EWM22375.1, cds8310 (CDS) Nannochloropsis gaditana

Overview
NameEWM22375.1
Unique Namecds8310
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:416783..417795 -
Alignment locationKK037248.1:415425..415893 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22375.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100066g26.10332.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:416783..417795 -
KK037248.1supercontigKK037248.1:415425..415893 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0010181FMN binding
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR012349Split_barrel_FMN-bd
IPR030108Apd1
IPR019595DUF2470
IPR009737Suc_Fer-like
Homology
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|585102876|gb|EWM22375.1| (hypothetical protein Naga_100066g26 [Nannochloropsis gaditana])

HSP 1 Score: 1006.9 bits (2602), Expect = 0.000e+0
Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0
Query:    1 MKPVDHIRAFLSRSPAPRTLLILFSSLVGGVVARVFLKHFRSLALPASLRCLLRGNRGGERLPPEVAERIIAHMNKDHGAQLVLYAKHYAGLASTIAATLTYIDSTGVELSVTLSSSNAPRRVYIAFPHGSLPSVHDARAVLVAMAETAAQALGSEVKAGESDENKSDPLTDTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKRHPSSASHPAPHAFYDADALFRLPPEVVRGFSALLASPEADPTVAYYAVIDGNVLAMCLGASTPFPPSHLPSLARTRALLVRVQGDSRKEREVVYAYATVFRTLEEYHREREGRCCLCLPPCRHALHRWCCERRMRKETLRVVEGAFRTMKRELGA 493
            MKPVDHIRAFLSRSPAPRTLLILFSSLVGGVVARVFLKHFRSLALPASLRCLLRGNRGGERLPPEVAERIIAHMNKDHGAQLVLYAKHYAGLASTIAATLTYIDSTGVELSVTLSSSNAPRRVYIAFPHGSLPSVHDARAVLVAMAETAAQALGSEVKAGESDENKSDPLTDTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKRHPSSASHPAPHAFYDADALFRLPPEVVRGFSALLASPEADPTVAYYAVIDGNVLAMCLGASTPFPPSHLPSLARTRALLVRVQGDSRKEREVVYAYATVFRTLEEYHREREGRCCLCLPPCRHALHRWCCERRMRKETLRVVEGAFRTMKRELGA
Sbjct:    1 MKPVDHIRAFLSRSPAPRTLLILFSSLVGGVVARVFLKHFRSLALPASLRCLLRGNRGGERLPPEVAERIIAHMNKDHGAQLVLYAKHYAGLASTIAATLTYIDSTGVELSVTLSSSNAPRRVYIAFPHGSLPSVHDARAVLVAMAETAAQALGSEVKAGESDENKSDPLTDTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKRHPSSASHPAPHAFYDADALFRLPPEVVRGFSALLASPEADPTVAYYAVIDGNVLAMCLGASTPFPPSHLPSLARTRALLVRVQGDSRKEREVVYAYATVFRTLEEYHREREGRCCLCLPPCRHALHRWCCERRMRKETLRVVEGAFRTMKRELGA 493          
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|1079244263|ref|XP_018498021.1| (PREDICTED: altered inheritance of mitochondria protein 32-like isoform X4 [Pyrus x bretschneideri])

HSP 1 Score: 95.5153 bits (236), Expect = 9.706e-19
Identity = 59/167 (35.33%), Postives = 89/167 (53.29%), Query Frame = 0
Query:  172 DTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKR 338
            D + GF R+EM  +K LAGTV  YD H+F+ +K  + WP  VE    G++   LP+   +ALK     I+  T+ L V E R+G+E  DG +L+FPQ +   G+ E++  + V+ +L        D  W +  +              ++L G H+FVC HG+RDKR
Sbjct:   15 DEKFGFKRSEMFKEK-LAGTVNAYDRHVFLCYKTPEAWPSRVE----GSESDPLPKLFASALKARKNDIAVKTL-LTVIEGREGTEFSDGDVLIFPQMIKYRGLKESDVDSFVDDVLV------NDKLWASGVQ--------------EALTGSHVFVCAHGSRDKR 155          
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|1079244261|ref|XP_018498020.1| (PREDICTED: altered inheritance of mitochondria protein 32-like isoform X3 [Pyrus x bretschneideri])

