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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100066g26.10332.mrna |
| Orig protein id | gnl|cribi|Naga_100066g26.10332 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:415425..417795 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8337 ID=rna8337|Name=rna8337|organism=Nannochloropsis gaditana|type=mRNA|length=1776bp
ATGTTCGCAGGCAACCTCCCCCTTGGTCTGCTTGTTCTGACAATACCCAC
GGCACTTTTCAGTCCCTCCCACGTTCTTAGCTTCCGCCGCATGCGCAGGA
CCCTTCCTACTTTCATCGTGACAGACCTAGTACCATCAAGAGAAGGTTGG
GGGCGGCGATTTATGACGATGGCTTCGGCAGAGGCATCCCATCGGCCTCA
AAAAGTAGCCGTGCTGGGGGCCGGCGCGGCGGGCCTTGTGACAGGGCGCC
TCTTCCACGAGGCCGGATTTCGAGTGCGTATATTCGAGAAAACATCCACA
GTCGGCGGAGTTTGGAAATACCGGCCCGAGGATGTCGTGTACAGATCGTT
GGTGACGAATTTACCCAAGGAGATCATGGCCTTCCTGGACACGCCCTTCG
ACCCCTCCCTTCCGTCCTTTTTAAGACACACGGACGTTCAGACGTATTTG
GAGGGGTATGCGAAGCAGTACGACGTAGAAAAATTGATCACCTTCGACAC
GGAGGTGAAAGAAGTGAGACCTGTGCGACGGACCAGGGGCCAGGAGGGAG
AGGGGGCCGCGCCGTATCCTCCGGGTGACTACACGAGGGAGCATGGCCTG
GGGGCGGCCAGAGAGAAAGGAGGTCCGGAGGGGGCGGGAGAGGAGGGCGA
GGCGCCAATGTGGCGAGTCACGGTCGTGCGACAGGCGGGTGGCTCTGTCG
CCGGCGCGTGTGAGGGGGTTCCGGAATCGGAGGTCTTCGACGCGGTCGTG
GTGTGCAACGGGCATTACCAAGTACCTCATTGTCCGGACCTCCCGGGGCT
GCGTGAGCATTACCGCGGTCGGGTGATGCATTCCCGTGACTACGACCACC
CGGAGGCCCTGCGGGGTTTGAAGGTGTTGTGCGTGGGATACAGGGCGAGT
GGGACGGATATAGCCAGGGAGGTGGCCCAGGTCGCTTCCGAGGTCCATGT
GGTGGATCGGCGCCTCTCCAAAATGACGGAAGACGGAAAGGATGAGGCTG
GGTCCTTGCAGCGGGGGAACATCTACCGACGCCCGGGCTTGCGAGTGTTT
TTGCCGGGGGGCGACGGGAAGAGCGCGATGTTTGAGGACGGCAGTGTCTG
TACGGGCATCGACCTGGTGCTGTACTGCACGGGCTTTCAGTACCACATGC
CTTTCCTGAGCGGCGGCTCCGCCTTTGAGAGTCGCCCCTTGTCGCCCTCC
GCCCTTCTCTCGGACGCGCGGCTCCTCCGCGTAGAGGACCGTGCGGTCTT
CCCTCTCTATCAGCACCTGTTTCACGCCTTTTTTCCCTCCCTCGTCTTCA
TTGGCCTCCTCCATTCCGTCGTTCCTTTCCCCCTCTTTGAGCTCCAAGCC
CTATGGGCCCTGAAAACGCTTCGCCAGCCCCTAGGTTCGGACCCTCCGCC
TCCGTCCCTCCCTCCCCGTCGGCGTCGGTTCCAGTGGCTGGAGGAGGAGA
AAATGAGGCAAGAGGCCGCAGGACGGGTGCTGGGGAGGGACTGGTTCTTC
TTGGGCCCCGGACAATGGGCGTACAAGCGACTGCTGGCGCGGGAGGCAGG
GTGCCTGACAAGCGCCCTGGAGGAGGACCTTCAGGTGCGGGAAGGGATCT
ACAACGACGTCTCCAATCGCCGCCCCGTCTTTCCCGGAGGCTCGGACGCT
TATCGGCGGTGTGAATATAGGCGGGTGGCAGGCGGAGAGGGGTGGGAGGT
GGAGGTGGGGGGGAAAGGAAGTTTTGAGGGGGCCGGAGAGGAGAAGGGGG
