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Properties
Property Name | Value |
Product | CCT domain protein |
Orig transcript id | gnl|cribi|Naga_100066g21.10337.mrna |
Orig protein id | gnl|cribi|Naga_100066g21.10337 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037248.1 | supercontig | KK037248.1:401807..405405 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8334 ID=rna8334|Name=rna8334|organism=Nannochloropsis gaditana|type=mRNA|length=840bp TTTGTCTCCGTCCCTTGTCTGAGCAGACTCCCTCCCTCTCCACTCCCTTT CAGGCGGATGCAACTACGCGACTTGCTTTGTCTGTGGCAAGCGGGGCCAC CTTTCTTCCCAGTGCGAGAGGAACGAAAAGGGCCTGTATCCCAAAGGGGG AGGGTGCCATCGGTGCGGGGAGAAGGACCATTTTGCCGCCCGGTGCCCCA CCAGGGAAGGAGGAAAGGAAACGGGGACGGAGGAGGATGGTGAGAGGGAA AGGCAGGGGGGGCAGGAAGGGGCAGACGAAGCTGCAGTCAAAGAGAAGGA GTACGGTGGCACCGATCCTTCAATTTTTAAGGCACGATATGTGAAAGAGA AGCGGCCCTGGCAGGAGTCGATGACACAAGAGATCGTCTTTGATGAACAG AGCTCACAAGGGGCCAAGGGCGTCTATGCAACGAACACAAATGCTGCCGC TAGGACATTAGGGGGGGACGACCTTCATGAGCACGATTTCCTCTTGGAAT CGCTCGACGATGAAGATGAGGAAGGACTCGACTCTCTGCGGGGCGAAGCT GTTCGCAAGGCCGGAATGAGCGGAGGGAGGGGGAGAGGACGTGGCCGAGG AAGGGGGGCTCGTGATTCCGGTAGGTATGGGCGTATGCGCAATAGTCACG CTCCTTTGCAAGGCCCCACGAGTTCTAGGTCACCCGTGGAAGATAGGAAG AAAGCGAACAAGACCAAACCGAAGACGGTTGTTTTCTAATGCTCTGTGGC CTCGGAAAATTTCCCTGCATACTAAGCTCGTTTGCATGCACACCCAAACG ATGAATAAAATTGTTTCACTGAATCAATCAGAGTTATCTG back to topprotein sequence of rna8334 >rna8334-protein ID=rna8334-protein|Name=rna8334|organism=Nannochloropsis gaditana|type=polypeptide|length=580bp MILASPAPAATPAAEKAAGAALTRDSSTTVPKAPVAGSSDAQNAPIPAAA TPWEVKSVQEWGGLSDTSSNSTSAGSSVAGSVGSVGNSPRPHPPVDEEDL ACASDLEMAAAVVLSPPTPGQPSLAPSAAPPGPVSAPAACTVKREASEEM ETEDAEAASILSKVLPDMHKLTTTFADARGSIPKKASVQGHGGGSDRAAS IGTSREAIGDAGRGSSPGSRRGGAKGYEDLLDCLASLASNRPPVVPAHCR ASRMSVDDMDLEQHCRRPNKGSRGPSPFSPSLLAAARGMEDSDEEEEEDG EEAGRYYYATGGAGLGGGGLDGMEVGRGRRPRAASNPEGCDTWRRYGTSG VPVAMDRKGLAKGQPTHASGAAVHDKAGPAAGGSMITFHGGLASTADSLA SEGHAAASTLQAGARAAAAASAAASAAAAEAGAGSGAGSILPHMLAKYSD VYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRVR VKGRFVKLPPKEAGEEEGGGGMSWSPSGQALAVIQEGVAETAKSVVDGEE EEEEGEEEEESEEMEKEGPVCRMRRHSICF back to topmRNA from alignment at KK037248.1:401807..405405+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8334 ID=rna8334|Name=rna8334|organism=Nannochloropsis gaditana|type=mRNA|length=3599bp|location=Sequence derived from alignment at KK037248.1:401807..405405+ (Nannochloropsis gaditana) GCATGTCCCGGCGTGAAATGTTTGCTGAGCCCTGGAATGTGCATGTGAAG
GGTATTATAGCTCGGAAGGATGGTTATACTTGTCCCTTAACGTATTTTTT
ATCTTTTATGCCAAGACCAAGCAGACATCACGCCCAGAGCGGTCACCTGC
GGTTGGAGTGAAACGCGCTGTGGTGCTAGCGCGGACCGTCCGTGCTATAC
GACCGCATTCCGACCTTAAATTACCACACATAGGTAGTTAATCACATCCT
CAACATCTTCTCTATGATTTTGGCATCACCTGCTCCGGCCGCGACCCCAG
CGGCAGAAAAAGCAGCGGGCGCAGCACTCACGAGGGACAGCTCAACGACG
GTACCTAAAGCGCCTGTAGCGGGGTCATCTGATGCTCAAAACGCTCCCAT
TCCAGCCGCTGCGACACCTTGGGAAGTGAAATCGGTTCAAGAATGGTACG
TAAATACTCAAGTAGGAGAGGACAGGAGAACTGGCTGTGGATACCCACGT
CACTCGGGGTTGTGAAGGAGAACGCGTGTCAcatcggagggaggagattc
CCTCTGTGCTGGAAAGGGTGTTTCCCACCCCTTGTGGGGCCTCACGAGAG
GGCACGTCGTTCGCCACTCTTGAGTGGCAATTTAGGATCGGAAGAAGGGC
CTTGAAAATAAATTGCCATCAACTTTGCTCGGAAAGCACTTTCCTTCGTA
CGCTCAGCCCCGACATGCACcgactttctttccttctcccagggGAGGCT
TAAGTGATACATCCAGCAATTCCACGTCAGCAGGGAGCTCCGTAGCAGGC
AGCGTGGGAAGTGTGGGGAACAGCCCACGCCCGCACCCACCcgtcgacga
ggaggacctggCGTGCGCGTCTGATCTCGAGATGGCTGCGGCCgttgtcc
tctctcccccaaCCCCCGGACAGCCCTCTCTTGCACCTTCTGCGgctccc
cctggccctgtctctgcccccgccgcgTGTACCGTCAAACGTGAGGCgtc
ggaggagatggaaaccgaggatgcggaggcggcgagCATCCTGTCCAAGG
TGCTGCCGGACATGCACAAACTGACCACCACCTTTGCGGACGCGCGCGGG
AGCATCCCCAAGAAAGCGTCAGTGCAGGGACacggcggaggcagcgacCG
TGCGGCCTCCATTGGAACCTCCCGCGAGGCCATCGGCGATGCAGGCAGGG
GTTCGTCCCCCGGGAGCCGCAGGGGGGGCGCCAAGGGCTACGAGGACCTG
TTGGATTGCCTGGCCTCCTTGGCGTCCAATCGCCCCCCTGTGGTGCCTGC
GCACTGCCGGGCGTCTCGCATGTCGGTAGACGACATGGATTTGGAGCAGC
ATTGCCGTCGGCCAAACAAGGGCAGCCGGGGCCCgagccctttctccccc
tctttgctggcggcggcgagggggatggaggactcggacgaggaggagga
ggaggacggggaggaagcagggcggTATTACTATGCAAcgggcggggcag