HSP 1 Score: 95.1301 bits (235), Expect = 1.427e-18
Identity = 59/167 (35.33%), Postives = 89/167 (53.29%), Query Frame = 0
Query:  172 DTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKR 338
            D + GF R+EM  +K LAGTV  YD H+F+ +K  + WP  VE    G++   LP+   +ALK     I+  T+ L V E R+G+E  DG +L+FPQ +   G+ E++  + V+ +L        D  W +  +              ++L G H+FVC HG+RDKR
Sbjct:   15 DEKFGFKRSEMFKEK-LAGTVNAYDRHVFLCYKTPEAWPSRVE----GSESDPLPKLFASALKARKNDIAVKTL-LTVIEGREGTEFSDGDVLIFPQMIKYRGLKESDVDSFVDDVLV------NDKLWASGVQ--------------EALTGSHVFVCAHGSRDKR 155          
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|1079244259|ref|XP_018498019.1| (PREDICTED: altered inheritance of mitochondria protein 32-like isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 94.7449 bits (234), Expect = 5.890e-18
Identity = 60/167 (35.93%), Postives = 88/167 (52.69%), Query Frame = 0
Query:  172 DTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKR 338
            D + GF R+EM  +K LAGTV  YD H+F+ +K  + WP  VE    G++   LP+   +ALK     I+  T+ L V E R+G+E  DG +L+FPQ +   G+ E++  + V+ +L        D  W +  + A              L G H+FVC HG+RDKR
Sbjct:   15 DEKFGFKRSEMFKEK-LAGTVNAYDRHVFLCYKTPEAWPSRVE----GSESDPLPKLFASALKARKNDIAVKTL-LTVIEGREGTEFSDGDVLIFPQMIKYRGLKESDVDSFVDDVLV------NDKLWASGVQEA--------------LTGSHVFVCAHGSRDKR 155          
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|645248967|ref|XP_008230532.1| (PREDICTED: uncharacterized protein LOC103329796 [Prunus mume])

HSP 1 Score: 95.5153 bits (236), Expect = 1.528e-17
Identity = 62/177 (35.03%), Postives = 92/177 (51.98%), Query Frame = 0
Query:  162 SDENKSDPLTDTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKR 338
            SD+  + P  D ++GF R+EM   K LAGTV  YD H+F+ +K  + WP  VE    G++   LP+   +ALK     IS  T KL V E R+G+E  DG +L+FP+ +   G+ E++  + V+ +L        +  W +    A              L G H+FVC HG+RD+R
Sbjct:   66 SDDLSTLPAEDEKYGFQRSEMYETK-LAGTVDAYDRHVFLCYKTPEAWPSRVE----GSESDPLPKFFASALKARKNDISVKT-KLTVCEGREGTEFSDGDVLIFPEMIKYRGLKESDVDSFVDDVLV------NNKPWASGMHEA--------------LTGSHVFVCAHGSRDRR 216          
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|694411567|ref|XP_009334141.1| (PREDICTED: altered inheritance of mitochondria protein 32-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 93.9745 bits (232), Expect = 2.867e-17
Identity = 60/167 (35.93%), Postives = 88/167 (52.69%), Query Frame = 0
Query:  172 DTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKR 338
            D + GF R+EM  +K LAGTV  YD H+F+ +K  + WP  VE    G++   LP+   +ALK     I+  T+ L V E R+G+E  DG +L+FPQ +   G+ E++  + V+ +L        D  W +  + A              L G H+FVC HG+RDKR
Sbjct:   15 DEKFGFKRSEMFKEK-LAGTVNAYDRHVFLCYKTPEAWPSRVE----GSESDPLPKLFASALKARKNDIAVKTL-LTVIEGREGTEFSDGDVLIFPQMIKYRGLKESDVDSFVDDVLV------NDKLWASGVQEA--------------LTGSHVFVCAHGSRDKR 155          
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|694404532|ref|XP_009377142.1| (PREDICTED: uncharacterized protein LOC103965790 [Pyrus x bretschneideri])

HSP 1 Score: 94.7449 bits (234), Expect = 3.090e-17
Identity = 59/167 (35.33%), Postives = 87/167 (52.10%), Query Frame = 0
Query:  172 DTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKR 338
            D  +GF R+EM  +K LAGTV  YD H+F+ +K  + WP  VE    G++   LP+   +ALK     ++  T+ L V E R+G+E  DG +L+FPQ +   G+ E++  + V+ +L        D  W    + A              L G H+FVC HG+RDKR
Sbjct:   84 DETYGFKRSEMFKEK-LAGTVNAYDRHVFLCYKSPEAWPSRVE----GSESDPLPKFFASALKARKNDVAVKTL-LTVIEGREGTEFSDGDVLIFPQMIKYKGLKESDVDSFVDDVLV------SDKPWATGVQEA--------------LTGSHVFVCAHGSRDKR 224          
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|658012251|ref|XP_008341390.1| (PREDICTED: uncharacterized protein LOC103404273 [Malus domestica])

