EWM22322.1, cds8356 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|585102819|gb|EWM22322.1| (pyridoxamine 5 -phosphate oxidase- fmn-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0
Query: 1 MPIHLIYSRHPVRGSGLCKFFLLVATLISGTTAGFPFCCWSSKSLILMAAATPTAGSNEGLRDIGGTCVVSKNDQSDPRETVASASQPPWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINKQPDGIEIRGEGVDESDAWAARRVNP 325
MPIHLIYSRHPVRGSGLCKFFLLVATLISGTTAGFPFCCWSSKSLILMAAATPTAGSNEGLRDIGGTCVVSKNDQSDPRETVASASQPPWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINKQPDGIEIRGEGVDESDAWAARRVNP
Sbjct: 1 MPIHLIYSRHPVRGSGLCKFFLLVATLISGTTAGFPFCCWSSKSLILMAAATPTAGSNEGLRDIGGTCVVSKNDQSDPRETVASASQPPWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINKQPDGIEIRGEGVDESDAWAARRVNP 325
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|585113295|gb|EWM30619.1| (pyridoxamine 5 -phosphate oxidase- fmn-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 164.466 bits (415), Expect = 7.271e-45 Identity = 122/346 (35.26%), Postives = 168/346 (48.55%), Query Frame = 0
Query: 1 MPIHLIYSRHPVRGSG-------LCKFFLLVATLISGT-TAGF---PFCCWSSKSLILMAAATPTAGSNEGLRDIGG--TCVVSKNDQSDPRETVASASQPPWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLN----ENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPG----LNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINKQPDGIEIRGEGVDESDAWAARRVNP 325
MP+H + R+P+ S LC +L AT ++ F PF + S SL MA GL DIG + + ++ D +P WV L ++ N D HSR++QLAT+ F +++ +++P VR VVFRGF N ++ K+ITD+RSEKI ++ +P EI+WYF++TREQ+RL GR ++VT D L AR QW LS++AR QF WP P L+QD S D PP + S PPETF LLL VDHL L+ +PQ RTVH +G+ E W +VNP
Sbjct: 1 MPVHFL--RNPLLCSVSHTATTLLCALPVLRATFVAPVRNIAFLHSPFNRFPS-SLTPMATMKAAEIGEGGLADIGQARSSSPTASNADDASHGARGEKKPKWVLDLGISMARNNRDAHSRYIQLATVG---FGSDDSS----------VIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDI------PPTL--ASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHA-------------RRKGQKEGEEGDWEVTKVNP 309
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|1210166280|dbj|BAY85361.1| (pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Calothrix parasitica NIES-267]) HSP 1 Score: 157.918 bits (398), Expect = 9.191e-44 Identity = 96/237 (40.51%), Postives = 121/237 (51.05%), Query Frame = 0
Query: 89 PWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINKQPDGIEIRGEGVDESDAWAARRVNP 325
PW L NAL+ N++ HSR+ QLAT+ + + T P R VVFRGFL E+T FK+ITD+RSEKI EI +GEI WYF +REQFR+AG ++ + D L R W LSDNAR QF+WP P G S D ++A P P + P + F LLLF P VDHL+LR PQ RT++E DE W + VNP
Sbjct: 5 PWRSFLANALKKNRSQAHSRYFQLATV------RNDGT-------------PANRTVVFRGFL-EDTNKFKIITDTRSEKITEIQNRSWGEICWYFTNSREQFRIAGNIIIIDVNYQDSELQTVRESTWQDLSDNARIQFAWPHP-------GASRDNQEAF--SPQQPDENKPLDNFCLLLFEPVKVDHLRLRGEPQNRTIYER-------------------DEMGVWDVKEVNP 193
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|550277730|ref|WP_022604232.1| (FMN-dependent protein [Rubidibacter lacunae] >gi|549083654|gb|ERN42883.1| PPOX class probable FMN-dependent enzyme, alr4036 family [Rubidibacter lacunae KORDI 51-2]) HSP 1 Score: 156.377 bits (394), Expect = 4.727e-43 Identity = 92/213 (43.19%), Postives = 122/213 (57.28%), Query Frame = 0
