rna8318, rna8318 (mRNA) Nannochloropsis gaditana

Overview
Namerna8318
Unique Namerna8318
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2907
Alignment locationKK037248.1:359352..360277 +

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Properties
Property NameValue
Productglutathione s-transferase
Orig transcript idgnl|cribi|Naga_100066g3.10324.mrna
Orig protein idgnl|cribi|Naga_100066g3.10324
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:359352..360277 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100066g3gene8057Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8318rna8318-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22367.1cds8291Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8318 ID=rna8318|Name=rna8318|organism=Nannochloropsis gaditana|type=mRNA|length=2907bp
GTACAGAAATGGAGCTGGCTTTGATAACATTTTCCAGATAAGCGGCGGCC
AGTCACTTGGAAAAGAAAATATCTTGCTGTTTGATAATGGTGGTCGAGCC
CACTGGCATTATGGACGGAGATGAGACACAAGCCGGTATGACTCCTTCAA
CGATCAAAATACCGGTAGATTGTAGAAGGATGCTGACGAAAGAAGAGGGT
TGGAATTCGGGTACCGATAGCAAATATCGATGTGAGGCTAAAGGATCAGG
ACGGGGCAAAGATGTTTCTCCTACGTCTACTTCTCCACTTCTTGTGCCGG
TGGCGGATACAGAAATCAAAAGGAAAGTTGGCTGTATAGGTGAAGATGGT
AGGAGTAGTGATGATTCATCAGACGACGACGGTGACCGGGGGATGCAGCT
TGGGTTTGTGGAGCGGCTCCCCGAGGAGATGCAAAATCGCTTGTTGTTCC
AAGACCCTGACTGGCGCGACTGGGACGGAGGGAAAGTGGGCGGGAAGCCC
ATATGGCTAAACCCTAGAGATCTACCCCCTCAAAAATTGTTGCTTTGTCC
CTCCTGCCAAGATCCTCTTAGCTTCGTCCTGCAGATTTATTGCCCTCTTG
ACGAGCCTGAGGAGGCCTTTCATCGCGCCCTATACGTCTTTGTCTGCCAA
AAGTTTCGATGCCAAGGACCGGGGTGCGTTAAAGCTCTGCGCTGTCAATT
ACCTCGTCAAAATTTATTTTATGCTTCAGATCCTCGGGATATTAGGAAAA
ACGGAGGCCGTATAAAGGGACGAGCAGCCCTTGCAGTGCGGACGTGTGAC
GTGTGCGGGCTGCGGGCAGACAAAGTCTGCGCGGGCTGTAAACGCGTTAG
CTACTGCACACCCAAACATCAAAAGGAAGGATGGAAAACAGGACATAAAT
TGGACTGCAGAAAAGTGGAGAGAGAAAAGCTCGCTACCGAGGGTGGCGGC
CAGGAAAGGGGTGCAAACCTTACCTCTGGGGGTGTCCCAGCGTCTTCGGT
CAATCCCCCTCAGGCGAATGCACCAGACCTTGGGAGACCTGCTGACTCGG
GAGTCAAAAACGCTCTGCGCTCTACATTTCCTGAATATGAGATCGTGATC
GAGGAGGAACGCGTACAGAACGATGCGGTCCGTGACGCTCGTGAGCAGGA
TGCAGACGCGGCGCTTTTAGAGAAATACAAACACGTCATCGTCTCAGAAA
CCGACGACGACGCCTCTCTTGATCAACAGCATTTGAATCAAGCCACGGGG
GCCAAGTTGGCCCTGACGGACGCTCTGAGCTTGCGGTTCCTGGCTGTGAT
CGGTCGCTACCCTGCACAGATTCTTCGCTACGCACGCTGGGATGACGCGG
CCGCCTTGTGGGTCTCCCGAGACGAACGTCCCGCCTCAAGCACCGACATT
CCTTCCTGCCCTCTCTGTGGAGCGAGGCGCGCCTTTGAGTTTCAGGTCAT
GCCGCAACTCCTCCACCACCTCCGGGTGGATGCACAGGTGCAAGCACCCG
GGCATCTCCAGCTCGGCTCCCTGGATTGGGGAACTTTGGCCGTGTATACA
TGCGTTAAAAGTTGTAGGACCGGTGAGAAAGTCACCGGGATCGAGGAGGG
GACGGGAGGGGAAGAGGGGAGGTATGTAGAGGAGTTTGTCTGGCGGCAAA
AGCCGATGGCGTGATCGGAGGCGGGAAAAATTCAAAGCAGTCACACAGCA
ATGAGGATGAGTCTTTCATATCAATGTTTGCTTCCTTCCATGAGTCCTGT
CATCCTTGAATTACGTCCACCCGATCAAAGACGGCTGAACCATCACCACC
ACATCCAATACCCGGACACGCAAGTTGCTTCAAAACATGGCTCCCTGGCG
GCATCTTTATACCACTCATGAAGACGTGGCGCTGCTGCTTCCACCAACTC
CGCGTGTCCATCGACTAACCGTTGCATGAAGGGAAGCAAGGTCGCATCTG
CTGCCGAGAAAGTCGCGCCCGCCAAGAAAGGGCATGGCCCAATAATCTCT
TTGTCGAGCTGATTCAACGATGAAAAAAGGCTAGTTATGTCTTTTCGTTC
GATGGCCGTGCGAGCGCTCCTCAGGAATGGATTCAGGAGCGAACGCAAGT
GAGTGTAAGCCTTAGGCGAGGCGGGAACCAGCGGATTGGGAAAGCCAAGC
TTTGGACCTGGAAGGCTTGTAAGATGGTCAAGAATATTGTCGGACTCCAC
AACACATCGCCCAGACGGCAGCCATAGCACTGGTACCTGTCCTTTAGGAC
TGATGTCCAGAAACCATTGCGGTTTGCCACTCCCTCCGTAGAGTCCTACC
TCCAACAAATCATAATCCTTGGACCCAGCATACAAGTATTCAAGCGCAAT
CCACGCTTTTTGCGCAAAAGGGCATTTTTTGTTCGTGACGAGTCGAAGCC
GTGAAGGGTTCGAAGGTTTGGAAGAAGAGGCAGAAATCATACTTAATGGT
GTCAAATAAGCCTGAGTGCCGAGGAGGAAGAGGCAGAGGGAGAAAAATAT
TGCGCACCACCCGCTGACGCCCGATGGAGTTGTTGCAACTCTTCGACTTC
TCATTCAGCTCACTTTTCCGGCAAAGTAGCTGAAGAAGCGTCGTAAACTC
TGTGCTGCAGAGGAGGAAAGGGGTGGGGAAGGGGGGGGGAGGTTACTTCG
TTTAAGACACATTGTACCACTTTTTTTCCTCATTTACGCGAGTTGCATGA
AAGTTTCACTCGTGAAAGCGAGACAATTAATTGAATTGCAAGTGAGTGTT
CATATTGAACAATCAGACAACCTTGCGTAGCGGTACACGTCTCTCTGGGC
ACACAACCCACATGACTGGTGGGCATATCACCAAACCCTTCGGAAGAAAA
TTTTGATAGAATCAAGAATACAGCTGTAGATCGTAAATCCAATGATATTC
ATTTTTG
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protein sequence of rna8318

>rna8318-protein ID=rna8318-protein|Name=rna8318|organism=Nannochloropsis gaditana|type=polypeptide|length=253bp
MRSRRVATTPSGVSGWCAIFFSLCLFLLGTQAYLTPLSMISASSSKPSNP
SRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLD
ISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAY
THLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFS
AADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYW
MWW
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mRNA from alignment at KK037248.1:359352..360277+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8318 ID=rna8318|Name=rna8318|organism=Nannochloropsis gaditana|type=mRNA|length=926bp|location=Sequence derived from alignment at KK037248.1:359352..360277+ (Nannochloropsis gaditana)
ccccccttccccacccctttcctcctctgcagCACAGAGTTTACGACGCT TCTTCAGCTACTTTGCCGGAAAAGTGAGCTGAATGAGAAGTCGAAGAGTT GCAACAACTCCATCGGGCGTCAGCGGGTGGTGCGCAatatttttctccct ctgcctcttcctcctcggcactcAGGCTTATTTGACACCATTAAGTATGA tttctgcctcttcttccaaaccTTCGAACCCTTCACGGCTTCGACTCGTC ACGAACAAAAAATGCCCTTTTGCGCAAAAAGCGTGGATTGCGCTTGAATA CTTGTATGCTGGGTCCAAGGATTATGATTTGTTGGAGGTAGGACTCTACG GAGGGAGTGGCAAACCGCAATGGTTTCTGGACATCAGTCCTAAAGGACAG GTACCAGTGCTATGGCTGCCGTCTGGGCGATGTGTTGTGGAGTCCGACAA TATTCTTGACCATCTTACAAGCCTTCCAGGTCCAAAGCTTGGCTTTCCCA ATCCGCTGGTTCCCGCCTCGCCTAAGGCTTACACTCACTTGCGTTCGCTC CTGAATCCATTCCTGAGGAGCGCTCGCACGGCCATCGAACGAAAAGACAT AACTAGCCTTTTTTCATCGTTGAATCAGCTCGACAAAGAGATTATTGGGC CATGCCCTTTCTTGGCGGGCGCGACTTTCTCGGCAGCAGATGCGACCTTG CTTCCCTTCATGCAACGGTTAGTCGATGGACACGCGGAGTTGGtggaagc agcagcgccACGTCTTCATGAGTGGTATAAAGATGCCGCCAGGGAGCCAT GTTTTGAAGCAACTTGCGTGTCCGGGTATTGGatgtggtggtgatggttc AGCCGTCTTTGATCGGGTGGACGTAATTCAAGGATGACAGGACTCATGGA AGGAAGCAAACATTGATATGAAAGAC
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Coding sequence (CDS) from alignment at KK037248.1:359352..360277+

>rna8318 ID=rna8318|Name=rna8318|organism=Nannochloropsis gaditana|type=CDS|length=762bp|location=Sequence derived from alignment at KK037248.1:359352..360277+ (Nannochloropsis gaditana)
ATGAGAAGTCGAAGAGTTGCAACAACTCCATCGGGCGTCAGCGGGTGGTG
CGCAatatttttctccctctgcctcttcctcctcggcactcAGGCTTATT
TGACACCATTAAGTATGAtttctgcctcttcttccaaaccTTCGAACCCT
TCACGGCTTCGACTCGTCACGAACAAAAAATGCCCTTTTGCGCAAAAAGC
GTGGATTGCGCTTGAATACTTGTATGCTGGGTCCAAGGATTATGATTTGT
TGGAGGTAGGACTCTACGGAGGGAGTGGCAAACCGCAATGGTTTCTGGAC
ATCAGTCCTAAAGGACAGGTACCAGTGCTATGGCTGCCGTCTGGGCGATG
TGTTGTGGAGTCCGACAATATTCTTGACCATCTTACAAGCCTTCCAGGTC
CAAAGCTTGGCTTTCCCAATCCGCTGGTTCCCGCCTCGCCTAAGGCTTAC
ACTCACTTGCGTTCGCTCCTGAATCCATTCCTGAGGAGCGCTCGCACGGC
CATCGAACGAAAAGACATAACTAGCCTTTTTTCATCGTTGAATCAGCTCG
ACAAAGAGATTATTGGGCCATGCCCTTTCTTGGCGGGCGCGACTTTCTCG
GCAGCAGATGCGACCTTGCTTCCCTTCATGCAACGGTTAGTCGATGGACA
CGCGGAGTTGGtggaagcagcagcgccACGTCTTCATGAGTGGTATAAAG
ATGCCGCCAGGGAGCCATGTTTTGAAGCAACTTGCGTGTCCGGGTATTGG
atgtggtggtga
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Synonyms
Publications