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Properties
| Property Name | Value |
|---|
| Product | cdk5 regulatory subunit associated protein 3 |
| Orig transcript id | gnl|cribi|Naga_100208g5.7567.mrna |
| Orig protein id | gnl|cribi|Naga_100208g5.7567 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:441254..443455 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8349 ID=rna8349|Name=rna8349|organism=Nannochloropsis gaditana|type=mRNA|length=1427bp
TGGCTTGCTTAGCAGCTCAAGTAAGACTTATCTCCTTTGAATCATCTCTG
TGTTCCGTTTTTCCACTTGAAGCAGATTTAACCTCCCCACCCCCTTCGCT
CAGACGCGTCGCAATACGGTGGGGCACCTGCGATTGAAAAACATGTATCA
CAATCAACACTCGCAGTACCAACTTTATTTCTTGTGATTTTAGGGTGTTC
CACCTCATGCTCATCCATTTGGCGCAATTTGGCGCTTCTCGACTACCATC
TTCGGTCACCAGACAATCCATTTTCCGTCACTTCGTTGCTGCAACTGCCT
CTTGCTTCCTCCTGAGTCATTCGGCACGTGCTTTCGGCTCTCATCTTGCG
ATGTCCGCATCACCTGGCCCAATTACTATTGTGACTGGCAGTAACAAGGG
GATAGGCCTGGAAATCCTTAAAAAACTAGCCCCTACTTCTTCCGTTGCCA
TATTAGCTGCACGCAACCCCTCTTTGGGAGAACAGGCTGCACAAGAGCTG
CGTGATCATGGTCTCGAAAATGTGAAATATCGTCCTTTGGACGTTTCTTC
TGCGGAATCCATCGAACATTTTGTAAAAGAAATTCAAAAAGACTACGGAC
GGGCGGACATCCTGGTCAACAACGCAGGTATCGCATTCAAAGGTCGGGAT
CCGACCCCCTTTCGTGATCAAGCCGCACCGACGTTCAAAACCAACTTTTG
GGGCACTGTGGAACTTATAGATGCCATGACTCCGCTGCTTCGAAAGTCGA
CCGGCTGTCCTTGCATTGTGAATGTGGCCAGCCAGAGTGGCCGGTTGAGC
ATCCTGGACACGGACCGGGGGAAACAGGCAGAAATATCGTCGCCTATTTT
GACACGCGACCGTCTTTTCGAGCTTGTGCGACAATTTGAACACGACGTAA
GGACGGGGACACACGCTGAAAATGGGTGGCCGAACACGTGCTATGGAATG
AGCAAATTGGCTTTGATCGCGTTTGGCAGGGTTTTCGCGAGAAACGAAAT
GGAAGGCGGCACAGAGAAAGAGGGGAAGACGTCCATCTGGTTGGCTTCCT
GCTGCCCGGGCTGGTGCGACACGGACATGAGCAGCCACAGTGGACCTCGG
ACTGCCGAGCACGGAGCGCGGACGCCGGCATGGTTGGCGATGGAGGGAAG
ACAGCAAGGCGCTACGGCAGGGGGGTTCTTTTACGATGAAAAGGAGATTC
AGTGGTGAGCGTACGGGGCAATTCAAATTAAGAATTTAATAAACATGTAA
GACCATAGCAAGCTCGCACTATGAAACTCAAGGCGTAGAAAGGTGAGACA
AAATTGCACATGTAACAGGCATTTACACTGGCTATTTTCTTGCTATCACG
TTACTGGTTGGCGCCATGAGCTTGTACTGAGAAAGTTTCGACGCCGCCCG
TGATCACAATGCTCCTGCCGTTGTAGA back to topprotein sequence of rna8349 >rna8349-protein ID=rna8349-protein|Name=rna8349|organism=Nannochloropsis gaditana|type=polypeptide|length=616bp
MGFDMRKVKDMKRWGGGWELKKEINCMDGSFEKSTTTKGEKSKLIIAPSP
CFGVIPDVLLMDSIPFLSTKKSNSGAIPVYVPYSKLQDWLIDRKQLPRDW
TEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLE
GAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYT
CPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQT
GIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIG
KALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLED
RFSTLCQARCHRRACPREQKKQSLGAETGANDQDARRMGGGIPADESSVQ
EGEKVGMNRSGASGHCSWVAGGHSCTSSAWRTEGDNPKASPIGNPAFRKA
LTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETC
LSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRR
RETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVI
TGGVETFSVQAHGANQ back to topmRNA from alignment at KK037248.1:441254..443455- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8349 ID=rna8349|Name=rna8349|organism=Nannochloropsis gaditana|type=mRNA|length=2202bp|location=Sequence derived from alignment at KK037248.1:441254..443455- (Nannochloropsis gaditana)
ATGGGATTTGATATGAGGAAAGTAAAGGACATGAAGAGATGGGGGGGAGG
TTGGGAATTGAAAAAGGAAATTAATTGCATGGATGGATCTTTTGAAAAAT
CGACTACCACAAAGGGTGAAAAATCTAAACTAATTATTGCTCCCTCACCA
TGTTTCGGCGTAATTCCGTGTTATGACGCGCAATATTGGATACCATTTAC
GCTCGCGATAGATTGTCACCACAGCTCAACCTTTTACAACTGGCTTCAAC
GTGCTTCGCCTTGACGAGGGAAGTCAGCACAAAAAGCATCCACAAAGCGC
CAAAAATAATCTCATAATAATCTCTATAAAACATATATCACGTACTGTAC
GACAGAGACGTATTATTAATGGATTCAATTCCGTTTCTGTCCACCAAAAA
GAGTAATTCCGGGGCAATACCCGTATATGTGCCCTATTCCAAATTACAAG
GTAAGACTACGCTCGCAGCTCACAAGAAGAGTTCAGGGAACACAACAAGC
CACTGTCTAATAACAGAACTCCTTATCCTTTTTAATGGTCCAAGTTTTCG
CTATGCAAAATTGAATCTTGAAGTATATTTCTCTGAAGCCCATTCCCTTA
CCGCGTCCGTCAGACTGGCTTATAGACAGGAAACAGCTCCCACGCGACTG
GACCGAGAAGCTTAAGAACGTCAAATCTTTGCTCCAAGAAGGTCTTAGGG
AGCTCGAGACAGGCGGTGGAGAGGTGGCTGACTGGGTCAAGGGGAAGGAA
AGCAGTGCCTTGCATTTTTATACGTGCACGCAGATCATGTCTTTGCTGGA
AGGAGCTCAGCAAGGCCGCACAAAGAATATTTTTGGGTCTTATACCTCGG
CTCTTCTGAAGCTATGGGACAATATATTACGCGCCTACCGGAAGGAAAAC
GTGTACTTGGGAGAGGCGGCCCGTTTGCTGGCCACGCATACCATGTACAC
ATGCCCAAGCCTGCAACGACGTATCACCGGGTATGAAAAACAGGTGGAGG
ACTGTGAGCGTCGTCTGAACGATTATCGTCAAGCAATCAAGGAAGGAAAT
GCGCGTTACCGTGCGGCGTGCGAGGCATGGGGTCTGGATGTGGAACAGAC
GGGGATAGGAAGGGAGAGAAAAAGCTTGGCCCCCCCCCCCAATGGTGCGG
AGAAAGAAGTATGGAGGTCGCTGCTCACACGTATGGCCGAGAAAGAGCTA
CCGGAAGCCTTGACAGCGGTCGAAAGGGAGTTGTGTGCGGAATTGATAGG
AAAGGCATTGGACTACTACGATCGCTTTCGGAGATTTCTTCACACGCACG
ACGAGGACCGTACCGAAGCCAATTCAGCGGCAGACGAGCAGAAGAACGAG
GAAGGCGGGAGAAAGACATGCGTGGTGGAAGTCGAGGGGAGGTTGGAAGA