gcctgggcgggggggggctggacgGCATGGAAGTGGGCCGGGGCCGGCGT
CCCCGCGCCGCTTCGAACCCCGAGGGTTGTGACACTTGGCGCCGGTACGG
GACCTCGGGAGTCCCCGTGGCGATGGACAGGAAAGGCCTCGCCAAGGGTC
AGCCCACGCATGCATCAGGAGCCGCGGTCCACGACAAGGCGGGCCCTGCC
GCGGGCGGTAGCATGATTACCTTCCACGGCGGCCTCGCGAGCACTGCGGA
TAGCTTAGCGTCAGAGGGCCATGCGGCTGCTTCGACCCTGCAGGCCGGTG
CTAGAGCGGCCGCCGCGGCGTCCGCTGCTGCCAGTGCTGCCGCTGCAGAA
GCTGGGGCGGGGTCGGGTGCCGGGAGTATTCTGCCGCACATGTTGGCCAA
GTACTCGGACGTTTACAACAAGCACGGACGGATCGGGATCTACACACGGG
TacgtggaggggcggagCGACGCGACCATGTgggaacgggggggagggag
tcgtTTTTTGTAGGGCGGTCCGACCTCGGGTGGGGCGTCGGTCTCCCGGG
CCTTGTGGTCTTCTTCTCACCCCGGCTTCCCTTTCAACTGGTTTAGGACG
AGCGGGATGCCATCATTGCTCGTTTTCGTGAAAAGCGCCAACGGCGcgtg
tggaagaagaagatccGCTACTCGTGCCGCAAGAACTTGGCGGACAAGCG
GGTGCGTGTGAAGGGACGCTTTGTCAAGCTGCCGCCcaaggaggccgggg
aggaggaggggggggggggcatgtccTGGTCGCCCTCGggccaggcgctg
gccgTGATCCAGGAGGGCGTTGCGGAAACGGCAAAAAGCGTcgtggatgg
ggaggaagaggaggaagagggggaagaggaggaggagtccgaggagatgg
agaaggagggccccGTCTGTCGCATGCGACGACACAGCATCTGCTTCTAA
CGTTTGGATGTCAAGATGGTAGCTTTTGTAGATAGAAGGGTGTTGCAGCA
CCTTCGAAAGATGCGCTTATGTGTACAGTTGTTTTTCATTGTATGGCTCA
ATTGATTGTAGTTTTGAGTAGAATCACTGAAGTATAATGCGGAGAGCAGA
GAAGACGTGTGAAACCCGGCCCATATGTCTCTTAAAAGAGGAAAGCAGCG
ATCTGATTGAGAGGTTGGTGACAGTGACTTGCATCACACGCATCACTTAT
TTGTCTGAGCAAGAAAGCGCCCATTCATGATATGGCTTGTGGAAAGGTGA
ATGTTGTTCTTAttgagagcgaggagaagagtcCAGTGCGAGGAGTGGTG
TGGCCTTTGTCCTCCACGGCAGTGTCAACAGCTCCACGGCCGGGATCGAC
TACGATGGCGTaacaggaggagaaaggaaaactGCGAAGGCGAAAGAAGG
AGTGCGATCGGGGCAGCACCAGCTGTGAATCTTGAGTGTAATGCTTGACA
TGTGAAGCGAGAGGTTACGAGTAATGTGCCACGTGTCAGAGAAagtgagg
gaaaaaggaCCGGATGATGCTCCCAGGAGAAGGATGGCTGAGCCGAAACA
AGCTGAGACCTGTGCTGTACAGCTCAAAATTGAAATGAAAAAAACGTTGC
GCATggtcggagggggaaaataaGTGAGGTGCAAAACCAGAGAGGAGAAT
AGAAGAGGGATAACCGCCGTAAAAAGAGAACCATTTATGGACATGCGCAC
ACACATGCGTCTTCTTGGCCATGACGCAACGTGTGCGTGGTATCTGATGC
CTGCAGGACAAGTTGCCCCTTTTGAGAAGCTGAACATCAAGGAGCGGGGT
ACAAATGGGGAATATGAGGGACTATCCACGCATTGCGTGAGGGCGAGACG
GAATGTGTGCGTCCCCTCCACCATTACAGGCTGtcagaagaggaaaacgg
