EWM22317.1, cds8357 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|585102814|gb|EWM22317.1| (bacterioferritin comigratory protein [Nannochloropsis gaditana]) HSP 1 Score: 593.578 bits (1529), Expect = 0.000e+0 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0 Query: 1 MRACAEEGCYMAVPLFDSHALCSPSGQIHYVAPTSMKLSSMFTLPATSLLLTVLVGAPCLSHAYIRPLHMSQSQPQQSMSQPAASSPSTSSATSPTFLAGIDRRNLLTKGFLGGAAAAFTGTFTLTTGAQKAGADVPAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQA 291 MRACAEEGCYMAVPLFDSHALCSPSGQIHYVAPTSMKLSSMFTLPATSLLLTVLVGAPCLSHAYIRPLHMSQSQPQQSMSQPAASSPSTSSATSPTFLAGIDRRNLLTKGFLGGAAAAFTGTFTLTTGAQKAGADVPAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQA Sbjct: 1 MRACAEEGCYMAVPLFDSHALCSPSGQIHYVAPTSMKLSSMFTLPATSLLLTVLVGAPCLSHAYIRPLHMSQSQPQQSMSQPAASSPSTSSATSPTFLAGIDRRNLLTKGFLGGAAAAFTGTFTLTTGAQKAGADVPAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQA 291
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|219119839|ref|XP_002180671.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408144|gb|EEC48079.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 187.193 bits (474), Expect = 2.588e-55 Identity = 101/191 (52.88%), Postives = 123/191 (64.40%), Query Frame = 0 Query: 101 IDRRNLLTKGFLGGAAAAFTGTFTLTTGAQKAGADVPAEGIEAPDFSLPSSLGK-PLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQ 290 +DRR + L AA A TG +T A VP G +AP F LP+S G SL +L GK+TVLYF+P F+ CTLEA+ FQRDI+ Y+ LNAQIVGVSVD +K F S GLDF +LSD G +VS YGSAL +P G FSNRQTYII P+G L VFT+VES++ +HS EVLE L L+ Sbjct: 23 LDRRAFVRDVALTTAAVA-TG---VTVSAPLPAFAVPVTGAKAPFFELPNSRGSGSTSLKNLINSGKWTVLYFYPGAFSKGCTLEARGFQRDIERYRALNAQIVGVSVDPVEKNAQFCSAEGLDFYMLSDTGGRVSNLYGSALSVPGFGMFSNRQTYIIDPEGNLRWVFTDVESRIARHSVEVLEKLNELE 209
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|223994741|ref|XP_002287054.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220978369|gb|EED96695.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 184.496 bits (467), Expect = 5.293e-54 Identity = 103/212 (48.58%), Postives = 131/212 (61.79%), Query Frame = 0 Query: 85 SSPSTSSATSPTFLAGIDRRNLLTKGFLGGAAAAFTGTFT-----LTTGAQKAGADVPAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQA 291 S PS S T P I+ R + F+ A + TGT T L + A + + G AP F+LP+S G+ ++L L+ GK+TVLYFFP FTS CTLEA+ FQ D+D Y LN+QIVGVSVD DK + F E LDF +L+D+G +S+AYGS+L IP G FSNRQTYII P + VF +VES + +HS EVLE LK LQA Sbjct: 26 SLPSKSPLTQPKI--SINSR----RAFINHATSIATGTITTSALFLPRLSNAASSSPLSLGSPAPSFTLPNSKGQQVTLDSLSSSGKWTVLYFFPGAFTSGCTLEARKFQEDVDKYHALNSQIVGVSVDSVDKNSAFCREEKLDFFMLTDEGGSISKAYGSSLSIPGFGTFSNRQTYIIDPQQNVRWVFVDVESHIPRHSAEVLEKLKELQA 231
