGCAATG
ACCCGATCCAATGTGTGCTCAGTGGTTTCTAGAATTACTACGTGATGATT
TTTTCCCCCTGCATTCGATTTAGAGACACCTGGGTATGAAAACGCAAGAG
GTGGACCTGGATGTATACGTATCTATTTTCCTATCAACAAAGGGCGTGGA
TGTGGGAAAGAAACAACTACAACCTCCTGAAGCGAACAG
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Coding sequence (CDS) from alignment at KK037248.1:539018..540756-

>rna8384 ID=rna8384|Name=rna8384|organism=Nannochloropsis gaditana|type=CDS|length=2628bp|location=Sequence derived from alignment at KK037248.1:539018..540756- (Nannochloropsis gaditana)
GATGGGAAGCTGGTCAAAGTCTTCACAAACGTGGAGTCGAAGGTGAAGAA
GCATTCTGAAGAGGTCTTGGAGGCCTTGAAGGCACTGCAAGCTTGATGCT
CAGTGACAAGGGCGCCAAGGTCTCGGAGGCCTACGGGTCCGCGCTGGACA
TTCCTTTCTTGGGCCGCTTCTCGAACCGCCAGACGTACATCATCTCTCCG
ATGCGTGCGTGTGCAGAGGAGGGTTGTTACATGGCCGTCCCCCTTTTTGA
TTCTCATGCTCTTTGTTCCCCCTCCGGCCAGATCCACTACGTGGCTCCGA
CATCCATGAAGCTGTCCAGCATGTTCACCCTGCCTGCTACCTCCTTGCTT
CTCACTGTCCTCGTGGGAGCGCCCTGCCTTTCGCACGCCTACATCCGGCC
TTTGCACATGTCCCAAAGCCAGCCCCAGCAGTCGATGTCCCAGCCGGCGG
CGTCCTCCCCTTCCACCTCCTCCGCGACCTCCCCTACCTTTCTTGCTGGC
ATTGACCGTCGTAACCTATTGACCAAAGGCTTTCTGGGGGGTGCCGCGGC
TGCTTTCACTGGCACATTTACGTTGACCACGGGAGCCCAAAAGGCTGGCG
CAGACGTACCTGCGGAAGGGATTGAGGCACCTGATTTTTCCCTTCCCTCT
AGCTTGGGGAAGCCTTTGTCTTTGGCAGATTTGACGAAAGGCGGCAAATA
CACTGTGCTTTACTTCTTCCCTCAGGTCTTCACAAGCTCCTGCACACTGG
AGGCGAAGGCGTTTCAGCGCGACATTGACAACTACAAGAAATTGAACGCC
CAGATCGTGGGTGTCTCGGTGGACGAATCGGACAAACAAACAGATTTTAA
ATCCGAGTGCGGCCTGGACTTTATTCGATGGGAAGCTGGTCAAAGTCTTC
ACAAACGTGGAGTCGAAGGTGAAGAAGCATTCTGAAGAGGTCTTGGAGGC
CTTGAAGGCACTGCAAGCTTGATGCTCAGTGACAAGGGCGCCAAGGTCTC
GGAGGCCTACGGGTCCGCGCTGGACATTCCTTTCTTGGGCCGCTTCTCGA
ACCGCCAGACGTACATCATCTCTCCGATGCGTGCGTGTGCAGAGGAGGGT
TGTTACATGGCCGTCCCCCTTTTTGATTCTCATGCTCTTTGTTCCCCCTC
CGGCCAGATCCACTACGTGGCTCCGACATCCATGAAGCTGTCCAGCATGT
TCACCCTGCCTGCTACCTCCTTGCTTCTCACTGTCCTCGTGGGAGCGCCC
TGCCTTTCGCACGCCTACATCCGGCCTTTGCACATGTCCCAAAGCCAGCC
CCAGCAGTCGATGTCCCAGCCGGCGGCGTCCTCCCCTTCCACCTCCTCCG
CGACCTCCCCTACCTTTCTTGCTGGCATTGACCGTCGTAACCTATTGACC
AAAGGCTTTCTGGGGGGTGCCGCGGCTGCTTTCACTGGCACATTTACGTT
GACCACGGGAGCCCAAAAGGCTGGCGCAGACGTACCTGCGGAAGGGATTG
AGGCACCTGATTTTTCCCTTCCCTCTAGCTTGGGGAAGCCTTTGTCTTTG
GCAGATTTGACGAAAGGCGGCAAATACACTGTGCTTTACTTCTTCCCTCA
GGTCTTCACAAGCTCCTGCACACTGGAGGCGAAGGCGTTTCAGCGCGACA
TTGACAACTACAAGAAATTGAACGCCCAGATCGTGGGTGTCTCGGTGGAC
GAATCGGACAAACAAACAGATTTTAAATCCGAGTGCGGCCTGGACTTTAT
TCGATGGGAAGCTGGTCAAAGTCTTCACAAACGTGGAGTCGAAGGTGAAG
AAGCATTCTGAAGAGGTCTTGGAGGCCTTGAAGGCACTGCAAGCTTGATG
CTCAGTGACAAGGGCGCCAAGGTCTCGGAGGCCTACGGGTCCGCGCTGGA
CATTCCTTTCTTGGGCCGCTTCTCGAACCGCCAGACGTACATCATCTCTC
CGATGCGTGCGTGTGCAGAGGAGGGTTGTTACATGGCCGTCCCCCTTTTT
GATTCTCATGCTCTTTGTTCCCCCTCCGGCCAGATCCACTACGTGGCTCC
GACATCCATGAAGCTGTCCAGCATGTTCACCCTGCCTGCTACCTCCTTGC
TTCTCACTGTCCTCGTGGGAGCGCCCTGCCTTTCGCACGCCTACATCCGG
CCTTTGCACATGTCCCAAAGCCAGCCCCAGCAGTCGATGTCCCAGCCGGC
GGCGTCCTCCCCTTCCACCTCCTCCGCGACCTCCCCTACCTTTCTTGCTG
GCATTGACCGTCGTAACCTATTGACCAAAGGCTTTCTGGGGGGTGCCGCG
GCTGCTTTCACTGGCACATTTACGTTGACCACGGGAGCCCAAAAGGCTGG
CGCAGACGTACCTGCGGAAGGGATTGAGGCACCTGATTTTTCCCTTCCCT
CTAGCTTGGGGAAGCCTTTGTCTTTGGCAGATTTGACGAAAGGCGGCAAA
TACACTGTGCTTTACTTCTTCCCTCAGGTCTTCACAAGCTCCTGCACACT
GGAGGCGAAGGCGTTTCAGCGCGACATTGACAACTACAAGAAATTGAACG
CCCAGATCGTGGGTGTCTCGGTGGACGAATCGGACAAACAAACAGATTTT
AAATCCGAGTGCGGCCTGGACTTTATTC
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Synonyms
Publications