EWM22349.1, cds8322 (CDS) Nannochloropsis gaditana

Overview
NameEWM22349.1
Unique Namecds8322
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:443289..443455 -
Alignment locationKK037248.1:443006..443100 -
Alignment locationKK037248.1:441254..442842 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22349.1
Productcdk5 regulatory subunit associated protein 3
Orig transcript idgnl|cribi|Naga_100208g5.7567.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:443289..443455 -
KK037248.1supercontigKK037248.1:443006..443100 -
KK037248.1supercontigKK037248.1:441254..442842 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR008491DUF773
Homology
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|585102849|gb|EWM22349.1| (cdk5 regulatory subunit associated protein 3 [Nannochloropsis gaditana])

HSP 1 Score: 1271.14 bits (3288), Expect = 0.000e+0
Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 0
Query:    1 MGFDMRKVKDMKRWGGGWELKKEINCMDGSFEKSTTTKGEKSKLIIAPSPCFGVIPDVLLMDSIPFLSTKKSNSGAIPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSLGAETGANDQDARRMGGGIPADESSVQEGEKVGMNRSGASGHCSWVAGGHSCTSSAWRTEGDNPKASPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITGGVETFSVQAHGANQ 616
            MGFDMRKVKDMKRWGGGWELKKEINCMDGSFEKSTTTKGEKSKLIIAPSPCFGVIPDVLLMDSIPFLSTKKSNSGAIPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSLGAETGANDQDARRMGGGIPADESSVQEGEKVGMNRSGASGHCSWVAGGHSCTSSAWRTEGDNPKASPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITGGVETFSVQAHGANQ
Sbjct:    1 MGFDMRKVKDMKRWGGGWELKKEINCMDGSFEKSTTTKGEKSKLIIAPSPCFGVIPDVLLMDSIPFLSTKKSNSGAIPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSLGAETGANDQDARRMGGGIPADESSVQEGEKVGMNRSGASGHCSWVAGGHSCTSSAWRTEGDNPKASPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITGGVETFSVQAHGANQ 616          
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|762168218|ref|XP_011422470.1| (PREDICTED: CDK5 regulatory subunit-associated protein 3-like [Crassostrea gigas] >gi|762168220|ref|XP_011422472.1| PREDICTED: CDK5 regulatory subunit-associated protein 3-like [Crassostrea gigas])

HSP 1 Score: 152.525 bits (384), Expect = 3.243e-36
Identity = 133/565 (23.54%), Postives = 260/565 (46.02%), Query Frame = 0
Query:   77 IPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSLG-AETGANDQDARRMGGGIPA--DESSVQEGEKVGMNRS-----------GASGHCSWVAGGHSCTSSAWRTE---GDNPKA----------SPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHV---LLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDR----RRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITGGVETF 607