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|299470900|emb|CBN79884.1| (Peroxiredoxin family protein [Ectocarpus siliculosus]) HSP 1 Score: 180.644 bits (457), Expect = 1.054e-52 Identity = 89/150 (59.33%), Postives = 109/150 (72.67%), Query Frame = 0 Query: 140 GIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKAL 289 G APDF+LPS+ GK +SL DL K K+TVLYF+P FTS CT+EA+ FQ+D + Y NAQIVGVSVD +K +F+ L F LLSD GA V++ YGS LDIPF+G+F+NR T+II DGK+ KVFT+VESKV KHS EVL L L Sbjct: 69 GSMAPDFTLPSNAGKDISLKDLLKQAKHTVLYFYPGDFTSGCTIEAQGFQKDFEKYGANNAQIVGVSVDSIEKHLNFEKSYNLQFPLLSDIGANVADLYGSKLDIPFMGKFANRLTFIIGSDGKIEKVFTDVESKVAKHSAEVLATLATL 218
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|551657164|ref|XP_005831354.1| (peroxiredoxin [Guillardia theta CCMP2712] >gi|428175484|gb|EKX44374.1| peroxiredoxin [Guillardia theta CCMP2712]) HSP 1 Score: 176.407 bits (446), Expect = 1.028e-50 Identity = 98/202 (48.51%), Postives = 129/202 (63.86%), Query Frame = 0 Query: 98 LAGIDRRNLLTKGFLGGAAAAFTGTFTLTTGAQKAGADVP---AEGIE-----APDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQA 291 ++G+ RR+ +A G +T G G +VP AEG+ APDF LPS+ GK + L DL GK+TVLYF+P FTS CT+EA F++ + + L A+IVGVSVD +K DF + GL F LLSD+G KVS+ YGSAL IPF+G FSNRQTYII P G L VFT+V+S++ KH++EV+ LK L+A Sbjct: 50 ISGLSRRDFFKD------TSAMAGVSAITIGT--LGFEVPSSFAEGLPSVNAPAPDFLLPSNEGKDIGLKDLK--GKWTVLYFYPGDFTSGCTIEANNFEKASADIRALGAEIVGVSVDSVEKHLDFAKKYGLSFPLLSDQGGKVSQLYGSALQIPFMGSFSNRQTYIIDPSGNLRWVFTDVQSRLNKHADEVIAKLKELKA 241
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|1130427873|ref|WP_075596620.1| (peroxiredoxin [Oscillatoriales cyanobacterium 'hensonii'] >gi|1129074563|gb|OLP20296.1| peroxiredoxin [Oscillatoriales cyanobacterium 'hensonii']) HSP 1 Score: 144.436 bits (363), Expect = 4.172e-39 Identity = 88/189 (46.56%), Postives = 114/189 (60.32%), Query Frame = 0 Query: 103 RRNLLTKGFLGGAAAAFTGTFTLTTGAQKAGADVPAEGIEAPDFSLPSSLGK-PLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQ 290 RR+ L FL +A F + T A G +P G AP F+LPSS G +SLAD GK+ VLYF+P+ FTS CTLEA+ FQ+D+ Y + N QI+GVS D D T+F GL F LLSD+G KVS+AYGS +LG S R +++I P+G L + FT V + HS+EVL L+ALQ Sbjct: 4 RRDFLR--FLLISALVFFSVISFTAPALALGGKLPEIGQPAPAFTLPSSTGDGSISLADYR--GKWVVLYFYPKDFTSGCTLEARRFQQDLPKYLEKNTQIIGVSADSVDSHTEFCDSEGLKFPLLSDRGGKVSQAYGS-----WLGIVSLRHSFLIDPEGILQERFTGVNPAI--HSQEVLARLEALQ 181
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|1084664181|gb|OGP12280.1| (peroxiredoxin [Deltaproteobacteria bacterium GWA2_47_9]) HSP 1 Score: 142.124 bits (357), Expect = 3.021e-38 Identity = 83/171 (48.54%), Postives = 107/171 (62.57%), Query Frame = 0 Query: 120 TGTFTLTTGAQKAGADVPAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQ 290 G L++ A A++P G APDFSL S+ +SL D GK+ VLYF+P+ FT CT+EA FQRD+ Y+K+NA IVGVSVD + F ++ GL F LLSD K+S AYGS + + S R T+II+P G++ KVFT V KV+KHSEEVL AL LQ Sbjct: 12 VGVLGLSSVLAIAFAELPEAGKPAPDFSLKSNENTQVSLKDYR--GKWVVLYFYPKDFTPGCTIEAHNFQRDLAAYEKVNAVIVGVSVDTPELHKSFCAKEGLSFKLLSDIDGKISTAYGSVTEYKG-NKLSARNTFIINPQGRIAKVFTGV--KVEKHSEEVLAALAELQ 177