AGGGGGCGAGGAAAGCCGAGTGCTAG back to topprotein sequence of rna8337 >rna8337-protein ID=rna8337-protein|Name=rna8337|organism=Nannochloropsis gaditana|type=polypeptide|length=493bp
MKPVDHIRAFLSRSPAPRTLLILFSSLVGGVVARVFLKHFRSLALPASLR
CLLRGNRGGERLPPEVAERIIAHMNKDHGAQLVLYAKHYAGLASTIAATL
TYIDSTGVELSVTLSSSNAPRRVYIAFPHGSLPSVHDARAVLVAMAETAA
QALGSEVKAGESDENKSDPLTDTEHGFARAEMGSKKCLAGTVKKYDTHMF
VLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVA
ECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRW
GNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKRHPSSASHPAPHA
FYDADALFRLPPEVVRGFSALLASPEADPTVAYYAVIDGNVLAMCLGAST
PFPPSHLPSLARTRALLVRVQGDSRKEREVVYAYATVFRTLEEYHREREG
RCCLCLPPCRHALHRWCCERRMRKETLRVVEGAFRTMKRELGA back to topmRNA from alignment at KK037248.1:415425..417795- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8337 ID=rna8337|Name=rna8337|organism=Nannochloropsis gaditana|type=mRNA|length=2371bp|location=Sequence derived from alignment at KK037248.1:415425..417795- (Nannochloropsis gaditana)
ATGAAACCAGTAGATCATATTCGCGCATTTTTGTCCCGTAGTCCAGCTCC
TCGAACACTCCTGATCCTATTCTCATCGCTTGTTGGTGGGGTTGTGGCAA
GAGTGTTTCTCAAGCACTTTCGTTCCTTGGCGTTGCCTGCCTCACTGCGA
TGTCTTTTGAGAGGGAATCGAGGGGGAGAGAGATTGCCACCTGAGGTAGC
TGAACGAATCATTGCCCACATGAATAAAGACCACGGAGCCCAACTCGTCC
TATACGCAAAGCATTACGCTGGTCTCGCCTCGACCATCGCGGCCACCCTG
ACCTACATAGATTCGACTGGTGTCGAACTTTCGGTCACGCTCAGCTCATC
CAATGCTCCACGTCGGGTCTATATCGCGTTTCCACACGGATCTCTTCCGT
CAGTCCACGATGCACGAGCGGTATTGGTGGCGATGGCTGAAACAGCCGCG
CAGGCCCTGGGCTCCGAGGTGAAAGCGGGCGAATCGGACGAGAATAAGTC
AGATCCCTTGACGGACACCGAACACGGCTTTGCCCGCGCAGAAATGGGCA
GCAAGAAATGCCTGGCAGGTACAGTGAAGAAGTACGACACGCACATGTTT
GTCTTGTGGAAACGGGCGCAGGAATGGCCCAAGCACGTTGAGGCGGGCGC
CGCGGGAAATGACCCGCCCACGCTCCCCCAAGCGCTCCATGCCGCTCTCA
AGGATTGTGCCGGCTCGATCTCCTGTGGAACAGTGAAGTTGAACGTGGCA
GAATGCAGGGATGGGTCGGAGGACAAGGACGGGACCCTCTTGCTCTTCCC
TCAGGAGCTTTGCGTGACGGGGGTGACTGAGGCCAATGCGAAGGCCGTGG
TGGAGGCGTTGTTGGCGGGCGAGGTGGAGGAAGGGGAGGACGGACGGTGG
GGGAACCGCACAAGGGTGGCGGCTGAGAAGGTCGGGCGTCTGAAGGGGGT
GGCGGTGAAAAGCCTTCCGGGCCAGCATCTCTTTGTCTGCTGCCATGGGA
ACCGGGACAAGCGGTGCGGGTCTGTCGGCCCATATCTGGTCACAGAACTT
CGGAGGTTGATCAAGGAGCGGGGGGAAGGAGCGGGGGGCGGGGTAGGCCC
GTGGGATTGCCCCGTGCGGGCCTGTAGTCATGTGGGGGGGCACGCCTACG
CCGGGAACGTGATCAGCTTTTGCCGGCGGGGCGAGGAGGGGCGGGTCTTG
GGGGACTGGTGGGGCTACGTGACCCCTGCGGTCGCCAGGGAGTTGGTCGA
GCGGCATTTGGGCAAGGGAGAGCTCTTGGCTTCGGTGTGGCGTGGACAGA
TGGGCCTGGGAGAGGAGGAGCAGAGGGGGGTCGTGGAGACGAGGGGATGC
CAGGGCTGTGCGTGTGGGAAGGCGGAGAGGCCTTGAGGACGGCGGGAGGT
GGTGAAGGGGGTGAAGGACAGGAGGTTGAGAATGTGTGGTGGCGTCTGCG
AGTCTGAGCCGTCGTAAGGGCAGCGTGTGGAGCGCTATTTTCATGCGGGG
GGCGCGAGGTTCAAGCGCTTGCCGAGACGATTTCTTTGAGAGTAGTACCG
CGAACTCTTTCGTTTCGTGCACGGTCCGGGTCATTGAGGAGCTCTCCGGT
GCCGACAGTGGCCTTAAAGAATGAAAGGCGGTCTAATAATCCGTCCGCGG
CATTCACCCCGTGCTTTTGCTCATTTCCCTGCCCTGCCCCTCCCTCCCTC
CCCTTGCCCACAGTCGCCGGCTTTGTTTTGCCCTCGTCTTCCACGAAGCT
GAAATCCGCGTGCCGGCGAAAAAATTGGGGGGGCTTCACGGCCGTTGACG
GTAGGGAAAAAGGAAAGCGGGGCGGAGTCGTACGGAGGGAGGGAGCAGAC
GGTGAGAGAGAAGGATGAAGACCTCCCTCCTTTCGTCCCCTCGCCGCTCC
AGCCACCCGTCCTCCGCCTCCCATCCCGCCCCTCACGCCTTCTACGACGC
GGACGCGCTTTTTCGCCTTCCCCCGGAGGTGGTTCGGGGATTTTCGGCCC
TTTTGGCCTCCCCCGAAGCCGACCCCACGGTCGCCTACTACGCCGTCATC
GACGGGAATGTGCTTGCCATGTGCCTCGGAGCCTCCACGCCCTTTCCTCC
TTCCCACCTTCCCTCCTTGGCGCGGACCCGGGCCTTGCTGGTCCGAGTCC
AAGGGGACAGTCGGAAGGAGAGGGAGGTGGTGTACGCGTATGCCACCGTC
TTCCGCACCCTGGAGGAGTATCACCGCGAACGTGAGGGCCGCTGCTGCTT
GTGTCTGCCGCCCTGCCGGCATGCTCTCCACCGGTGGTGTTGTGAGAGGA
GGATGAGAAAGGAGACCTTGCGGGTGGTGGAGGGGGCCTTTAGGACCATG
AAGCGGGAGCTGGGGGCGTGA back to topCoding sequence (CDS) from alignment at KK037248.1:415425..417795- >rna8337 ID=rna8337|Name=rna8337|organism=Nannochloropsis gaditana|type=CDS|length=2964bp|location=Sequence derived from alignment at KK037248.1:415425..417795- (Nannochloropsis gaditana)
CCACCCGTCCTCCGCCTCCCATCCCGCCCCTCACGCCTTCTACGACGCGG
ACGCGCTTTTTCGCCTTCCCCCGGAGGTGGTTCGGGGATTTTCGGCCCTT
TTGGCCTCCCCCGAAGCCGACCCCACGGTCGCCTACTACGCCGTCATCGA
CGGGAATGTGCTTGCCATGTGCCTCGGAGCCTCCACGCCCTTTCCTCCTT
CCCACCTTCCCTCCTTGGCGCGGACCCGGGCCTTGCTGGTCCGAGTCCAA
GGGGACAGTCGGAAGGAGAGGGAGGTGGTGTACGCGTATGCCACCGTCTT
CCGCACCCTGGAGGAGTATCACCGCGAACGTGAGGGCCGCTGCTGCTTGT
GTCTGCCGCCCTGCCGGCATGCTCTCCACCGGTGGTGTTGTGAGAGGAGG
ATGAGAAAGGAGACCTTGCGGGTGGTGGAGGGGGCCTTTAGGACCATGAA
GCGGGAGCTGGGGGCGTGAATGAAACCAGTAGATCATATTCGCGCATTTT
TGTCCCGTAGTCCAGCTCCTCGAACACTCCTGATCCTATTCTCATCGCTT
GTTGGTGGGGTTGTGGCAAGAGTGTTTCTCAAGCACTTTCGTTCCTTGGC
GTTGCCTGCCTCACTGCGATGTCTTTTGAGAGGGAATCGAGGGGGAGAGA
GATTGCCACCTGAGGTAGCTGAACGAATCATTGCCCACATGAATAAAGAC
CACGGAGCCCAACTCGTCCTATACGCAAAGCATTACGCTGGTCTCGCCTC
GACCATCGCGGCCACCCTGACCTACATAGATTCGACTGGTGTCGAACTTT
CGGTCACGCTCAGCTCATCCAATGCTCCACGTCGGGTCTATATCGCGTTT