TCGATTCTCAACGCTTTGTCAAGCCCGCTGCCACCGGAGGGCATGCCCAC
GCGAGCAAAAAAAACAAAGCTTGGGCGCAGAGACCGGGGCCAATGATCAG
GATGCCCGAAGGATGGGAGGTGGCATCCCCGCAGACGAATCCTCTGTTCA
GGAAGGGGAGAAAGTGGGGATGAACAGGAGCGGAGCATCTGGGCATTGCT
CGTGGGTGGCGGGCGGCCATTCGTGCACGTCATCGGCATGGAGAACAGAA
GGAGACAATCCGAAAGCTTCCCCCATCGGGAACCCAGCCTTCCGGAAGGC
CCTGACAAACGAGCTTCTAGAACTCGAAGCTTTCTTGCAACAGCGACGTT
TGGAAGTGGGCGACGCAGACCACGTGCTCCTGGTCAGTATCCACTGCCGG
GAGGCCGTCGGGGGCCTCCTCGACAACTCCAAGGAGGCAGTAGAGACCTG
CCTGAGCCAGGTCCAAACGGCACTGGATGCAGTACAAGGAAAGCGCCTGC
AGCAGCTGCTCCTCCTCCAATCCTCCCCGGCCTACCTGGAGCGCGTTGCC
GCTTCCATGGAGCAGGCACGAAGGCGGCTTGTCAATCTCGAAGACAGACG
ACGGGAGACGGAGGCCCGCCGCAAAGACATCCTGCTCAAACTGGCACAGA
CAGTCCCGGAACGCGAGGCGACCGCGGCCGCGACCATCGCGCTGAAAAAA
AAGATGGAGGCCTCGTTGCAAGAGCTCTACAACGGCAGGAGCATTGTGAT
CACGGGCGGCGTCGAAACTTTCTCAGTACAAGCTCATGGCGCCAACCAGT
AA back to topCoding sequence (CDS) from alignment at KK037248.1:441254..443455- >rna8349 ID=rna8349|Name=rna8349|organism=Nannochloropsis gaditana|type=CDS|length=5553bp|location=Sequence derived from alignment at KK037248.1:441254..443455- (Nannochloropsis gaditana)
ACTGGCTTATAGACAGGAAACAGCTCCCACGCGACTGGACCGAGAAGCTT
AAGAACGTCAAATCTTTGCTCCAAGAAGGTCTTAGGGAGCTCGAGACAGG
CGGTGGAGAGGTGGCTGACTGGGTCAAGGGGAAGGAAAGCAGTGCCTTGC
ATTTTTATACGTGCACGCAGATCATGTCTTTGCTGGAAGGAGCTCAGCAA
GGCCGCACAAAGAATATTTTTGGGTCTTATACCTCGGCTCTTCTGAAGCT
ATGGGACAATATATTACGCGCCTACCGGAAGGAAAACGTGTACTTGGGAG
AGGCGGCCCGTTTGCTGGCCACGCATACCATGTACACATGCCCAAGCCTG
CAACGACGTATCACCGGGTATGAAAAACAGGTGGAGGACTGTGAGCGTCG
TCTGAACGATTATCGTCAAGCAATCAAGGAAGGAAATGCGCGTTACCGTG
CGGCGTGCGAGGCATGGGGTCTGGATGTGGAACAGACGGGGATAGGAAGG
GAGAGAAAAAGCTTGGCCCCCCCCCCCAATGGTGCGGAGAAAGAAGTATG
GAGGTCGCTGCTCACACGTATGGCCGAGAAAGAGCTACCGGAAGCCTTGA
CAGCGGTCGAAAGGGAGTTGTGTGCGGAATTGATAGGAAAGGCATTGGAC
TACTACGATCGCTTTCGGAGATTTCTTCACACGCACGACGAGGACCGTAC
CGAAGCCAATTCAGCGGCAGACGAGCAGAAGAACGAGGAAGGCGGGAGAA
AGACATGCGTGGTGGAAGTCGAGGGGAGGTTGGAAGATCGATTCTCAACG
CTTTGTCAAGCCCGCTGCCACCGGAGGGCATGCCCACGCGAGCAAAAAAA
ACAAAGCTTGGGCGCAGAGACCGGGGCCAATGATCAGGATGCCCGAAGGA
TGGGAGGTGGCATCCCCGCAGACGAATCCTCTGTTCAGGAAGGGGAGAAA
GTGGGGATGAACAGGAGCGGAGCATCTGGGCATTGCTCGTGGGTGGCGGG
CGGCCATTCGTGCACGTCATCGGCATGGAGAACAGAAGGAGACAATCCGA
AAGCTTCCCCCATCGGGAACCCAGCCTTCCGGAAGGCCCTGACAAACGAG
CTTCTAGAACTCGAAGCTTTCTTGCAACAGCGACGTTTGGAAGTGGGCGA