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|505033303|ref|WP_015220405.1| (peroxiredoxin [Cyanobacterium aponinum] >gi|428685215|gb|AFZ54682.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Cyanobacterium aponinum PCC 10605]) HSP 1 Score: 141.739 bits (356), Expect = 6.533e-38 Identity = 87/187 (46.52%), Postives = 109/187 (58.29%), Query Frame = 0 Query: 104 RNLLTKGFLGGAAAAFTGTFTLTTGAQKAGADVPAEGIEAPDFSLPSSLGK-PLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKAL 289 RN+L F+ F +F A G P+ APDF+LP++LG +SL D GK+ VLYF+PQ FT CTLEAK FQ+D+ Y LNA+IVGVSVD+ + +F E GL F LL+D KVS+AYGS L GR S R TYII+P+G LV F V + HS+EVL L L Sbjct: 7 RNILVFSFI------FIASFNFMPSAMALGGIQPSLNESAPDFTLPTNLGDGEVSLHDYR--GKWVVLYFYPQDFTPGCTLEAKRFQQDLQKYHDLNAEIVGVSVDDVNSHQNFCDEEGLKFPLLADTEGKVSKAYGSWLS----GR-SLRHTYIINPEGILVAKFLGVRPAI--HSQEVLSELNKL 178
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|1175275996|ref|WP_081823791.1| (peroxiredoxin [Acidobacterium ailaaui]) HSP 1 Score: 136.732 bits (343), Expect = 1.999e-36 Identity = 74/156 (47.44%), Postives = 99/156 (63.46%), Query Frame = 0 Query: 136 VPAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQA 291 +P G +APDF+LPS G+P+SL GK+ VLYF+P+ TS CT+EA FQRD + + K NA I+GVSVD D F ++ GL+F LLSD KV YGS + + +NR T++I P GK+VKV+T V+ HSEEVL AL ++A Sbjct: 1 MPQVGQQAPDFTLPSQEGRPVSLDSFR--GKWVVLYFYPKDMTSGCTIEAHNFQRDQEKFLKANAVILGVSVDSVDSHKQFCAKDGLNFTLLSDADKKVVAEYGSLGNYAGF-KIANRNTFLIDPQGKIVKVWTKVDP--SHHSEEVLSALNQMEA 151
BLAST of EWM22317.1 vs. NCBI_GenBank
Match: gi|499455914|ref|WP_011143378.1| (peroxiredoxin [Gloeobacter violaceus] >gi|37522958|ref|NP_926335.1| bacterioferritin comigratory protein [Gloeobacter violaceus PCC 7421] >gi|35213960|dbj|BAC91330.1| bacterioferritin comigratory protein [Gloeobacter violaceus PCC 7421]) HSP 1 Score: 137.502 bits (345), Expect = 2.044e-36 Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 0 Query: 128 GAQKAGADVPAEGIEAPDFSLPSSLGKPLSLADLTKGGKYTVLYFFPQVFTSSCTLEAKAFQRDIDNYKKLNAQIVGVSVDESDKQTDFKSECGLDFILLSDKGAKVSEAYGSALDIPFLGRFSNRQTYIISPDGKLVKVFTNVESKVKKHSEEVLEALKALQA 291 G Q A P G AP F LP + GK +SL D GK+ VLYF+P+ TS CT+EA+ FQ+D+ YK+L A+IVGVS D D + F + GL F+L SD G KV++AY S + +G + R TY+I P G++ KVF+NV+ HS EVL LK +QA Sbjct: 18 GPQAALLAAPRVGEAAPAFELPVAAGKKISLKDFQ--GKWLVLYFYPKDMTSGCTIEAQRFQKDLAQYKQLGAEIVGVSADALDSHSMFSKKEGLTFLLASDVGGKVAQAYDSWYGLGDMG-MAARNTYLIDPQGRVAKVFSNVDP--TGHSREVLSTLKQIQA 176 The following BLAST results are available for this feature:
BLAST of EWM22317.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|