            +P+ + ++KL DWLI+R+   ++W  +   ++  + E L ++     ++ + ++G   + ++++ C +I+ LL+  ++   KN+FG Y+S  +K W  +++ Y K+ VYLGE A++LA +  Y  P+L+++I   ++  ++CER+  DY    +E   +Y A C+  G  +E   I  E  +L                     ++LP     +     A  + K++ YYD F  F+    E++ ++                 +  ++  +E+  +T  Q R  ++    E+ K  +  +E     Q    +  G P    ES++  G+++  N +           G     + V G  S ++    T+    D P A          S + NP  R    ++L+ELEAFL QR  E+ D+D     +L S   ++A   L   S   V   +SQV+  + A    ++  LL +++SP Y++R+  +++Q    +++L D+     ++   + KD   +L +  P+ E     T  ++K+ME+ +   Y  R + I G + T 
Sbjct:    7 LPIDIHFNKLLDWLINRRHCIQEWPARAVVIREKINEALTDM-PQNPQILELLEG---THINYFHCKKIIELLKKDEESGKKNVFGQYSSQRMKDWSEVIKLYEKDGVYLGETAQMLARNVNYEVPALKKQIAKCQQIKKECERKQTDYTSKAEELRKKYDATCKQMG--IEGKKIKTELAALV--------------------QDLPAQFHQISE--AASKLSKSVQYYDEFVDFVTKRSEEKRDS-----------------LPMLKYIMENGNTTTYQWRTGQKPEVIEEAKVFIDTSEENEVGQVTDDIDWGDPGAMTESAIDFGDEIDFNMADITVETGGTEEGDQNPDTGVTGHDSDSNGIDWTDVVIVDKPDAEGVAKGEDAMSLLDNPRTRTLFIDDLMELEAFLMQRLFEL-DSDSAGGDVLSSSQMQDAPSSLQLQSP-VVTKMVSQVRDVIAAFSTVKMHHLLSIRNSPRYVDRLKETLKQ----MLSLADKMVFLEKQMVVKYKDADSELREIQPKLELVIKRTKEMQKQMESEISNRYKDRVVNIMGEINTM 520          
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|405963880|gb|EKC29412.1| (CDK5 regulatory subunit-associated protein 3 [Crassostrea gigas])

HSP 1 Score: 152.14 bits (383), Expect = 2.754e-35
Identity = 134/569 (23.55%), Postives = 259/569 (45.52%), Query Frame = 0
Query:   77 IPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSLG-AETGANDQDARRMGGGIPA--DESSVQEGEKVGMNR------------------SGASGHCSWVAGGHSCTSSAWRTEGDNPKA----------SPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHV---LLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDR----RRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITGGVETF 607
            +P+ + ++KL DWLI+R+   ++W  +   ++  + E L ++     ++ + ++G   + ++++ C +I+ LL+  ++   KN+FG Y+S  +K W  +++ Y K+ VYLGE A++LA +  Y  P+L+++I   ++  ++CER+  DY    +E   +Y A C+  G  +E   I  E  +L                     ++LP     +     A  + K++ YYD F  F+    E++ ++                 +  ++  +E+  +T  Q R  ++    E+ K  +  +E     Q    +  G P    ES++  G+++  N                   +G +GH S  + G   T        D P A          S + NP  R    ++L+ELEAFL QR  E+ D+D     +L S   ++A   L   S   V   +SQV+  + A    ++  LL +++SP Y++R+  +++Q    +++L D+     ++   + KD   +L +  P+ E     T  ++K+ME+ +   Y  R + I G + T 
Sbjct:    7 LPIDIHFNKLLDWLINRRHCIQEWPARAVVIREKINEALTDMPQNP-QILELLEG---THINYFHCKKIIELLKKDEESGKKNVFGQYSSQRMKDWSEVIKLYEKDGVYLGETAQMLARNVNYEVPALKKQIAKCQQIKKECERKQTDYTSKAEELRKKYDATCKQMG--IEGKKIKTELAALV--------------------QDLPAQFHQISE--AASKLSKSVQYYDEFVDFVTKRSEEKRDS-----------------LPMLKYIMENGNTTTYQWRTGQKPEVIEEAKVFIDTSEENEVGQVTDDIDWGDPGAMTESAIDFGDEIDFNMADITVETGGTEEGDQNPDTGVTGHDS-DSNGIDWTDVVIV---DKPDAEGVAKGEDAMSLLDNPRTRTLFIDDLMELEAFLMQRLFEL-DSDSAGGDVLSSSQMQDAPSSLQLQSP-VVTKMVSQVRDVIAAFSTVKMHHLLSIRNSPRYVDRLKETLKQ----MLSLADKMVFLEKQMVVKYKDADSELREIQPKLELVIKRTKEMQKQMESEISNRYKDRVVNIMGEINTI 520          