CGCAGACCACGTGCTCCTGGTCAGTATCCACTGCCGGGAGGCCGTCGGGG
GCCTCCTCGACAACTCCAAGGAGGCAGTAGAGACCTGCCTGAGCCAGGTC
CAAACGGCACTGGATGCAGTACAAGGAAAGCGCCTGCAGCAGCTGCTCCT
CCTCCAATCCTCCCCGGCCTACCTGGAGCGCGTTGCCGCTTCCATGGAGC
AGGCACGAAGGCGGCTTGTCAATCTCGAAGACAGACGACGGGAGACGGAG
GCCCGCCGCAAAGACATCCTGCTCAAACTGGCACAGACAGTCCCGGAACG
CGAGGCGACCGCGGCCGCGACCATCGCGCTGAAAAAAAAGATGGAGGCCT
CGTTGCAAGAGCTCTACAACGGCAGGAGCATTGTGATCACGGGCGGCGTC
GAAACTTTCTCAGTACAAGCTCATGGCGCCAACCAGTAAAGACGTATTAT
TAATGGATTCAATTCCGTTTCTGTCCACCAAAAAGAGTAATTCCGGGGCA
ATACCCGTATATGTGCCCTATTCCAAATTACAAGATGGGATTTGATATGA
GGAAAGTAAAGGACATGAAGAGATGGGGGGGAGGTTGGGAATTGAAAAAG
GAAATTAATTGCATGGATGGATCTTTTGAAAAATCGACTACCACAAAGGG
TGAAAAATCTAAACTAATTATTGCTCCCTCACCATGTTTCGGCGTAATTC
CACTGGCTTATAGACAGGAAACAGCTCCCACGCGACTGGACCGAGAAGCT
TAAGAACGTCAAATCTTTGCTCCAAGAAGGTCTTAGGGAGCTCGAGACAG
GCGGTGGAGAGGTGGCTGACTGGGTCAAGGGGAAGGAAAGCAGTGCCTTG
CATTTTTATACGTGCACGCAGATCATGTCTTTGCTGGAAGGAGCTCAGCA
AGGCCGCACAAAGAATATTTTTGGGTCTTATACCTCGGCTCTTCTGAAGC
TATGGGACAATATATTACGCGCCTACCGGAAGGAAAACGTGTACTTGGGA
GAGGCGGCCCGTTTGCTGGCCACGCATACCATGTACACATGCCCAAGCCT
GCAACGACGTATCACCGGGTATGAAAAACAGGTGGAGGACTGTGAGCGTC
GTCTGAACGATTATCGTCAAGCAATCAAGGAAGGAAATGCGCGTTACCGT
GCGGCGTGCGAGGCATGGGGTCTGGATGTGGAACAGACGGGGATAGGAAG
GGAGAGAAAAAGCTTGGCCCCCCCCCCCAATGGTGCGGAGAAAGAAGTAT
GGAGGTCGCTGCTCACACGTATGGCCGAGAAAGAGCTACCGGAAGCCTTG
ACAGCGGTCGAAAGGGAGTTGTGTGCGGAATTGATAGGAAAGGCATTGGA
CTACTACGATCGCTTTCGGAGATTTCTTCACACGCACGACGAGGACCGTA
CCGAAGCCAATTCAGCGGCAGACGAGCAGAAGAACGAGGAAGGCGGGAGA
AAGACATGCGTGGTGGAAGTCGAGGGGAGGTTGGAAGATCGATTCTCAAC
GCTTTGTCAAGCCCGCTGCCACCGGAGGGCATGCCCACGCGAGCAAAAAA
AACAAAGCTTGGGCGCAGAGACCGGGGCCAATGATCAGGATGCCCGAAGG
ATGGGAGGTGGCATCCCCGCAGACGAATCCTCTGTTCAGGAAGGGGAGAA
AGTGGGGATGAACAGGAGCGGAGCATCTGGGCATTGCTCGTGGGTGGCGG
GCGGCCATTCGTGCACGTCATCGGCATGGAGAACAGAAGGAGACAATCCG
AAAGCTTCCCCCATCGGGAACCCAGCCTTCCGGAAGGCCCTGACAAACGA
GCTTCTAGAACTCGAAGCTTTCTTGCAACAGCGACGTTTGGAAGTGGGCG
ACGCAGACCACGTGCTCCTGGTCAGTATCCACTGCCGGGAGGCCGTCGGG
GGCCTCCTCGACAACTCCAAGGAGGCAGTAGAGACCTGCCTGAGCCAGGT
CCAAACGGCACTGGATGCAGTACAAGGAAAGCGCCTGCAGCAGCTGCTCC
TCCTCCAATCCTCCCCGGCCTACCTGGAGCGCGTTGCCGCTTCCATGGAG
CAGGCACGAAGGCGGCTTGTCAATCTCGAAGACAGACGACGGGAGACGGA
GGCCCGCCGCAAAGACATCCTGCTCAAACTGGCACAGACAGTCCCGGAAC
GCGAGGCGACCGCGGCCGCGACCATCGCGCTGAAAAAAAAGATGGAGGCC
TCGTTGCAAGAGCTCTACAACGGCAGGAGCATTGTGATCACGGGCGGCGT