HSP 1 Score: 94.7449 bits (234), Expect = 3.198e-17
Identity = 60/167 (35.93%), Postives = 87/167 (52.10%), Query Frame = 0
Query:  172 DTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKR 338
            D  +GF R+EM  +K LAGTV  YD H+F+ +K  + WP  VE    G++   LP+   +ALK     I+  T+ L V E R+G+E  DG +L+FPQ +   G+ E++    V+ +L        D  W +  + A              L G H+FVC HG+RDKR
Sbjct:   85 DETYGFKRSEMFKEK-LAGTVNAYDRHVFLCYKSPEAWPSRVE----GSESDPLPKFFASALKARKNDIAVKTL-LTVIEGREGTEFSDGDVLIFPQMIKYKGLKESDVDNFVDDVLV------NDKPWASGVQEA--------------LTGSHVFVCAHGSRDKR 225          
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|719984431|ref|XP_010251074.1| (PREDICTED: uncharacterized protein LOC104593090 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 93.9745 bits (232), Expect = 3.863e-17
Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 0
Query:  151 QALGSEVKAGESDENKSDPLTDTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKR 338
             A  S+V+   +D   +D   D++ GF R EM  K  LAGTV+ YD H+F+ +K A+ WP  VE          LP+ L A LK     I  G  +L + E RDG+E  +G +L+FP+ +   G+T  +    VE +L       +   W +             GV+ ++L G H+FVCCHG+RD+R
Sbjct:   50 DASNSQVEGAVADSQDTD---DSKLGFKRPEM-YKSSLAGTVEPYDRHIFLCYKNAESWPSRVEDAQF----DRLPRLLAAVLKSRKNDIR-GQTRLALCEGRDGTESSNGDILIFPEMVRYRGLTHFDVDNFVEDVLV------KGTAWAS-------------GVS-EALTGYHVFVCCHGSRDRR 208          
BLAST of EWM22375.1 vs. NCBI_GenBank
Match: gi|1162533433|ref|XP_020415388.1| (uncharacterized protein LOC18784271 [Prunus persica] >gi|1139785870|gb|ONI19697.1| hypothetical protein PRUPE_3G292400 [Prunus persica])

HSP 1 Score: 93.9745 bits (232), Expect = 4.691e-17
Identity = 61/177 (34.46%), Postives = 92/177 (51.98%), Query Frame = 0
Query:  162 SDENKSDPLTDTEHGFARAEMGSKKCLAGTVKKYDTHMFVLWKRAQEWPKHVEAGAAGNDPPTLPQALHAALKDCAGSISCGTVKLNVAECRDGSEDKDGTLLLFPQELCVTGVTEANAKAVVEALLAGEVEEGEDGRWGNRTRVAAEKVGRLKGVAVKSLPGQHLFVCCHGNRDKR 338
            SD+  + P  D ++GF R+EM   K LAGTV  YD H+F+ +K  + WP  VE    G++   LP+   +ALK     I+  T KL V E R+G+E  DG +L+FP+ +   G+ E++  + V+ +L        +  W +    A              L G H+FVC HG+RD+R
Sbjct:   68 SDDLSTLPAEDEKYGFQRSEMYETK-LAGTVDAYDRHVFLCYKTPEAWPSRVE----GSESDPLPKFFASALKARKNDIAVKT-KLTVCEGREGTEFSDGDVLIFPEMIKYRGLKESDVDSFVDDVLV------NNKPWASGVHEA--------------LTGSHVFVCAHGSRDRR 218          
The following BLAST results are available for this feature:
BLAST of EWM22375.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102876|gb|EWM22375.1|0.000e+0100.00hypothetical protein Naga_100066g26 [Nannochlorops... [more]
gi|1079244263|ref|XP_018498021.1|9.706e-1935.33PREDICTED: altered inheritance of mitochondria pro... [more]
gi|1079244261|ref|XP_018498020.1|1.427e-1835.33PREDICTED: altered inheritance of mitochondria pro... [more]
gi|1079244259|ref|XP_018498019.1|5.890e-1835.93PREDICTED: altered inheritance of mitochondria pro... [more]
gi|645248967|ref|XP_008230532.1|1.528e-1735.03PREDICTED: uncharacterized protein LOC103329796 [P... [more]
gi|694411567|ref|XP_009334141.1|2.867e-1735.93PREDICTED: altered inheritance of mitochondria pro... [more]
gi|694404532|ref|XP_009377142.1|3.090e-1735.33PREDICTED: uncharacterized protein LOC103965790 [P... [more]
gi|658012251|ref|XP_008341390.1|3.198e-1735.93PREDICTED: uncharacterized protein LOC103404273 [M... [more]
gi|719984431|ref|XP_010251074.1|3.863e-1734.57PREDICTED: uncharacterized protein LOC104593090 is... [more]
gi|1162533433|ref|XP_020415388.1|4.691e-1734.46uncharacterized protein LOC18784271 [Prunus persic... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8337rna8337Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications