rna8381, rna8381 (mRNA) Nannochloropsis gaditana

Overview
Namerna8381
Unique Namerna8381
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length423
Alignment locationKK037248.1:533062..534770 -

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Properties
Property NameValue
ProductZinc finger, C2H2
Orig transcript idgnl|cribi|Naga_100118g18.2755.mrna
Orig protein idgnl|cribi|Naga_100118g18.2755
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:533062..534770 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100118g18gene8121Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8381rna8381-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22328.1cds8354Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8381 ID=rna8381|Name=rna8381|organism=Nannochloropsis gaditana|type=mRNA|length=423bp
ATGCTAGGCGCTACGGGAGCCGCAAAGATAGGCTGGGCACGCAGAGATTG
CACCGCGATCGAGGACACCGAGGCCACGCCAGTGACCGTACATTCCAATT
CAGCAACACAGTTGAGCGGGTTCACGTCTATCAATGTCGCAATTTTTCCT
CCGGATAGCCAACTACATAGCGAACGAGCTCATCGTCAAAGGTCTTGCCA
ACAACCGAGCATTCCAACGGTTCGCACTTCGCACGGCGGACCACGTGGAC
AAAGTGAAAGCCACAGGCGTGGAACATTCGGGGAAGCTGGCCAAAGAGGC
GGAGAAGCACGTGGGGTTGATAGGACGCTTCATGGGGGCCCTGCAAAAAG
AGGTCGAAAAGGACATCAGGAAGTTTTCCAGGAAATGATAAGGCAGGGGG
GTGAACATCACGAGAAAGAATAA
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protein sequence of rna8381

>rna8381-protein ID=rna8381-protein|Name=rna8381|organism=Nannochloropsis gaditana|type=polypeptide|length=126bp
MEENSLDNFETNRGVERSAADSSSSDSSSSSDSSSSSDSSSSSDSSSSSR
DSSSSSSSSRSRRKSSSSSSSSSSSSRNRASERKKPYQCDRCEASFGIAP
DLSEHFHRLHGVTKHPSQIVPTAVIF
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mRNA from alignment at KK037248.1:533062..534770-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8381 ID=rna8381|Name=rna8381|organism=Nannochloropsis gaditana|type=mRNA|length=1709bp|location=Sequence derived from alignment at KK037248.1:533062..534770- (Nannochloropsis gaditana)
ATGGAAGAGAATAGCCTGGATAACTTTGAAACAAACCGTGGGGTGGAGAG
GTCTGCAGCAGACAGTAGCAGTAGCGACAGCAGCAGCAGTAGCGACAGCA
GCAGCAGTAGCGACAGCAGCAGCAGTAGCGACAGCAGCAGCAGCAGTAGG
GACAGCAGCAGTAGCAGCAGCAGCAGCAGAAGCAGGAGGAAAAGTAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGTAGAAGTAGCAGGAGGAGGAGGA
GGAGGAGGCACAGTATTGGTCGCAGCCGGAGTAGCAGCAGCAGCAGTCGG
AGGAGGAGGAGGAAGAGAGGCAGAGGAAGTCGATTGCCTCCTCGCCGCGA
AGGGAAGAGGCATGGTAGGGTTTGCTCTCCGAAGGGGTACGAGGACAGAG
GGCGAGACAGGGAGAGGACTTGGGAGAGGACGAGCAAGAGGTCATTGAAG
GAGGGGAGACGAAGCCGGAGCGTGGATGGAGGAAGAGGGGTGTCAAAGTA
CGGGAGGGCAGAGAAGAGAAAGGACCACAGCCGGAGTCGGAGCAGAGAGA
GGACTGAGAGGCAAGATAGAGGACATCGAAGGGAGGGAAGGGAGCGAAGT
AGTCGAGGGAGGTATGGAGGCCGGAGCCGGAGTCATAGCCTGGAGAGGGC
TGAGAGGAGGAGAGGACGAGGGAGGGAACGAGGGCGGGATGGAGGGCGGG
AGGAGGAAGGTGGCCGGGGCGCCAGAGTCCACAGGGATGCTCGCGCCCAC
CCCCGCAACGAGTCCTTCATTGCAGGCACACAGACGCGGAGACGGGCGGA
CGAGGCGGAGGGAAGGGCTGGGGAAGGTAGGAGGTACGGGCAGGAGGCGC
GTCGACGGGTCGATGGACCGTCGGGCTCGCCCTCTCGAGACTCCTCCGCC
CCCGAAGGCCGTCGCATGCCCCCCTCCCAAGCGTCAGGGCCCAGTGCCCC
TTTCTCTCCTTCCTCCTCGGCCGTGCCTCCGAAACGGTCGGGCATTTTCC
AGTACCTGCGGGAGGTTGCGGGGGTATCGTTGCCCTCTCTGGTCACGGAG
GCTGGCAAGGCGGCGAACCGGGAGAGCGGGGTCCGAGGCCACGGGGCAGG
GACGCGGATGGAGAAGGCGGGAGGGATCGGAGGGAAAAAAAGCGATGGGG
AAGGAGGAGGAGGAGGGAGGCGGCTGGAAGGAGGGGAGGAGGTGCGGGAC
GGGTACTCCCGAGGCCTGCGGGCAGACCGGGCATCGGAGAGGAAGAAGCC
CTACCAGTGCGACCGTTGTGAGGCCTCCTTTGGGATCGCCCCCGATCTGA
GCGAGCATTTTCACCGGTTGCACGGGGTTACCAAGCACCCCAGCCAGATC
GTGCCCACCGCGGTGATCTTCTAGAAGGGCGGTTCCCAAGCAGCCACCGG
ACCCGAGGCCAGGTCTTCCTCCCCACGGGCATCGCCATTTGGAAGTCCTG
TCGTGGTCCAAGCTTCTGTATCGCGCGGAGTGAAATGCCTGGGAGAGAGA
GGCATGAGAGTGGCGGGCAGGTCCAGTCTTGTGGCACGCCTGTTCGGTGT
TGAGGACACGGGAAACCGCCTAGGCCACCGGGAGAGAGGGAGAACGTCTA
GTCTGATGGGAAAGAGGGAATGTCATGAGTCTGATGGTAGAAGGGGAAAC
GTTTAGTCCGATAAACCACAGGGAAAACAACTTGCCCGACGGGAGGGACA
GCCACGCGG
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Coding sequence (CDS) from alignment at KK037248.1:533062..534770-