CGAAACTTTCTCAGTACAAGCTCATGGCGCCAACCAGTAAAGACGTATTA
TTAATGGATTCAATTCCGTTTCTGTCCACCAAAAAGAGTAATTCCGGGGC
AATACCCGTATATGTGCCCTATTCCAAATTACAAGATGGGATTTGATATG
AGGAAAGTAAAGGACATGAAGAGATGGGGGGGAGGTTGGGAATTGAAAAA
GGAAATTAATTGCATGGATGGATCTTTTGAAAAATCGACTACCACAAAGG
GTGAAAAATCTAAACTAATTATTGCTCCCTCACCATGTTTCGGCGTAATT
CCACTGGCTTATAGACAGGAAACAGCTCCCACGCGACTGGACCGAGAAGC
TTAAGAACGTCAAATCTTTGCTCCAAGAAGGTCTTAGGGAGCTCGAGACA
GGCGGTGGAGAGGTGGCTGACTGGGTCAAGGGGAAGGAAAGCAGTGCCTT
GCATTTTTATACGTGCACGCAGATCATGTCTTTGCTGGAAGGAGCTCAGC
AAGGCCGCACAAAGAATATTTTTGGGTCTTATACCTCGGCTCTTCTGAAG
CTATGGGACAATATATTACGCGCCTACCGGAAGGAAAACGTGTACTTGGG
AGAGGCGGCCCGTTTGCTGGCCACGCATACCATGTACACATGCCCAAGCC
TGCAACGACGTATCACCGGGTATGAAAAACAGGTGGAGGACTGTGAGCGT
CGTCTGAACGATTATCGTCAAGCAATCAAGGAAGGAAATGCGCGTTACCG
TGCGGCGTGCGAGGCATGGGGTCTGGATGTGGAACAGACGGGGATAGGAA
GGGAGAGAAAAAGCTTGGCCCCCCCCCCCAATGGTGCGGAGAAAGAAGTA
TGGAGGTCGCTGCTCACACGTATGGCCGAGAAAGAGCTACCGGAAGCCTT
GACAGCGGTCGAAAGGGAGTTGTGTGCGGAATTGATAGGAAAGGCATTGG
ACTACTACGATCGCTTTCGGAGATTTCTTCACACGCACGACGAGGACCGT
ACCGAAGCCAATTCAGCGGCAGACGAGCAGAAGAACGAGGAAGGCGGGAG
AAAGACATGCGTGGTGGAAGTCGAGGGGAGGTTGGAAGATCGATTCTCAA
CGCTTTGTCAAGCCCGCTGCCACCGGAGGGCATGCCCACGCGAGCAAAAA
AAACAAAGCTTGGGCGCAGAGACCGGGGCCAATGATCAGGATGCCCGAAG
GATGGGAGGTGGCATCCCCGCAGACGAATCCTCTGTTCAGGAAGGGGAGA
AAGTGGGGATGAACAGGAGCGGAGCATCTGGGCATTGCTCGTGGGTGGCG
GGCGGCCATTCGTGCACGTCATCGGCATGGAGAACAGAAGGAGACAATCC
GAAAGCTTCCCCCATCGGGAACCCAGCCTTCCGGAAGGCCCTGACAAACG
AGCTTCTAGAACTCGAAGCTTTCTTGCAACAGCGACGTTTGGAAGTGGGC
GACGCAGACCACGTGCTCCTGGTCAGTATCCACTGCCGGGAGGCCGTCGG
GGGCCTCCTCGACAACTCCAAGGAGGCAGTAGAGACCTGCCTGAGCCAGG
TCCAAACGGCACTGGATGCAGTACAAGGAAAGCGCCTGCAGCAGCTGCTC
CTCCTCCAATCCTCCCCGGCCTACCTGGAGCGCGTTGCCGCTTCCATGGA
GCAGGCACGAAGGCGGCTTGTCAATCTCGAAGACAGACGACGGGAGACGG
AGGCCCGCCGCAAAGACATCCTGCTCAAACTGGCACAGACAGTCCCGGAA
CGCGAGGCGACCGCGGCCGCGACCATCGCGCTGAAAAAAAAGATGGAGGC
CTCGTTGCAAGAGCTCTACAACGGCAGGAGCATTGTGATCACGGGCGGCG
TCGAAACTTTCTCAGTACAAGCTCATGGCGCCAACCAGTAAAGACGTATT
ATTAATGGATTCAATTCCGTTTCTGTCCACCAAAAAGAGTAATTCCGGGG
CAATACCCGTATATGTGCCCTATTCCAAATTACAAGATGGGATTTGATAT
GAGGAAAGTAAAGGACATGAAGAGATGGGGGGGAGGTTGGGAATTGAAAA
AGGAAATTAATTGCATGGATGGATCTTTTGAAAAATCGACTACCACAAAG
GGTGAAAAATCTAAACTAATTATTGCTCCCTCACCATGTTTCGGCGTAAT
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