aTTTAGCTCGTCATGTCTGTTGTGTTTATTTTGGGTGTAAGAGTCAAGAT
AATTGAGTCAGCAAGGCGTCAGGCTTCCACTGCAGTGTCCGTTGGGATGC
ACCAAAATAATTTAGTGTCATGAAAGTGTGATTGATGCCTCTCTGAGAGG
ATTTAAAGAGAAGCGTTGCTTTGAAGAAGATGGCCTTATCCAGATGAAC back to topCoding sequence (CDS) from alignment at KK037248.1:401807..405405+ >rna8334 ID=rna8334|Name=rna8334|organism=Nannochloropsis gaditana|type=CDS|length=5229bp|location=Sequence derived from alignment at KK037248.1:401807..405405+ (Nannochloropsis gaditana) ATGATTTTGGCATCACCTGCTCCGGCCGCGACCCCAGCGGCAGAAAAAGC AGCGGGCGCAGCACTCACGAGGGACAGCTCAACGACGGTACCTAAAGCGC CTGTAGCGGGGTCATCTGATGCTCAAAACGCTCCCATTCCAGCCGCTGCG ACACCTTGGGAAGTGAAATCGGTTCAAGAATGggGAGGCTTAAGTGATAC ATCCAGCAATTCCACGTCAGCAGGGAGCTCCGTAGCAGGCAGCGTGGGAA GTGTGGGGAACAGCCCACGCCCGCACCCACCcgtcgacgaggaggacctg gCGTGCGCGTCTGATCTCGAGATGGCTGCGGCCgttgtcctctctccccc aaCCCCCGGACAGCCCTCTCTTGCACCTTCTGCGgctccccctggccctg tctctgcccccgccgcgTGTACCGTCAAACGTGAGGCgtcggaggagatg gaaaccgaggatgcggaggcggcgagCATCCTGTCCAAGGTGCTGCCGGA CATGCACAAACTGACCACCACCTTTGCGGACGCGCGCGGGAGCATCCCCA AGAAAGCGTCAGTGCAGGGACacggcggaggcagcgacCGTGCGGCCTCC ATTGGAACCTCCCGCGAGGCCATCGGCGATGCAGGCAGGGGTTCGTCCCC CGGGAGCCGCAGGGGGGGCGCCAAGGGCTACGAGGACCTGTTGGATTGCC TGGCCTCCTTGGCGTCCAATCGCCCCCCTGTGGTGCCTGCGCACTGCCGG GCGTCTCGCATGTCGGTAGACGACATGGATTTGGAGCAGCATTGCCGTCG GCCAAACAAGGGCAGCCGGGGCCCgagccctttctccccctctttgctgg cggcggcgagggggatggaggactcggacgaggaggaggaggaggacggg gaggaagcagggcggTATTACTATGCAAcgggcggggcaggcctgggcgg gggggggctggacgGCATGGAAGTGGGCCGGGGCCGGCGTCCCCGCGCCG CTTCGAACCCCGAGGGTTGTGACACTTGGCGCCGGTACGGGACCTCGGGA GTCCCCGTGGCGATGGACAGGAAAGGCCTCGCCAAGGGTCAGCCCACGCA TGCATCAGGAGCCGCGGTCCACGACAAGGCGGGCCCTGCCGCGGGCGGTA GCATGATTACCTTCCACGGCGGCCTCGCGAGCACTGCGGATAGCTTAGCG TCAGAGGGCCATGCGGCTGCTTCGACCCTGCAGGCCGGTGCTAGAGCGGC CGCCGCGGCGTCCGCTGCTGCCAGTGCTGCCGCTGCAGAAGCTGGGGCGG GGTCGGGTGCCGGGAGTATTCTGCCGCACATGTTGGCCAAGTACTCGGAC GTTTACAACAAGCACGGACGGATCGGGATCTACACACGGGACGAGCGGGA TGCCATCATTGCTCGTTTTCGTGAAAAGCGCCAACGGCGcgtgtggaaga