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|1025030307|ref|XP_016324715.1| (PREDICTED: CDK5 regulatory subunit-associated protein 3 [Sinocyclocheilus anshuiensis])

HSP 1 Score: 149.443 bits (376), Expect = 3.162e-35
Identity = 135/547 (24.68%), Postives = 244/547 (44.61%), Query Frame = 0
Query:   73 NSGAIPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSLGAETGANDQDARRMGGGIPADESSVQEGEKVGMN-----RSGASGHCSW------------VAGGHSCTSSAWRTEGDNPKASPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITG 602
            N   +P+ +  SKL DWL+DR+     W   +  ++  +   ++++     E+   + G   S +H++ C +I+ +L+G +   TKNIFG Y+S  +K W  I+  Y K+NVYL E A +L     Y  P+L+++++  ++  ++  RR  + +    +   RY AAC+ +G+  E   + RE ++L                     K+LP  L    ++  A  + +A+ +Y  F  F+    E+         ++ N      T V E +        T+ +      A P    ++++      +  D   +  GI     SV++G  +G++        ++G   W            V  G  C     R E      S + N   R    NEL ELE FL QR  E+ +   ++ +S   + A   +   + E VE  L+ V+  L+ +   R+Q L ++Q+SP Y+ERV+  + Q  ++   L  +R     +R++ L + A+  P  +  AA T  L+K +EA + + YN R + + G
Sbjct:    3 NIQNVPIDIQTSKLLDWLVDRRHCTLKWQSAVMTIREKINAAIQDMPENE-EIKQLLSG---SYIHYFHCLRIIEILKGTEVS-TKNIFGRYSSQRMKDWQEIVSLYEKDNVYLAEVASILIRSVSYEGPALRKQVSKAQQLQQELSRRELECQSGATDMRERYYAACKQYGIQGE--NVARELQALV--------------------KDLPVVLKETGKK--AACLDEAIKFYAAFINFVSDWSEEALPILRFVQKKGN------TTVYEWKT---GNVPTVVERPVMEEAPPDVVTEETIDWGDLGDGADTEEVNFGI-----SVEDGVDLGISPEIGTEETSAGGIDWGASELTPVEIEIVDVGTDCPDGVARGED---ALSLLENSQTRGQFINELKELEMFLCQRLSEMREEGDLVTMS-QFQLAPSVIQAQTPERVEAMLADVRDLLNGLTSVRMQHLFMIQASPRYVERVSELLRQKLKQADILVLKRGTLAEKRQEALEEQAKLEPRIDLLAARTKELQKLIEADISKRYNNRPVNLMG 502          
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|1026757755|gb|OAE19959.1| (hypothetical protein AXG93_1520s1330 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 149.058 bits (375), Expect = 1.004e-34
Identity = 138/578 (23.88%), Postives = 246/578 (42.56%), Query Frame = 0
Query:   76 AIPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRL------EDRFSTLCQAR---------CHRRACPREQKKQSLGAETGANDQDARRMG-------------GGIPADESSVQEGEKVGMNRSGASGHCSWVAG----GHSCTSSAWRTEGDNPKAS------PIGNPAFRKALT-----------NELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITGGV 604
            ++P+ + YSKL DWL+DR+++P DW +KL +V++ ++     L      V  W    E+  + +    +I  +L  A    ++N  G  T A  + WD I+ AY K+ +YLGEAA++L  +T Y  P L+R++   ++ V D ER+  + +++  +   +Y+ AC+  G  V+ T I  E  +L                     K LP     V   LC  ++G A+DYY  F ++ H  + D +       ++  +        V +  R       +D+  T+ QA                   +    +  + GA + D    G             G +  D  +V E         GA    +W       G   T+    TE D+P ++       +     R+ L+           ++L EL+ FL+QR  E+   D   L +     A   +  +  E++   +S +  AL+ +  ++ + L+L+ +S  YLER+ AS+ Q ++    L    ++   +R ++   L    P++EA    T ++K  +E SL   YN R + I G +