>rna8381 ID=rna8381|Name=rna8381|organism=Nannochloropsis gaditana|type=CDS|length=762bp|location=Sequence derived from alignment at KK037248.1:533062..534770- (Nannochloropsis gaditana)
ACCGGGCATCGGAGAGGAAGAAGCCCTACCAGTGCGACCGTTGTGAGGCC
TCCTTTGGGATCGCCCCCGATCTGAGCGAGCATTTTCACCGGTTGCACGG
GGTTACCAAGCACCCCAGCCAGATCGTGCCCACCGCGGTGATCTTCTAGA
TGGAAGAGAATAGCCTGGATAACTTTGAAACAAACCGTGGGGTGGAGAGG
TCTGCAGCAGACAGTAGCAGTAGCGACAGCAGCAGCAGTAGCGACAGCAG
CAGCAGTAGCGACAGCAGCAGCAGTAGCGACAGCAGCAGCAGCAGTAGGG
ACAGCAGCAGTAGCAGCAGCAGCAGCAGAAGCAGGAGGAAAAGTAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGTAGAAACCGGGCATCGGAGAGGAA
GAAGCCCTACCAGTGCGACCGTTGTGAGGCCTCCTTTGGGATCGCCCCCG
ATCTGAGCGAGCATTTTCACCGGTTGCACGGGGTTACCAAGCACCCCAGC
CAGATCGTGCCCACCGCGGTGATCTTCTAGATGGAAGAGAATAGCCTGGA
TAACTTTGAAACAAACCGTGGGGTGGAGAGGTCTGCAGCAGACAGTAGCA
GTAGCGACAGCAGCAGCAGTAGCGACAGCAGCAGCAGTAGCGACAGCAGC
AGCAGTAGCGACAGCAGCAGCAGCAGTAGGGACAGCAGCAGTAGCAGCAG
CAGCAGCAGAAGCAGGAGGAAAAGTAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGTAGAA
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Synonyms
Publications