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Properties
| Property Name | Value |
|---|
| Product | rho gtpase-activating protein 39 |
| Orig transcript id | gnl|cribi|Naga_100066g14.10341.mrna |
| Orig protein id | gnl|cribi|Naga_100066g14.10341 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:382487..386008 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8327 ID=rna8327|Name=rna8327|organism=Nannochloropsis gaditana|type=mRNA|length=1692bp
ATGTATTTGTTTTCAAATAGAGAAGAATCACGCTCTCATGAATGCATTTT
GGAGAGAATGCCCCGAATGCTTGAGTACTCACCGGACCAGGGCTGCAGCA
GTGCCACGGCCCTGCAACGTAGGAAGCACCCCCAGCGGGATCTTCCCAAT
GACCACATGTTTGCAAACGCGGTGGACATACATGCACAATGCAAGCGGCG
AGCTACAACGCTCTGTATCTCTTCGAATACAGCGCCAAAGCCCTATTCGG
CGTTCGCTGTCAGTCTCGTCGCAGGCGGCGGAGCAGGCGTCATTGAAACC
ATCCTAACGTATCCCTTAGACCTTGTGCGAACGCGTTTGCAAATGCTGCA
AGATACCACGGGCAACGGTGCCGATTTGATTCCTAGCAAGTTTCCTTGTC
GGAGGCATTCACCTGGCATCATGAGACTCTTAGCATCAATTGCTCAAGAG
GAAGGGTTTCTCCGGCTCTATCGAGGTCTTCTACCTCCCCTGATCTCTGA
AGTACCACGTCGCGCCCTCAAATTCAGCGCGAACGAGTTCTACACGCATC
AAGGGCGTGCATTTCTGAAACGATGGTCAGGCGTTTCCTCCCCTTCCTTC
CCCGTCCTACTCGCTGCAGTGGCTGGCACCATGACCGGACTCACGGAAAC
GCTCCTTCACACGCCCTTTGAGCTCCTTAAGACCCGCCTCCAGTCCCTAG
AATTCCAGCACTGCCGCGACGCCCACGCGTGTGCCCAGGAGGTCTGGGCC
CAAGGCGGGAGGGCGCAGGGAGGCTGGAGGAGGCTGGCTGCCTTCTATCA
AGGCTGGGAGGCCTATTTGTGGCGGCAGGGGGTCTGGAACGGCGTCTTCT
TCACGAGCATCGCCGCCATCCGCACGCACGCCCCATTGGCCTCATTTCTC
CCAGCTTCATCAGCCCCGACAACTTCTCCTCGTTCCACTGCCTCAGTCCA
ATGTTCCTCATCGTCTCCGTCTTCGTGCCCTGCCCCTTCGCTTAACTTCT
CGCTGCTTCCCTCTCCTCCCACCTCCTCCTCTTCCTTCGCCTTCCCCCTC
GTCTTCCTGAGCACGCCCCGCGTCTACGATTTCGTCACGGGCCTCCTCGC
CGGCACATTGGCCACGCTGCTCAACACCCCCTTCGATGTCTGCAAAACGA
GGTTGCAGTGCGTCACCTATGGCAGGACGGGAGGATTTGGGGGAAGGGAC
GGGGGGGCATCCCTACCTTGGGTCCTGCCCTATCTGAGAGAGATATGCAA
GAAGGAGGGGCTCCGAGGATGCTTTAGGGGCCTGAATGCACGTCTATACA
GGGCAGCCCCTGGAAGCGGGATCTTACTGGTCGCCTACGAGGGTATTGCC
AAGCTGATGAGGTTGGAGGAACCAATGTAATGGGAAGCTGGTGGGCTTGG
CGGCGAGGTAGTGTTATGTAGATCAGTCTGTTTGGTGGTGAGAGTGGGTG
TATCATCAAGATCGTATTGCCCTCGTCTGCAGTGTACAATTCCGATGGGG
AGATGATAGTTGCTGCCATGATAATTTTTGTCATAAACGTAGTGTGTAGA
TGTAAAAAAGCCCGCGTTGAGGCAAAGAAAAGCAGACATTGCGAAAAAGC
AATAGAGCCATCGAGAAAGATGCTCGTTGTGGCCGATTTATAGGTCGGTT
AATTGGATGTTTTTGGGCGATCACCACGCGTCCTCAGTGAAG back to topprotein sequence of rna8327 >rna8327-protein ID=rna8327-protein|Name=rna8327|organism=Nannochloropsis gaditana|type=polypeptide|length=1040bp
MQAASPEHIYDDILYVEEDAEQSVELSQEARCRVKEGKDGEDSEDGSSDG
YLEEEEEEGEEENDLRGTFEDNFDAFVDDWGEEDEFTCAWDRSRSNEASE
ARGNEAAELRQLSLEVSNTGVKLDGNTTLDTLAVTAGRRRSTLYHTFTQS
LLMEAKLHQQQRDNFQRGRLRHAVYVLQRGFSLKKKAEHEKSYKERFLFL
SDDLRSLRLAKSGQTRHKAKHIAQLRDGLQMVRAGPTLRHRRDAEQLNFH
STTFTLHVRKGKEGSFSHLGHGGLTGTTPPGPEKVIDIWCSSESHCEEWL
KCLPLIVNATVCPEHGPRELIWSEPVGQGAGMEAGGWVEGPRPYLEGLAE
ELARSSIVYYMDVQQRRLRRRTLRQSAQGRDIGAAVAAAMAVHGGDKSKT
PHQRSTDNSSGSQASSNTTAGKGEGQGNHNGSHLQNAMKKMHIEHFLSKA
REGHGGGSPSGPGLEPVHPATTAASAAASAAVLLLRPRSLNELLSFHASP
TKRPFHAYLREEGAAAALKAFRLIMVYMGDLDAVVQEEEQEPGEEGHLWK
SPRPHRPAGGSCTSQNNGSDRLRHHSFSSTASISWPFPGGQTQAPRPFSS
PSPSESPQSSFSCSSPASKAGEADGEAQHALLLHLCALGQAPSREPGACL
KPHAWMHDLRNELYVAALAQTIQNPDPASCLRGWRLLVAFAHSFMPTDDD
LRECLIWHADRACHQYAAPPPLPPASGGGRGSEGGRESKEMRTGGRGLDA
SGLAYHAYTVFVNTERDLQQPPGRDCASGREGRAAPVGLTVAELDRIQAL
VIPPTVFDCSLEEVLRKELVVVRGGGGGGGGGLPSSEMLLENGNVPLIVQ
VLIRKFQELEGYEVEGIFRRAAVTERVLAVKQGLEDGSYVVYGTEAVDTT
DPMVVADLLKAWLRHLREPLVPLQHYRRALDAGQAQDLAPTLAFLDTVLP
KANAATLVYLIHFLNHCAELSQFNQMTPRNLAIVFSPNLLRHPSNDPMLM
VQNAENERKFVIQLMRALVSPAEPSPTTASPSVPPLVSSR back to topmRNA from alignment at KK037248.1:382487..386008- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8327 ID=rna8327|Name=rna8327|organism=Nannochloropsis gaditana|type=mRNA|length=3522bp|location=Sequence derived from alignment at KK037248.1:382487..386008- (Nannochloropsis gaditana)
AGACACACTGAGGCAATAGGTCTGTCTGGGGCGCCAACGTGTGCCATTAG
AAGCAAGTGGGTTCACCCTCTCGTTCTTCCGGCCCATATTGCCTAGACTC
GCCTAGGGGTACTCTTAAACGCTTCGACAGCCGACGCTGTCGATCGCCAC
TGCCATTATGCAGGCAGCATCGCCAGAGCACATTTACGACGATATACTGT
ACGTGGAAGAGGATGCAGAGCAAAGCGTGGAGCTATCACAGGAAGCGAGA
TGCCGGGTTAAGGAGGGCAAAGACGGGGAGGACAGCGAAGACGGTAGCAG
TGATGGCTATCTTGAAGAGGAGGAGGAGGAGGGAGAGGAGGAAAACGATT
TGAGAGGAACGTTTGAGGACAATTTTGATGCTTTTGTCGATGATTGGGGC
GAGGAAGATGAATTCACCTGTGCGTGGGACCGCAGTCGAAGCAACGAGGC
TAGTGAGGCGAGAGGAAACGAGGCGGCCGAGCTCCGGCAATTAAGTCTGG
AGGTGTCCAACACTGGGGTCAAATTAGACGGAAATACGACTCTGGATACA
CTCGCGGTAACGGCCGGCCGCAGACGGAGCACTCTTTACCACACCTTCAC
GCAAAGCCTGTTAATGGAGGCCAAGCTCCACCAGCAGCAGCGCGACAACT
TCCAGAGGGGACGCCTGCGGCACGCAGTCTACGTCCTTCAGCGCGGATTC
AGCCTCAAGAAGAAGGCGGAGCATGAGAAATCGTACAAGGAGCGGTTTCT
CTTCCTAAGCGACGATCTGAGGTCCCTGCGTCTGGCCAAATCGGGCCAAA
CCCGGCATAAAGCCAAGCACATCGCTCAGCTCCGAGACGGCCTTCAGATG
GTGAGGGCGGGGCCCACCCTTCGACATCGACGGGACGCGGAGCAACTCAA
CTTTCACTCGACCACTTTCACCCTGCACGTGCGCAAGGGGAAGGAGGGTA
GTTTCAGCCACCTGGGCCACGGGGGTCTGACGGGAACGACCCCCCCGGGC
CCGGAGAAAGTGATCGACATCTGGTGCTCCTCGGAGAGCCACTGCGAGGA
ATGGTTGAAGTGCTTGCCACTGATCGTGAATGCCACGGTCTGCCCCGAGC
ACGGGCCCCGGGAGTTGATCTGGAGCGAGCCCGTGGGGCAGGGGGCCGGG
ATGGAGGCAGGAGGGTGGGTGGAGGGCCCGCGGCCCTACTTGGAGGGGCT
GGCTGAGGAATTAGCGCGTTCCTCCATCGTCTACTACATGGACGTGCAGC
AGAGACGGCTGCGGCGCCGGACGTTGCGACAGAGCGCGCAAGGTCGAGAT
ATAGGCGCGGCGGTGGCGGCTGCCATGGCGGTGCATGGCGGGGACAAAAG
TAAGACTCCCCATCAACGGAGCACAGATAATTCTAGCGGCAGCCAAGCCA
GCAGCAACACCACCGCAGGCAAAGGGGAGGGCCAGGGGAACCACAACGGA
AGCCACCTGCAGAACGCGATGAAGAAGATGCACATCGAGCATTTCTTGTC
CAAGGCCAGGGAGGGCCATGGGGGGGGAAGCCCCTCCGGGCCGGGACTTG
AACCCGTGCACCCGGCAACCACAGCCGCCAGCGCTGCCGCCAGCGCGGCC
GTGCTCCTTCTCCGGCCACGTTCGTTGAACGAGCTTCTGAGCTTTCACGC
GTCCCCGACCAAGCGTCCTTTCCATGCTTACCTTCGCGAGGAGGGGGCGG
CCGCGGCCCTCAAGGCGTTTCGGCTCATCATGGTCTACATGGGCGACCTG
GACGCGGTGGTGCAAGAAGAGGAGCAGGAACCGGGGGAGGAAGGACACCT
CTGGAAGTCCCCACGCCCACACCGTCCGGCAGGAGGGAGCTGTACCAGCC
AAAACAACGGCTCGGATCGGCTCCGTCACCATTCCTTCTCCAGCACCGCG
AGCATCTCCTGGCCCTTTCCCGGCGGTCAAACGCAGGCACCGCGTCCTTT
TTCGTCTCCATCGCCCTCCGAGTCCCCTCAATCCTCCTTCTCCTGCTCGT
CCCCCGCCAGCAAGGCCGGCGAGGCCGATGGCGAGGCCCAGCACGCCCTC
CTCCTCCACCTCTGTGCCCTCGGCCAGGCCCCCAGCCGGGAGCCCGGCGC
CTGCCTCAAACCGCACGCGTGGATGCACGACTTGCGCAACGAGCTGTACG
TGGCCGCGCTCGCCCAGACGATTCAGAACCCGGACCCTGCTTCCTGTTTG
CGCGGCTGGCGCCTGCTGGTCGCTTTCGCGCATTCGTTCATGCCGACGGA
CGATGACCTCCGCGAGTGCCTCATCTGGCACGCGGACCGGGCCTGCCACC
AGTACGCCGCCCCTCCGCCCTTGCCTCCGGCCTCGGGGGGGGGCAGGGGA
AGCGAAGGAGGGAGGGAGAGCAAGGAGATGAGGACCGGGGGCCGGGGCCT
TGATGCCAGCGGCTTGGCCTACCACGCCTACACCGTCTTCGTGAACACAG
AGCGGGATCTTCAGCAGCCACCAGGTCGGGATTGCGCAAGCGGAAGGGAG
GGAAGGGCCGCCCCGGTGGGCCTGACCGTCGCGGAGTTGGACCGTATCCA
AGCCTTGGTCATCCCGCCCACGGTCTTCGACTGCTCCTTGGAAGAGGTCC
TGCGGAAGGAGCTGGTCGTTGTCCGAGGGGGCGGAGGAGGGGGGGGCGGA
GGCCTCCCATCGAGCGAGATGCTCCTGGAGAATGGGAACGTGCCGTTGAT
CGTCCAAGTCCTGATCCGAAAATTCCAAGAGCTGGAGGGCTACGAGGTGG
AAGGCATCTTCCGTCGCGCTGCCGTCACGGAGCGCGTGCTCGCAGTCAAG
CAGGGCCTGGAGGACGGGAGCTACGTGGTGTACGGGACCGAGGCCGTGGA
CACGACGGACCCGATGGTGGTGGCCGACCTGCTCAAAGCCTGGCTTCGGC
ACCTGCGGGAGCCTCTCGTCCCCTTGCAGCATTATCGACGCGCCCTGGAC
GCGGGCCAGGCCCAAGACCTGGCGCCGACGCTCGCGTTCCTCGACACGGT
CCTCCCCAAGGCCAATGCGGCCACCTTGGTCTACCTGATCCATTTTCTGA
ACCACTGCGCCGAGCTCTCTCAGTTCAATCAAATGACGCCCAGGAACCTG
GCCATCGTCTTCTCTCCGAACCTCCTCCGCCATCCCTCCAACGACCCCAT
GCTCATGGTCCAAAACGCAGAAAACGAGAGGAAGTTCGTCATTCAGCTCA
TGCGTGCCCTTGTCAGTCCCGCCGAACCCTCTCCTACGACCGCTTCGCCG
TCGGTGCCTCCACTTGTCTCCTCGCGATGATTTGCACTTGGAGAAACACG
CTAATTTGGCGGACTCTATTGAAGTGCAAAAAATGTAAAGCAGGACCTTG
ATTGAAATGCAAACGATTGTAAATATCGGTCAGGTGGTCGACCGAGGCGG
CGCTGAGAAGCTCTTGGTTCCTTGGCTCGATGGGAAGAGCGAGGATCAAG
AGGGAGGCCGATCACTTCACTGAGGACGCGTGGTGATCGCCCAAAAACAT
CCAATTAACCGACCTATAAATC back to topCoding sequence (CDS) from alignment at KK037248.1:382487..386008- >rna8327 ID=rna8327|Name=rna8327|organism=Nannochloropsis gaditana|type=CDS|length=3123bp|location=Sequence derived from alignment at KK037248.1:382487..386008- (Nannochloropsis gaditana)
ATGCAGGCAGCATCGCCAGAGCACATTTACGACGATATACTGTACGTGGA
AGAGGATGCAGAGCAAAGCGTGGAGCTATCACAGGAAGCGAGATGCCGGG
TTAAGGAGGGCAAAGACGGGGAGGACAGCGAAGACGGTAGCAGTGATGGC
TATCTTGAAGAGGAGGAGGAGGAGGGAGAGGAGGAAAACGATTTGAGAGG
AACGTTTGAGGACAATTTTGATGCTTTTGTCGATGATTGGGGCGAGGAAG
ATGAATTCACCTGTGCGTGGGACCGCAGTCGAAGCAACGAGGCTAGTGAG
GCGAGAGGAAACGAGGCGGCCGAGCTCCGGCAATTAAGTCTGGAGGTGTC
CAACACTGGGGTCAAATTAGACGGAAATACGACTCTGGATACACTCGCGG
TAACGGCCGGCCGCAGACGGAGCACTCTTTACCACACCTTCACGCAAAGC
CTGTTAATGGAGGCCAAGCTCCACCAGCAGCAGCGCGACAACTTCCAGAG
GGGACGCCTGCGGCACGCAGTCTACGTCCTTCAGCGCGGATTCAGCCTCA
AGAAGAAGGCGGAGCATGAGAAATCGTACAAGGAGCGGTTTCTCTTCCTA
AGCGACGATCTGAGGTCCCTGCGTCTGGCCAAATCGGGCCAAACCCGGCA
TAAAGCCAAGCACATCGCTCAGCTCCGAGACGGCCTTCAGATGGTGAGGG
CGGGGCCCACCCTTCGACATCGACGGGACGCGGAGCAACTCAACTTTCAC
TCGACCACTTTCACCCTGCACGTGCGCAAGGGGAAGGAGGGTAGTTTCAG
CCACCTGGGCCACGGGGGTCTGACGGGAACGACCCCCCCGGGCCCGGAGA
AAGTGATCGACATCTGGTGCTCCTCGGAGAGCCACTGCGAGGAATGGTTG
AAGTGCTTGCCACTGATCGTGAATGCCACGGTCTGCCCCGAGCACGGGCC
CCGGGAGTTGATCTGGAGCGAGCCCGTGGGGCAGGGGGCCGGGATGGAGG
CAGGAGGGTGGGTGGAGGGCCCGCGGCCCTACTTGGAGGGGCTGGCTGAG
GAATTAGCGCGTTCCTCCATCGTCTACTACATGGACGTGCAGCAGAGACG
GCTGCGGCGCCGGACGTTGCGACAGAGCGCGCAAGGTCGAGATATAGGCG
CGGCGGTGGCGGCTGCCATGGCGGTGCATGGCGGGGACAAAAGTAAGACT
CCCCATCAACGGAGCACAGATAATTCTAGCGGCAGCCAAGCCAGCAGCAA
CACCACCGCAGGCAAAGGGGAGGGCCAGGGGAACCACAACGGAAGCCACC
TGCAGAACGCGATGAAGAAGATGCACATCGAGCATTTCTTGTCCAAGGCC
AGGGAGGGCCATGGGGGGGGAAGCCCCTCCGGGCCGGGACTTGAACCCGT
GCACCCGGCAACCACAGCCGCCAGCGCTGCCGCCAGCGCGGCCGTGCTCC
TTCTCCGGCCACGTTCGTTGAACGAGCTTCTGAGCTTTCACGCGTCCCCG
ACCAAGCGTCCTTTCCATGCTTACCTTCGCGAGGAGGGGGCGGCCGCGGC
CCTCAAGGCGTTTCGGCTCATCATGGTCTACATGGGCGACCTGGACGCGG
TGGTGCAAGAAGAGGAGCAGGAACCGGGGGAGGAAGGACACCTCTGGAAG
TCCCCACGCCCACACCGTCCGGCAGGAGGGAGCTGTACCAGCCAAAACAA
CGGCTCGGATCGGCTCCGTCACCATTCCTTCTCCAGCACCGCGAGCATCT
CCTGGCCCTTTCCCGGCGGTCAAACGCAGGCACCGCGTCCTTTTTCGTCT
CCATCGCCCTCCGAGTCCCCTCAATCCTCCTTCTCCTGCTCGTCCCCCGC
CAGCAAGGCCGGCGAGGCCGATGGCGAGGCCCAGCACGCCCTCCTCCTCC
ACCTCTGTGCCCTCGGCCAGGCCCCCAGCCGGGAGCCCGGCGCCTGCCTC
AAACCGCACGCGTGGATGCACGACTTGCGCAACGAGCTGTACGTGGCCGC
GCTCGCCCAGACGATTCAGAACCCGGACCCTGCTTCCTGTTTGCGCGGCT
GGCGCCTGCTGGTCGCTTTCGCGCATTCGTTCATGCCGACGGACGATGAC
CTCCGCGAGTGCCTCATCTGGCACGCGGACCGGGCCTGCCACCAGTACGC
CGCCCCTCCGCCCTTGCCTCCGGCCTCGGGGGGGGGCAGGGGAAGCGAAG
GAGGGAGGGAGAGCAAGGAGATGAGGACCGGGGGCCGGGGCCTTGATGCC
AGCGGCTTGGCCTACCACGCCTACACCGTCTTCGTGAACACAGAGCGGGA
TCTTCAGCAGCCACCAGGTCGGGATTGCGCAAGCGGAAGGGAGGGAAGGG
CCGCCCCGGTGGGCCTGACCGTCGCGGAGTTGGACCGTATCCAAGCCTTG
GTCATCCCGCCCACGGTCTTCGACTGCTCCTTGGAAGAGGTCCTGCGGAA
GGAGCTGGTCGTTGTCCGAGGGGGCGGAGGAGGGGGGGGCGGAGGCCTCC
CATCGAGCGAGATGCTCCTGGAGAATGGGAACGTGCCGTTGATCGTCCAA
GTCCTGATCCGAAAATTCCAAGAGCTGGAGGGCTACGAGGTGGAAGGCAT
CTTCCGTCGCGCTGCCGTCACGGAGCGCGTGCTCGCAGTCAAGCAGGGCC
TGGAGGACGGGAGCTACGTGGTGTACGGGACCGAGGCCGTGGACACGACG
GACCCGATGGTGGTGGCCGACCTGCTCAAAGCCTGGCTTCGGCACCTGCG
GGAGCCTCTCGTCCCCTTGCAGCATTATCGACGCGCCCTGGACGCGGGCC
AGGCCCAAGACCTGGCGCCGACGCTCGCGTTCCTCGACACGGTCCTCCCC
AAGGCCAATGCGGCCACCTTGGTCTACCTGATCCATTTTCTGAACCACTG
CGCCGAGCTCTCTCAGTTCAATCAAATGACGCCCAGGAACCTGGCCATCG
TCTTCTCTCCGAACCTCCTCCGCCATCCCTCCAACGACCCCATGCTCATG
GTCCAAAACGCAGAAAACGAGAGGAAGTTCGTCATTCAGCTCATGCGTGC
CCTTGTCAGTCCCGCCGAACCCTCTCCTACGACCGCTTCGCCGTCGGTGC
CTCCACTTGTCTCCTCGCGATGA back to top
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