Sbjct:   11 SLPIDITYSKLADWLVDRRKIPADWRKKLASVQAKVRTAFSTLPRS---VDPWFLTLEADGVGYLEAKRIRDVL-LASSPDSRNFLGRATGAAGE-WDAIVSAYEKDLLYLGEAAQILVQNTNYDIPDLKRQVVKLQQLVTDSERKEAEVKRSAAQSAIKYQQACQELG--VQGTNIRAELLALG--------------------KTLPNIFANVIEALCDGMVGSAIDYYQAFTKYAHAGENDESTIVVPTLKELRDNPPDVHAAVHLSPRTSHQTNEKDKLETVAQADLSTTEIDWGIDMAGSTEAEIPLDIDWDIGAVEPDLDNGGNEGEVAGSEPFVPGAVVEDMQAVPEISWDIEVPDGAGTEINWDIDVEDYGLVSTTDVLPTE-DHPLSNGKSDLDSVAGEEVRQTLSLVETDYRNRLLDDLFELKTFLKQRLEEMESDDTAALQNQVQAVAPTWIPQHGSESLMAMVSSIAQALNLLTNRKTRDLILISTSVRYLERLEASLIQKKQNESKLHQTMKDLSNKRLELRNNLTMIWPKQEAMVDRTKSIKLLVEKSLSAQYNDRKVNIIGEI 560          
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|808858378|gb|KKF10771.1| (CDK5 regulatory subunit-associated protein 3 [Larimichthys crocea])

HSP 1 Score: 148.288 bits (373), Expect = 4.743e-34
Identity = 136/544 (25.00%), Postives = 244/544 (44.85%), Query Frame = 0
Query:   69 TKKSNSGAIPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSL---GAETGANDQDARRMGGGI-------PADESSVQEGEKVGMNRSGASGHCSWVAGGHSCTSSAWRTEGDNPKASPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITG 602
            TK+ N   +P+ +  SKL DWL+DR+     W   +K ++  +   ++++     E+   + G   S +H++ C +I+ +L+G +   +KNIFG Y+S  +K W  I+  Y  +N+YL E A LL  +  Y  P+L++++   ++  ++  RR  + + +  +   RY AAC+ +G  +    + RE ++L                     K+LP  L  V ++  A  + K + +Y  F  F+    E      + A ++ N        V   E R   +  T+ +      A P      ++      TGA  QD   +  G+       P+ E +   G   G +   A      V  G  C     R E      + + N   R    +EL+ELEAFL QR  E+G+   V+ +S   + A   +   S+E +   LS+VQ  L  +   R+Q L ++Q+SP Y+ERV   + Q  ++   L  +      +R++ L + ++  P  +  A  T  L+K ++A + + Y+ R + + G
Sbjct:  182 TKEQNIQNLPIDIQTSKLLDWLLDRRHCNLKWQSAVKEIREKINAAIQDMPENE-EIKQLLSG---SYIHYFHCLRIVEILKGTE-ASSKNIFGRYSSQRMKDWQEIVSLYEVDNLYLAEVASLLTRNVSYEGPALRKQLAKAQQLQQELSRREVECQSSAADLRERYYAACKQYG--ITGDNVARELQALV--------------------KDLPAVLDEVGKD--AAKLEKQIQFYTAFTNFVCEWSEPVLPTLTFAQKRGN--------VTFYEWR-TGKVPTVVERPAAEEAAPDTATDDAIDWGDFGTGAATQDVITVEDGVDWGISLEPSSEDAAAGGIDWG-DSEAAPIEIEVVDAGTDCPEGVARGED---ALTILENSQSRSLFIDELMELEAFLTQRVNEMGEEGDVVAMS-QFQLAPSVIQGQSREHIREMLSEVQDLLGRLTSLRMQHLFMIQASPRYVERVTEVLRQKLKQADILVLKGATMVEKRQEALEEQSRLEPRVDLLAGCTRELQKLIQADVSKKYHNRPVNLMG 682          
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|1025200521|ref|XP_016425924.1| (PREDICTED: CDK5 regulatory subunit-associated protein 3 isoform X1 [Sinocyclocheilus rhinocerous])

HSP 1 Score: 145.591 bits (366), Expect = 6.692e-34
Identity = 133/542 (24.54%), Postives = 240/542 (44.28%), Query Frame = 0
Query:   73 NSGAIPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSLGAETGANDQDARRMGGGIPADESSVQEGEKVGMNRSGASGHCSW------------VAGGHSCTSSAWRTEGDNPKASPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITG 602
            N   +P+ +  SKL DWL+DR+     W   +  ++  +   ++++     E+   + G   S +H++ C +I+ +L+G +   TKNIFG Y+S  +K W  I+  Y K+NVYL E A +L     Y  P+L+++++  ++  ++  RR  + +    +   RY AAC+ +G+  E   + RE ++L                     K+LP  L    ++  A  + +A+ +Y+ F  F+    E+         ++ N      T V E +        T+ +      A P    ++++      +  D   +  GI   E  V    ++G   + A G   W            V  G  C     R E      S + N   R    NEL ELE FL QR  E+ +   ++ +S   + A   +   + E VE  L+ V+  L+ +   R+Q L ++Q+SP Y+ERV+  + Q  ++   L  +      +R++ L + A+  P  +  AA T  L++ +EA + + YN R + + G
Sbjct:    3 NIQNVPIDIQTSKLLDWLVDRRHCTLRWQSAVMTIREKINAAIQDMPENE-EIKQLLSG---SYIHYFHCLRIIEILKGTE-ASTKNIFGRYSSQRMKDWQEIVSLYEKDNVYLAEVASILIRSVSYEGPALRKQVSKAQQLQQELSRRELECQSGATDMRERYYAACKQYGIQGE--NVARELQALV--------------------KDLPVVLEETGKK--AACLDEAIKFYEAFINFVSDWSEEALPILRFVQKKGN------TTVYEWKT---GNVPTVVERPVMEEAPPDVVTEETIDWGDLGDGADTEEVNFGISV-EDGVGISPEIGTEETSAGG-IDWGASELTPVEIEIVDVGTDCPDGVARGED---ALSLLENSQTRGQFINELKELEMFLCQRLSEMREEGDLVTMS-QFQLAPSVIQAQTPERVEAMLADVRDLLNGLTSVRMQHLFMIQASPRYVERVSELLRQKLKQADILVLKCGTLAEKRQEALEEQAKLEPRIDLLAARTKELQELIEADISKRYNNRPVNLMG 500          
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|1109013603|ref|XP_019109732.1| (PREDICTED: CDK5 regulatory subunit-associated protein 3 isoform X2 [Larimichthys crocea] >gi|1109013636|ref|XP_019109743.1| PREDICTED: CDK5 regulatory subunit-associated protein 3 isoform X2 [Larimichthys crocea] >gi|808858379|gb|KKF10772.1| CDK5 regulatory subunit-associated protein 3 [Larimichthys crocea])

HSP 1 Score: 145.206 bits (365), Expect = 9.070e-34
Identity = 136/543 (25.05%), Postives = 244/543 (44.94%), Query Frame = 0
Query:   72 SNSGAIPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTG--IGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSL---GAETGANDQDARRMGGGI-------PADESSVQEGEKVGMNRSGASGHCSWVAGGHSCTSSAWRTEGDNPKASPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITG 602
            +N   +P+ +  SKL DWL+DR+     W   +K ++  +   ++++     E+   + G   S +H++ C +I+ +L+G +   +KNIFG Y+S  +K W  I+  Y  +N+YL E A LL  +  Y  P+L++++   ++  ++  RR  + + +  +   RY AAC+ +G+    TG  + RE ++L                     K+LP  L  V ++  A  + K + +Y  F  F+    E      + A ++ N        V   E R   +  T+ +      A P      ++      TGA  QD   +  G+       P+ E +   G   G +   A      V  G  C     R E      + + N   R    +EL+ELEAFL QR  E+G+   V+ +S   + A   +   S+E +   LS+VQ  L  +   R+Q L ++Q+SP Y+ERV   + Q  ++   L  +      +R++ L + ++  P  +  A  T  L+K ++A + + Y+ R + + G