agaagatccGCTACTCGTGCCGCAAGAACTTGGCGGACAAGCGGGTGCGT GTGAAGGGACGCTTTGTCAAGCTGCCGCCcaaggaggccggggaggagga ggggggggggggcatgtccTGGTCGCCCTCGggccaggcgctggccgTGA TCCAGGAGGGCGTTGCGGAAACGGCAAAAAGCGTcgtggatggggaggaa gaggaggaagagggggaagaggaggaggagtccgaggagatggagaagga gggccccGTCTGTCGCATGCGACGACACAGCATCTGCTTCTAAATGATTT TGGCATCACCTGCTCCGGCCGCGACCCCAGCGGCAGAAAAAGCAGCGGGC GCAGCACTCACGAGGGACAGCTCAACGACGGTACCTAAAGCGCCTGTAGC GGGGTCATCTGATGCTCAAAACGCTCCCATTCCAGCCGCTGCGACACCTT GGGAAGTGAAATCGGTTCAAGAATGggGAGGCTTAAGTGATACATCCAGC AATTCCACGTCAGCAGGGAGCTCCGTAGCAGGCAGCGTGGGAAGTGTGGG GAACAGCCCACGCCCGCACCCACCcgtcgacgaggaggacctggCGTGCG CGTCTGATCTCGAGATGGCTGCGGCCgttgtcctctctcccccaaCCCCC GGACAGCCCTCTCTTGCACCTTCTGCGgctccccctggccctgtctctgc ccccgccgcgTGTACCGTCAAACGTGAGGCgtcggaggagatggaaaccg aggatgcggaggcggcgagCATCCTGTCCAAGGTGCTGCCGGACATGCAC AAACTGACCACCACCTTTGCGGACGCGCGCGGGAGCATCCCCAAGAAAGC GTCAGTGCAGGGACacggcggaggcagcgacCGTGCGGCCTCCATTGGAA CCTCCCGCGAGGCCATCGGCGATGCAGGCAGGGGTTCGTCCCCCGGGAGC CGCAGGGGGGGCGCCAAGGGCTACGAGGACCTGTTGGATTGCCTGGCCTC CTTGGCGTCCAATCGCCCCCCTGTGGTGCCTGCGCACTGCCGGGCGTCTC GCATGTCGGTAGACGACATGGATTTGGAGCAGCATTGCCGTCGGCCAAAC AAGGGCAGCCGGGGCCCgagccctttctccccctctttgctggcggcggc gagggggatggaggactcggacgaggaggaggaggaggacggggaggaag cagggcggTATTACTATGCAAcgggcggggcaggcctgggcggggggggg ctggacgGCATGGAAGTGGGCCGGGGCCGGCGTCCCCGCGCCGCTTCGAA CCCCGAGGGTTGTGACACTTGGCGCCGGTACGGGACCTCGGGAGTCCCCG TGGCGATGGACAGGAAAGGCCTCGCCAAGGGTCAGCCCACGCATGCATCA GGAGCCGCGGTCCACGACAAGGCGGGCCCTGCCGCGGGCGGTAGCATGAT TACCTTCCACGGCGGCCTCGCGAGCACTGCGGATAGCTTAGCGTCAGAGG GCCATGCGGCTGCTTCGACCCTGCAGGCCGGTGCTAGAGCGGCCGCCGCG GCGTCCGCTGCTGCCAGTGCTGCCGCTGCAGAAGCTGGGGCGGGGTCGGG TGCCGGGAGTATTCTGCCGCACATGTTGGCCAAGTACTCGGACGTTTACA ACAAGCACGGACGGATCGGGATCTACACACGGGACGAGCGGGATGCCATC ATTGCTCGTTTTCGTGAAAAGCGCCAACGGCGcgtgtggaagaagaagat ccGCTACTCGTGCCGCAAGAACTTGGCGGACAAGCGGGTGCGTGTGAAGG GACGCTTTGTCAAGCTGCCGCCcaaggaggccggggaggaggaggggggg gggggcatgtccTGGTCGCCCTCGggccaggcgctggccgTGATCCAGGA GGGCGTTGCGGAAACGGCAAAAAGCGTcgtggatggggaggaagaggagg