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Properties
| Property Name | Value |
|---|
| Product | pyridoxamine 5 -phosphate oxidase- fmn-binding protein |
| Orig transcript id | gnl|cribi|Naga_100118g20.2749.mrna |
| Orig protein id | gnl|cribi|Naga_100118g20.2749 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:536235..537571 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8383 ID=rna8383|Name=rna8383|organism=Nannochloropsis gaditana|type=mRNA|length=744bp
ATGGCCGTATCATCCTCCGCCAGAGTAGACTCACGGAGTACGGACGGCCT
TGTTCTTTTGTCTCAAGGTGCTGAGGCCCGAGTTTTCGAGTTACCCTCTT
TTTTGGGAGGTCGCCCCGCTATAGTCAAAGAGCGATTTGCCAAGTCTTAC
CGCCTTCCTGTCTTGGACGCGAAACTGACAAAACAGCGCACTGTGGGAGA
GGTGCGATGTATGTTACGGTGCGCGAAGGTAGGGGTACACGCTCCCTGTG
TCTATATGGTCGACATGCAAGCATCCAGAATTTACATGGAGAGAATAGAA
GGCCGCTCCTTTAAGGCATTTTTACGCGACCACTTTAATGATGCAACGCG
TTCGTATACGCCCGCAGCACACGAATTGGCCGATGAGCTTGGAAAAGTGG
TAGCAAGAATTCACGATGCCGAGATGGTACACGGGGATTTGACCACATCA
AATGTTATGGTCATGGGCGAGGAAGACGGAAAAAGCAAGGCACAAGACGT
AAGTCATCGGCTCGTGGTGATTGATTTCGGCCTAGGTTTTTTGCAACCCC
TGCCTGAAGACAAAGCTGTTGACCTCTACGTACTCGAACGGGCATTTCTT
TCAACGCATCCCAATTCTGAGGAATTGGTAGATCGTGCAATGGCTGCCTA
CGCGAGACACTCATCGAGCCATCAGTCGAAGGCAGTTTTGAAAAAATTAG
AGGACGTTCGTCGGCGAGGTCGAAAACGTGATATGTTTGGTTGA back to topprotein sequence of rna8383 >rna8383-protein ID=rna8383-protein|Name=rna8383|organism=Nannochloropsis gaditana|type=polypeptide|length=325bp
MPIHLIYSRHPVRGSGLCKFFLLVATLISGTTAGFPFCCWSSKSLILMAA
ATPTAGSNEGLRDIGGTCVVSKNDQSDPRETVASASQPPWVHALNNALEA
NKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGF
LNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLV
TADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKAL
YNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINK
QPDGIEIRGEGVDESDAWAARRVNP back to topmRNA from alignment at KK037248.1:536235..537571+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8383 ID=rna8383|Name=rna8383|organism=Nannochloropsis gaditana|type=mRNA|length=1337bp|location=Sequence derived from alignment at KK037248.1:536235..537571+ (Nannochloropsis gaditana)
ATGATACGGCCATTTTCTGTATTTCATGCGTTAAGATAGTCAGATTAGTG
GCTATTCTAAATCAGAAGCTAACTGAAAAGACAGTCGTCGCCGGCGATGT
GTCGACGCCAACAGTAGCGCAGTAGCATTCCATGATCAACAACCACACCA
TTACCATGTCCATACCCTAAGTCTTTAGTCTGCAAGCGGGCTTTTGCATG
CCCATTCATCTAATTTATAGTCGACACCCAGTCCGGGGCAGGTAAAtcct
ttaacctcccccccacgcgATCGCTTCCCAATGCCTTGTTTTGGCCCGTC
GCAAGCACGTGAACGGCATGGAGAACTAATTGAGATTTTAAATGTGTACC
TCCCATCTTACAGCGGGCTTTGTAAATTTTTCCTGCTCGTCGCTACCCTC
ATTTCCGGCACCACCGCTGGTTTTCCTTTCTGTTGCTGGTCTTCAAAATC
CCTAATCCtgatggccgccgccaccccgaCTGCGGGAAGTAATGAGGGAT
TACGTGATATCGGCGGTACATGTGTCGTAAGCAAGAATGACCAATCCGAT
CCCCGCGAGACAGTCGCATCCGCGTCACAGCCGCCATGGGTCCACGCGCT
GAACAATGCACTTGAGGCAAATAAAGCCGATATGCACTCTCGCTTTGTGC
AACTGGCTACCATAGCTCACTTCTCGTTTGCAAAGCAAGAGACTACGGAT
GTCAGTGAGAATATATCGCCAcaaggccttcttcgccctcgtGTCCGCTG
GGTCGTCTTCAGGGGTTTCTTAAACGAGAATACCACCACCTTCAAGGTGA