CCACACGGATCTCTTCCGTCAGTCCACGATGCACGAGCGGTATTGGTGGC
GATGGCTGAAACAGCCGCGCAGGCCCTGGGCTCCGAGGTGAAAGCGGGCG
AATCGGACGAGAATAAGTCAGATCCCTTGACGGACACCGAACACGGCTTT
GCCCGCGCAGAAATGGGCAGCAAGAAATGCCTGGCAGGTACAGTGAAGAA
GTACGACACGCACATGTTTGTCTTGTGGAAACGGGCGCAGGAATGGCCCA
AGCACGTTGAGGCGGGCGCCGCGGGAAATGACCCGCCCACGCTCCCCCAA
GCGCTCCATGCCGCTCTCAAGGATTGTGCCGGCTCGATCTCCTGTGGAAC
AGTGAAGTTGAACGTGGCAGAATGCAGGGATGGGTCGGAGGACAAGGACG
GGACCCTCTTGCTCTTCCCTCAGGAGCTTTGCGTGACGGGGGTGACTGAG
GCCAATGCGAAGGCCGTGGTGGAGGCGTTGTTGGCGGGCGAGGTGGAGGA
AGGGGAGGACGGACGGTGGGGGAACCGCACAAGGGTGGCGGCTGAGAAGG
TCGGGCGTCTGAAGGGGGTGGCGGTGAAAAGCCTTCCGGGCCAGCATCTC
TTTGTCTGCTGCCATGGGAACCGGGACAAGCGCCACCCGTCCTCCGCCTC
CCATCCCGCCCCTCACGCCTTCTACGACGCGGACGCGCTTTTTCGCCTTC
CCCCGGAGGTGGTTCGGGGATTTTCGGCCCTTTTGGCCTCCCCCGAAGCC
GACCCCACGGTCGCCTACTACGCCGTCATCGACGGGAATGTGCTTGCCAT
GTGCCTCGGAGCCTCCACGCCCTTTCCTCCTTCCCACCTTCCCTCCTTGG
CGCGGACCCGGGCCTTGCTGGTCCGAGTCCAAGGGGACAGTCGGAAGGAG
AGGGAGGTGGTGTACGCGTATGCCACCGTCTTCCGCACCCTGGAGGAGTA
TCACCGCGAACGTGAGGGCCGCTGCTGCTTGTGTCTGCCGCCCTGCCGGC
ATGCTCTCCACCGGTGGTGTTGTGAGAGGAGGATGAGAAAGGAGACCTTG
CGGGTGGTGGAGGGGGCCTTTAGGACCATGAAGCGGGAGCTGGGGGCGTG
AATGAAACCAGTAGATCATATTCGCGCATTTTTGTCCCGTAGTCCAGCTC
CTCGAACACTCCTGATCCTATTCTCATCGCTTGTTGGTGGGGTTGTGGCA
AGAGTGTTTCTCAAGCACTTTCGTTCCTTGGCGTTGCCTGCCTCACTGCG
ATGTCTTTTGAGAGGGAATCGAGGGGGAGAGAGATTGCCACCTGAGGTAG
CTGAACGAATCATTGCCCACATGAATAAAGACCACGGAGCCCAACTCGTC
CTATACGCAAAGCATTACGCTGGTCTCGCCTCGACCATCGCGGCCACCCT
GACCTACATAGATTCGACTGGTGTCGAACTTTCGGTCACGCTCAGCTCAT
CCAATGCTCCACGTCGGGTCTATATCGCGTTTCCACACGGATCTCTTCCG
TCAGTCCACGATGCACGAGCGGTATTGGTGGCGATGGCTGAAACAGCCGC
GCAGGCCCTGGGCTCCGAGGTGAAAGCGGGCGAATCGGACGAGAATAAGT
CAGATCCCTTGACGGACACCGAACACGGCTTTGCCCGCGCAGAAATGGGC
AGCAAGAAATGCCTGGCAGGTACAGTGAAGAAGTACGACACGCACATGTT
TGTCTTGTGGAAACGGGCGCAGGAATGGCCCAAGCACGTTGAGGCGGGCG
CCGCGGGAAATGACCCGCCCACGCTCCCCCAAGCGCTCCATGCCGCTCTC
AAGGATTGTGCCGGCTCGATCTCCTGTGGAACAGTGAAGTTGAACGTGGC
AGAATGCAGGGATGGGTCGGAGGACAAGGACGGGACCCTCTTGCTCTTCC
CTCAGGAGCTTTGCGTGACGGGGGTGACTGAGGCCAATGCGAAGGCCGTG
GTGGAGGCGTTGTTGGCGGGCGAGGTGGAGGAAGGGGAGGACGGACGGTG
GGGGAACCGCACAAGGGTGGCGGCTGAGAAGGTCGGGCGTCTGAAGGGGG
TGGCGGTGAAAAGCCTTCCGGGCCAGCATCTCTTTGTCTGCTGCCATGGG
AACCGGGACAAGCG back to top
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