Query: 89 PWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVH---ETVQWSI 298
PW + AL N++D H+RF QLAT+ P G RP R VVFRGF NT T +V+TD+RSEK+ +I + P+GE+ WYF +TREQFR+AGR + V+AD D L R ++W LSD+AR QF WP P ++DSD R A + P T P TF LLL P +VD L+LR +PQ RT+ + +WS+
Sbjct: 5 PWRSPIARALHRNRSDAHARFFQLATVM-----------------PDG--RPANRTVVFRGFF-PNTDTLEVVTDARSEKVAQIDRQPWGEVCWYFTKTREQFRIAGRLKFVSADATDADLQRERQERWYDLSDSARLQFIWPQPKASRDSD------RNAFFVKAPAANTK-PASTFNLLLVEPVAVDWLELRGDPQNRTLFLQTDDGKWSV 190
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|935607260|ref|WP_054469137.1| (pyridoxamine 5'-phosphate oxidase [Planktothricoides sp. SR001] >gi|923468737|gb|KOR34745.1| pyridoxamine 5'-phosphate oxidase [Planktothricoides sp. SR001]) HSP 1 Score: 152.525 bits (384), Expect = 1.305e-41 Identity = 96/215 (44.65%), Postives = 120/215 (55.81%), Query Frame = 0
Query: 89 PWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGL-NQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQ--WSINK 300
PW L A N++ ++R+VQLAT+ P G RP R VVFRGFL++ T K +TD RSEK +I + P+ E+ WYF +TREQFRL GR LVT LDPVLAVAR WA LSD AR QF+WP PG ++ DG +NPPP P F LLL P SVDHL+LR +PQ R +++ WSI +
Sbjct: 6 PWRSPLGRAQHRNRSLPNARYVQLATV-----------------RPNG--RPANRTVVFRGFLDQ-TNQLKFVTDFRSEKPDQIDRCPWAEVCWYFPKTREQFRLQGRLTLVTDTHLDPVLAVAREKAWAELSDAARSQFAWPHPGHPRENGDG---------FNPPPT-AADRPLSHFCLLLLDPLSVDHLELRGDPQNRRLYQRQNDGWSIQE 190
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|504947538|ref|WP_015134640.1| (pyridoxamine 5'-phosphate oxidase-like FMN-binding protein [Leptolyngbya sp. PCC 7376] >gi|427356162|gb|AFY38885.1| pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Leptolyngbya sp. PCC 7376]) HSP 1 Score: 150.984 bits (380), Expect = 4.864e-41 Identity = 85/206 (41.26%), Postives = 119/206 (57.77%), Query Frame = 0
Query: 89 PWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGL--NQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHE 292
PW L+ AL N++ MH RF QLAT+ +P+GL P R VVFRGF+ E T K+ITD RS+KI+ + + EI+WYF +TREQFRLAG ++V AD+L+ R W +SD+AR QF+WP+P N +SD + +T + P ++FVLL+F P +VDHL+LR NPQ R +++
Sbjct: 9 PWRSPLSRALHRNRSQMHCRFFQLATV-----------------TPEGL--PTNRTVVFRGFV-EQTNYLKIITDRRSQKIEHLASHNQAEIAWYFTKTREQFRLAGTIEMVNADDLESDFFQERQQTWETISDSARSQFAWPSPTAQRNINSDDFNVET----------SSSKSPLDSFVLLIFQPHTVDHLELRGNPQNRFIYK 184
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|516350456|ref|WP_017740489.1| (hypothetical protein [Scytonema hofmannii] >gi|1004813747|gb|KYC39709.1| pyridoxamine 5'-phosphate oxidase [Scytonema hofmannii PCC 7110]) HSP 1 Score: 150.599 bits (379), Expect = 7.627e-41 Identity = 90/213 (42.25%), Postives = 116/213 (54.46%), Query Frame = 0
Query: 89 PWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVH---ETVQWSI 298
PW L AL N++D HSR+ QLAT+ Q RP R VVFRGFL E+T K+ITD+RS+K +I +GE WYF TREQFR AG LV A+ DP + AR W +SDNAR QF+WPAPG ++ S + ++P P P ++ P F LLL P VDHL+LR +PQ R + E+ WS+
Sbjct: 6 PWRSPLARALHRNRSDSHSRYFQLATV-------------------QADGRPANRTVVFRGFL-EDTNYLKIITDTRSQKFNQIKDRAWGEACWYFTNTREQFRFAGELVLVDANHPDPKMQKARQIAWQEISDNARLQFAWPAPGESRSS--------QEAFSPSP-PDSTLPLSNFCLLLLDPVQVDHLELRGDPQNRWCYLQDESQTWSV 189