aagagggggaagaggaggaggagtccgaggagatggagaaggagggcccc GTCTGTCGCATGCGACGACACAGCATCTGCTTCTAAATGATTTTGGCATC ACCTGCTCCGGCCGCGACCCCAGCGGCAGAAAAAGCAGCGGGCGCAGCAC TCACGAGGGACAGCTCAACGACGGTACCTAAAGCGCCTGTAGCGGGGTCA TCTGATGCTCAAAACGCTCCCATTCCAGCCGCTGCGACACCTTGGGAAGT GAAATCGGTTCAAGAATGggGAGGCTTAAGTGATACATCCAGCAATTCCA CGTCAGCAGGGAGCTCCGTAGCAGGCAGCGTGGGAAGTGTGGGGAACAGC CCACGCCCGCACCCACCcgtcgacgaggaggacctggCGTGCGCGTCTGA TCTCGAGATGGCTGCGGCCgttgtcctctctcccccaaCCCCCGGACAGC CCTCTCTTGCACCTTCTGCGgctccccctggccctgtctctgcccccgcc gcgTGTACCGTCAAACGTGAGGCgtcggaggagatggaaaccgaggatgc ggaggcggcgagCATCCTGTCCAAGGTGCTGCCGGACATGCACAAACTGA CCACCACCTTTGCGGACGCGCGCGGGAGCATCCCCAAGAAAGCGTCAGTG CAGGGACacggcggaggcagcgacCGTGCGGCCTCCATTGGAACCTCCCG CGAGGCCATCGGCGATGCAGGCAGGGGTTCGTCCCCCGGGAGCCGCAGGG GGGGCGCCAAGGGCTACGAGGACCTGTTGGATTGCCTGGCCTCCTTGGCG TCCAATCGCCCCCCTGTGGTGCCTGCGCACTGCCGGGCGTCTCGCATGTC GGTAGACGACATGGATTTGGAGCAGCATTGCCGTCGGCCAAACAAGGGCA GCCGGGGCCCgagccctttctccccctctttgctggcggcggcgaggggg atggaggactcggacgaggaggaggaggaggacggggaggaagcagggcg gTATTACTATGCAAcgggcggggcaggcctgggcgggggggggctggacg GCATGGAAGTGGGCCGGGGCCGGCGTCCCCGCGCCGCTTCGAACCCCGAG GGTTGTGACACTTGGCGCCGGTACGGGACCTCGGGAGTCCCCGTGGCGAT GGACAGGAAAGGCCTCGCCAAGGGTCAGCCCACGCATGCATCAGGAGCCG CGGTCCACGACAAGGCGGGCCCTGCCGCGGGCGGTAGCATGATTACCTTC CACGGCGGCCTCGCGAGCACTGCGGATAGCTTAGCGTCAGAGGGCCATGC GGCTGCTTCGACCCTGCAGGCCGGTGCTAGAGCGGCCGCCGCGGCGTCCG CTGCTGCCAGTGCTGCCGCTGCAGAAGCTGGGGCGGGGTCGGGTGCCGGG AGTATTCTGCCGCACATGTTGGCCAAGTACTCGGACGTTTACAACAAGCA CGGACGGATCGGGATCTACACACGGGACGAGCGGGATGCCATCATTGCTC GTTTTCGTGAAAAGCGCCAACGGCGcgtgtggaagaagaagatccGCTAC TCGTGCCGCAAGAACTTGGCGGACAAGCGGGTGCGTGTGAAGGGACGCTT TGTCAAGCTGCCGCCcaaggaggccggggaggaggaggggggggggggca tgtccTGGTCGCCCTCGggccaggcgctggccgTGATCCAGGAGGGCGTT GCGGAAACGGCAAAAAGCGTcgtggatggggaggaagaggaggaagaggg ggaagaggaggaggagtccgaggagatggagaaggagggccccGTCTGTC GCATGCGACGACACAGCATCTGCTTCTAA back to top
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