Sbjct:    2 TNIQNLPIDIQTSKLLDWLLDRRHCNLKWQSAVKEIREKINAAIQDMPENE-EIKQLLSG---SYIHYFHCLRIVEILKGTE-ASSKNIFGRYSSQRMKDWQEIVSLYEVDNLYLAEVASLLTRNVSYEGPALRKQLAKAQQLQQELSRREVECQSSAADLRERYYAACKQYGI----TGDNVARELQALV--------------------KDLPAVLDEVGKD--AAKLEKQIQFYTAFTNFVCEWSEPVLPTLTFAQKRGN--------VTFYEWR-TGKVPTVVERPAAEEAAPDTATDDAIDWGDFGTGAATQDVITVEDGVDWGISLEPSSEDAAAGGIDWG-DSEAAPIEIEVVDAGTDCPEGVARGED---ALTILENSQSRSLFIDELMELEAFLTQRVNEMGEEGDVVAMS-QFQLAPSVIQGQSREHIREMLSEVQDLLGRLTSLRMQHLFMIQASPRYVERVTEVLRQKLKQADILVLKGATMVEKRQEALEEQSRLEPRVDLLAGCTRELQKLIQADVSKKYHNRPVNLMG 499          
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|1109013601|ref|XP_019109730.1| (PREDICTED: CDK5 regulatory subunit-associated protein 3 isoform X1 [Larimichthys crocea] >gi|1109013634|ref|XP_019109742.1| PREDICTED: CDK5 regulatory subunit-associated protein 3 isoform X1 [Larimichthys crocea])

HSP 1 Score: 144.436 bits (363), Expect = 1.702e-33
Identity = 136/542 (25.09%), Postives = 243/542 (44.83%), Query Frame = 0
Query:   73 NSGAIPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTG--IGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRTEANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSL---GAETGANDQDARRMGGGI-------PADESSVQEGEKVGMNRSGASGHCSWVAGGHSCTSSAWRTEGDNPKASPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITG 602
            N   +P+ +  SKL DWL+DR+     W   +K ++  +   ++++     E+   + G   S +H++ C +I+ +L+G +   +KNIFG Y+S  +K W  I+  Y  +N+YL E A LL  +  Y  P+L++++   ++  ++  RR  + + +  +   RY AAC+ +G+    TG  + RE ++L                     K+LP  L  V ++  A  + K + +Y  F  F+    E      + A ++ N        V   E R   +  T+ +      A P      ++      TGA  QD   +  G+       P+ E +   G   G +   A      V  G  C     R E      + + N   R    +EL+ELEAFL QR  E+G+   V+ +S   + A   +   S+E +   LS+VQ  L  +   R+Q L ++Q+SP Y+ERV   + Q  ++   L  +      +R++ L + ++  P  +  A  T  L+K ++A + + Y+ R + + G
Sbjct:    4 NIQNLPIDIQTSKLLDWLLDRRHCNLKWQSAVKEIREKINAAIQDMPENE-EIKQLLSG---SYIHYFHCLRIVEILKGTE-ASSKNIFGRYSSQRMKDWQEIVSLYEVDNLYLAEVASLLTRNVSYEGPALRKQLAKAQQLQQELSRREVECQSSAADLRERYYAACKQYGI----TGDNVARELQALV--------------------KDLPAVLDEVGKD--AAKLEKQIQFYTAFTNFVCEWSEPVLPTLTFAQKRGN--------VTFYEWR-TGKVPTVVERPAAEEAAPDTATDDAIDWGDFGTGAATQDVITVEDGVDWGISLEPSSEDAAAGGIDWG-DSEAAPIEIEVVDAGTDCPEGVARGED---ALTILENSQSRSLFIDELMELEAFLTQRVNEMGEEGDVVAMS-QFQLAPSVIQGQSREHIREMLSEVQDLLGRLTSLRMQHLFMIQASPRYVERVTEVLRQKLKQADILVLKGATMVEKRQEALEEQSRLEPRVDLLAGCTRELQKLIQADVSKKYHNRPVNLMG 500          
BLAST of EWM22349.1 vs. NCBI_GenBank
Match: gi|558170640|ref|XP_006098981.1| (PREDICTED: CDK5 regulatory subunit-associated protein 3 isoform X1 [Myotis lucifugus])

HSP 1 Score: 144.436 bits (363), Expect = 2.115e-33
Identity = 133/544 (24.45%), Postives = 242/544 (44.49%), Query Frame = 0