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|501599217|ref|WP_012598973.1| (pyridoxamine 5'-phosphate oxidase [Cyanothece sp. PCC 7424] >gi|218171296|gb|ACK70029.1| pyridoxamine 5'-phosphate oxidase-related, FMN-binding [Cyanothece sp. PCC 7424]) HSP 1 Score: 150.599 bits (379), Expect = 8.421e-41 Identity = 97/244 (39.75%), Postives = 125/244 (51.23%), Query Frame = 0
Query: 82 VASASQPPWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINKQPDGIEIRGEGVDESDAWAARRVNP 325
+ S S PW AL+ AL N++ +SR+ QLATI +P+G P+ R VVFRG+L +NT K++TD RSEK+ +I P+GEI WYF +TREQFRL+GR L+T + D L R W LSD+AR QF+WP PG + D A P P P E F LLL P VDHL+LR NPQ R + +DES W A+ +NP
Sbjct: 1 MMSDSLAPWRVALSRALHLNRSQPYSRYFQLATI-----------------TPEGF--PKNRTVVFRGYL-DNTNQIKIVTDLRSEKVNQINYQPWGEICWYFTKTREQFRLSGRLTLITPNYPDSTLQKERQLAWQQLSDSARLQFTWPEPGQLRIEDN------SAFSAASPAP--EHPLEHFCLLLLDPEKVDHLELRGNPQNRCQY-------------------YLDESKNWIAQSINP 197
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|1100944525|ref|WP_071453949.1| (pyridoxamine 5'-phosphate oxidase [Gloeomargarita lithophora] >gi|1100592769|gb|APB33355.1| pyridoxamine 5'-phosphate oxidase-like protein [Gloeomargarita lithophora Alchichica-D10]) HSP 1 Score: 147.517 bits (371), Expect = 9.115e-40 Identity = 87/237 (36.71%), Postives = 119/237 (50.21%), Query Frame = 0
Query: 89 PWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINKQPDGIEIRGEGVDESDAWAARRVNP 325
PW L AL N++ HSR+ QLAT+ PQG P R +VFRGF +T T + ITD RSEK+ +I QNP+GE+ WYF TREQFRLAG Q++ + AR +W +LSD +R+QF+WP PG + D ++ VP + PP++F LL HP VDHL+LR PQ R ++ D++ W + +NP
Sbjct: 5 PWRTPLARALHRNRSLPHSRYAQLATV-----------------DPQGC--PHNRSIVFRGF-PADTNTLEFITDQRSEKVSQIYQNPWGELCWYFPHTREQFRLAGELQIIDNSSTESPTQTARQHRWQSLSDTSRQQFTWPHPGHPRTGDLTTD-----------VPDPTTPPDSFCLLWLHPQRVDHLELRGTPQNRYCYQQ-------------------DKNQTWTVQEINP 191
BLAST of EWM22322.1 vs. NCBI_GenBank
Match: gi|1121299297|ref|WP_073611121.1| (pyridoxamine 5'-phosphate oxidase [Phormidium tenue] >gi|1115280303|gb|OKH43527.1| pyridoxamine 5'-phosphate oxidase [Phormidium tenue NIES-30]) HSP 1 Score: 147.902 bits (372), Expect = 9.935e-40 Identity = 91/214 (42.52%), Postives = 116/214 (54.21%), Query Frame = 0
Query: 89 PWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLNENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPPPVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHET---VQWSIN 299
PW AL AL N++ +SR+ QLAT+ RP R VVFRG+L N+ T +ITD RS K+ +I+ +P+ E WYF TREQFRLAG Q+VTA E DP L AR + W ALSDNAR+QF WP P T +A ++P + T PP F L+L P VDHL+LR PQ RT+++ W IN
Sbjct: 16 PWRSALARALHRNRSRPYSRYFQLATVTSSG-------------------RPANRTVVFRGWL-PNSNTLTLITDQRSAKVADIVAHPWAEACWYFTDTREQFRLAGSIQVVTA-EADPALLQARQNSWEALSDNARQQFYWPHPA--------QPRTAEADFSPKEIQAT--PPAEFCLVLLEPDQVDHLELRGEPQNRTLYDQQPGSTWQIN 198 The following BLAST results are available for this feature:
BLAST of EWM22322.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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