TCACGGACAGTCGGAGCGAAAAGATCAAGGAGATCCTTCAAAATCCTTAC
GGGGAGATATCTTGGTACTTCATTCAAACACGGGAGCAATTTCGTCTTGC
AGGGAGGTGCCAACTCGTGACGGCGGACGAGTTGGATCCGGTGCTGGCCG
TAGCGCGTCATGACCAATGGGCCGCGCTCTCTGACAACGCGCGAAAGCAA
TTTTCTTGGCCTGCCCCTGGGCTGAACCAGGACTCCGATGGCATCAGTGA
GGACACCAGGAAGGCGTTATACAACCCTCCTCCGGTGCCTGgcacctccc
cgccgcctgaAACCTTTGTGTTGCTTTTATTCCATCCTTTCAGTGTCGAT
CACTTGCAGCTGCGCCCGAACCCTCAAGTGCGAACCGTGCACGAGACAGT
TCAGTGGAGCATCAACAAGCAACCAGACGGTATAGAAATTCGTGGGGAGG
GTGTGGACGAGTCGGACGCGTGGGCGGCCCGGAGAGTCAACCCATGACTA
TACCTTCACAACGAAAGCTCCTCGATATCGCCCTGTC back to topCoding sequence (CDS) from alignment at KK037248.1:536235..537571+ >rna8383 ID=rna8383|Name=rna8383|organism=Nannochloropsis gaditana|type=CDS|length=1956bp|location=Sequence derived from alignment at KK037248.1:536235..537571+ (Nannochloropsis gaditana)
ATGCCCATTCATCTAATTTATAGTCGACACCCAGTCCGGGGCAGCGGGCT
TTGTAAATTTTTCCTGCTCGTCGCTACCCTCATTTCCGGCACCACCGCTG
GTTTTCCTTTCTGTTGCTGGTCTTCAAAATCCCTAATCCtgatggccgcc
gccaccccgaCTGCGGGAAGTAATGAGGGATTACGTGATATCGGCGGTAC
ATGTGTCGTAAGCAAGAATGACCAATCCGATCCCCGCGAGACAGTCGCAT
CCGCGTCACAGCCGCCATGGGTCCACGCGCTGAACAATGCACTTGAGGCA
AATAAAGCCGATATGCACTCTCGCTTTGTGCAACTGGCTACCATAGCTCA
CTTCTCGTTTGCAAAGCAAGAGACTACGGATGTCAGTGAGAATATATCGC
CAcaaggccttcttcgccctcgtGTCCGCTGGGTCGTCTTCAGGGGTTTC
TTAAACGAGAATACCACCACCTTCAAGGTGATCACGGACAGTCGGAGCGA
AAAGATCAAGGAGATCCTTCAAAATCCTTACGGGGAGATATCTTGGTACT
TCATTCAAACACGGGAGCAATTTCGTCTTGCAGGGAGGTGCCAACTCGTG
ACGGCGGACGAGTTGGATCCGGTGCTGGCCGTAGCGCGTCATGACCAATG
GGCCGCGCTCTCTGACAACGCGCGAAAGCAATTTTCTTGGCCTGCCCCTG
GGCTGAACCAGGACTCCGATGGCATCAGTGAGGACACCAGGAAGGCGTTA
TACAACCCTCCTCCGGTGCCTGgcacctccccgccgcctgaAACCTTTGT
GTTGCTTTTATTCCATCCTTTCAGTGTCGATCACTTGCAGCTGCGCCCGA
ACCCTCAAGTGCGAACCGTGCACGAGACAGTTCAGTGGAGCATCAACAAG
CAACCAGACGGTATAGAAATTCGTGGGGAGGGTGTGGACGAGTCGGACGC
GTGGGCGGCCCGGAGAGTCAACCCATGAATGCCCATTCATCTAATTTATA
GTCGACACCCAGTCCGGGGCAGCGGGCTTTGTAAATTTTTCCTGCTCGTC
GCTACCCTCATTTCCGGCACCACCGCTGGTTTTCCTTTCTGTTGCTGGTC
TTCAAAATCCCTAATCCtgatggccgccgccaccccgaCTGCGGGAAGTA
ATGAGGGATTACGTGATATCGGCGGTACATGTGTCGTAAGCAAGAATGAC
CAATCCGATCCCCGCGAGACAGTCGCATCCGCGTCACAGCCGCCATGGGT
CCACGCGCTGAACAATGCACTTGAGGCAAATAAAGCCGATATGCACTCTC
GCTTTGTGCAACTGGCTACCATAGCTCACTTCTCGTTTGCAAAGCAAGAG
ACTACGGATGTCAGTGAGAATATATCGCCAcaaggccttcttcgccctcg
tGTCCGCTGGGTCGTCTTCAGGGGTTTCTTAAACGAGAATACCACCACCT
TCAAGGTGATCACGGACAGTCGGAGCGAAAAGATCAAGGAGATCCTTCAA
AATCCTTACGGGGAGATATCTTGGTACTTCATTCAAACACGGGAGCAATT
TCGTCTTGCAGGGAGGTGCCAACTCGTGACGGCGGACGAGTTGGATCCGG
TGCTGGCCGTAGCGCGTCATGACCAATGGGCCGCGCTCTCTGACAACGCG
CGAAAGCAATTTTCTTGGCCTGCCCCTGGGCTGAACCAGGACTCCGATGG
CATCAGTGAGGACACCAGGAAGGCGTTATACAACCCTCCTCCGGTGCCTG
gcacctccccgccgcctgaAACCTTTGTGTTGCTTTTATTCCATCCTTTC
AGTGTCGATCACTTGCAGCTGCGCCCGAACCCTCAAGTGCGAACCGTGCA
CGAGACAGTTCAGTGGAGCATCAACAAGCAACCAGACGGTATAGAAATTC
GTGGGGAGGGTGTGGACGAGTCGGACGCGTGGGCGGCCCGGAGAGTCAAC
CCATGA back to top
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