Query:   77 IPVYVPYSKLQDWLIDRKQLPRDWTEKLKNVKSLLQEGLRELETGGGEVADWVKGKESSALHFYTCTQIMSLLEGAQQGRTKNIFGSYTSALLKLWDNILRAYRKENVYLGEAARLLATHTMYTCPSLQRRITGYEKQVEDCERRLNDYRQAIKEGNARYRAACEAWGLDVEQTGIGRERKSLAPPPNGAEKEVWRSLLTRMAEKELPEALTAVERELCAELIGKALDYYDRFRRFLHTHDEDRT---------EANSAADEQKNEEGGRKTCVVEVEGRLEDRFSTLCQARCHRRACPREQKKQSL-----GAETGANDQDARRMGG---GIPADESSVQE-GEKVGMNRSGASGHCSWVAGGHSCTSSAWRTEGDNPKASPIGNPAFRKALTNELLELEAFLQQRRLEVGDADHVLLVSIHCREAVGGLLDNSKEAVETCLSQVQTALDAVQGKRLQQLLLLQSSPAYLERVAASMEQARRRLVNLEDRRRETEARRKDILLKLAQTVPEREATAAATIALKKKMEASLQELYNGRSIVITG 602
            +P+ +  SKL DWL+DR+     W   +  ++  +   ++++     E+A  + G   S +H++ C +I+ LL+G +   TKNIFG Y+S  +K W  I+  Y K+N YL E + LL  +  Y  PSL+++I   ++  ++  R+  + +    E   ++  +C+ +G+    TG    R+ LA                    KELP  L  +     A  +G+A+D Y  F  F+    E++            N+   E +    G +  VVE               R H    P + ++ ++     GAE  +   D  +  G   GI  +  S +  G+ +      A+   + V  G        R    +   + +  P  R    +EL+ELE FL QR +E+ +   +L VS   + A   L   +K  +ET +S +Q  +  +   R+Q L ++ +SP Y++RV   ++Q  ++   L  ++     ++++ L + A   P+ +     T  L+K +EA + + YNGR + + G
Sbjct:    7 VPIDIQTSKLLDWLVDRRHCNLKWQSLVLTIREKINAAIQDMPESE-EIAQLLSG---SYIHYFHCLRIVDLLKGTE-ASTKNIFGRYSSQRMKDWQEIVALYEKDNSYLVELSSLLVRNVTYEIPSLKKQIAKCQQLQQEYSRKEEEGQGGAAEMREQFYHSCKQYGI----TGDNVRRELLA------------------LVKELPTQLAEIGAR--ARSLGEAIDLYQAFVGFVCESPEEQVLPMLRFVQKRGNATVYEWRT---GTEPSVVE---------------RPHLEEPPEQVEEDAIDWGDFGAEVASEGTDPAQPAGIDWGISLESDSKEAGGDGIDWGEDAAALQITVVEAGTEAPEGVAR---GSDALTLLEYPETRNQFIDELMELEIFLSQRAVEMSEEADILSVS-QFQLAPAILQGQTKAKMETLVSALQDLIGRLTNLRMQHLFMILASPRYVDRVTEFLQQKLKQSQLLALKKELMVQKQQEALQEQAALEPKLDLLLEKTKELQKLIEADISKRYNGRPVNLMG 499          
The following BLAST results are available for this feature:
BLAST of EWM22349.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102849|gb|EWM22349.1|0.000e+0100.00cdk5 regulatory subunit associated protein 3 [Nann... [more]
gi|762168218|ref|XP_011422470.1|3.243e-3623.54PREDICTED: CDK5 regulatory subunit-associated prot... [more]
gi|405963880|gb|EKC29412.1|2.754e-3523.55CDK5 regulatory subunit-associated protein 3 [Cras... [more]
gi|1025030307|ref|XP_016324715.1|3.162e-3524.68PREDICTED: CDK5 regulatory subunit-associated prot... [more]
gi|1026757755|gb|OAE19959.1|1.004e-3423.88hypothetical protein AXG93_1520s1330 [Marchantia p... [more]
gi|808858378|gb|KKF10771.1|4.743e-3425.00CDK5 regulatory subunit-associated protein 3 [Lari... [more]
gi|1025200521|ref|XP_016425924.1|6.692e-3424.54PREDICTED: CDK5 regulatory subunit-associated prot... [more]
gi|1109013603|ref|XP_019109732.1|9.070e-3425.05PREDICTED: CDK5 regulatory subunit-associated prot... [more]
gi|1109013601|ref|XP_019109730.1|1.702e-3325.09PREDICTED: CDK5 regulatory subunit-associated prot... [more]
gi|558170640|ref|XP_006098981.1|2.115e-3324.45PREDICTED: CDK5 regulatory subunit-associated prot... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8349rna8349Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications