EWM22367.1, cds8291 (CDS) Nannochloropsis gaditana

Overview
NameEWM22367.1
Unique Namecds8291
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:359434..360195 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22367.1
Productglutathione s-transferase
Orig transcript idgnl|cribi|Naga_100066g3.10324.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:359434..360195 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR004045Glutathione_S-Trfase_N
IPR010987Glutathione-S-Trfase_C-like
IPR012336Thioredoxin-like_fold
Homology
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|585102868|gb|EWM22367.1| (glutathione s-transferase [Nannochloropsis gaditana])

HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query:    1 MRSRRVATTPSGVSGWCAIFFSLCLFLLGTQAYLTPLSMISASSSKPSNPSRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
            MRSRRVATTPSGVSGWCAIFFSLCLFLLGTQAYLTPLSMISASSSKPSNPSRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW
Sbjct:    1 MRSRRVATTPSGVSGWCAIFFSLCLFLLGTQAYLTPLSMISASSSKPSNPSRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253          
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|551670699|ref|XP_005838107.1| (hypothetical protein GUITHDRAFT_161619 [Guillardia theta CCMP2712] >gi|428182266|gb|EKX51127.1| hypothetical protein GUITHDRAFT_161619 [Guillardia theta CCMP2712])

HSP 1 Score: 127.872 bits (320), Expect = 2.631e-31
Identity = 80/207 (38.65%), Postives = 108/207 (52.17%), Query Frame = 0
Query:   51 SRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTH-LRSLLNPFLRSARTAIE-RKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAE--LVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
            S + L TNK CPFAQKAWIALE        YDL+E+ LYG  GKP+WFLD++PKGQVPVL     + VVESD IL ++       +G    L           ++ L +  L S +  I      TSL  +L ++++ I G  PF+ G  F+ AD    PF QR++   A   L     P++  WY+    +P F  T V  +W WW
Sbjct:   65 SDVTLYTNKMCPFAQKAWIALEEKKV---KYDLVEISLYGSGGKPRWFLDMNPKGQVPVL-KHGDKVVVESDEILKYIDQ----HMGSTGDLTKGHESDVAAWMKFLGSEVLPSGKALINGYGSKTSLNEALRRMEERIQG--PFIFGGDFTLADIASAPFFQRMMTEQARLGLNRQEYPKIFAWYEAIKAKPSFSNTVVKSWWWWW 261          
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|219114367|ref|XP_002176354.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402600|gb|EEC42590.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 114.005 bits (284), Expect = 1.618e-27
Identity = 73/207 (35.27%), Postives = 99/207 (47.83%), Query Frame = 0
Query:   50 PSRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVV-ESDNILDHLTS--LPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
            PS  R VT+KKCPFAQKAW ALE L      Y L E+ LYG +GKP WF  ++P+G VPVL    G  V  +SD ILD +    + G    +P+       +     R  +N  L   +  +  +   +L   L  +D+ ++G  P+L G   + AD    PF+ RL D   E       RL  W K    +  F  T  S +W WW
Sbjct:    7 PSATRFVTHKKCPFAQKAWCALECL---QTPYQLEEIPLYGANGKPDWFWKLNPQGTVPVLVCHGGAVVFPDSDVILDQIEKGVVKGAVSLYPDD-NEGDQRRIREWRDRINAMLPVGKLCVLDQSAVALQPLLQSMDQAVVG--PYLVGEQITTADCHAFPFLWRLND---EFDLTEYKRLQSWLKTCEEQTAFRKTIQSSWWWWW 204          
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|873227515|emb|CEM18442.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 101.293 bits (251), Expect = 9.273e-23
Identity = 69/196 (35.20%), Postives = 93/196 (47.45%), Query Frame = 0
Query:   61 CPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLD---KEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
            CPFAQ+ WIALE        Y L EV LYG  GKP+WFLD++PKG VPVL +  G+ V ES+  LD +  L  P L  P P      +    L   L P  ++A      K++ +L   + + +   +E  G   FL G   S AD + +PF  RL +    +     P  HEW            T +S +W WW
Sbjct:    2 CPFAQRTWIALE---EAGLPYKLTEVSLYGAGGKPKWFLDLNPKGLVPVL-VIDGQPVAESEATLDAIAEL-APSLATPTP--SKRQQWRDMLEQRLIPVGKAAVLNPSSKNMAALRVVIAEWEAKLRERPGKGHFLCGEALSIADVSAVPFWSRLQEEMDCVGAEEFPLTHEWLAACRAREAVRRTQMSSWWWWW 190          
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|1210524273|dbj|GAX17002.1| (glutathione S-transferase [Fistulifera solaris])

HSP 1 Score: 90.5077 bits (223), Expect = 2.492e-18
Identity = 65/210 (30.95%), Postives = 96/210 (45.71%), Query Frame = 0
Query:   51 SRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVL---WLPSGRCVVESDNILDHLTSLPGPKLGFPNPL--VPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEII---GPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMW 252
            S +RL+TNK CPFAQKAW+ALE        Y++ E+ LYG  GKP WF  ++P G VPVL      + +   +SD IL  + +  G  +   N L    +        R  +N  L + + A+     TS  + + Q + E         +L G   + AD    PF+ RL            P+L  W +  +++P F  T  S +W W
Sbjct:   29 SPVRLITNKMCPFAQKAWLALE---CSQIPYEMEEISLYGAGGKPDWFWKLNPAGTVPVLVQEMASATKVWPDSDLILQAIGA--GEVVCDNNVLQMTESQRNDVDEWRKQINEMLPTGKKAVLGSGNTSELAKMLQDNLESKLSSQDTDYLVGNAVTIADCHAFPFLWRLDQEFGLATGLNCPKLGAWVERRSKQPEFRKTIQSAWWWW 233          
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|1072232676|gb|OEU17407.1| (putative dehydroascorbate reductase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 87.0409 bits (214), Expect = 5.417e-17
Identity = 60/185 (32.43%), Postives = 86/185 (46.49%), Query Frame = 0
Query:   52 RLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWL---------------------PSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTH-LRSLLNPFLRSARTAI-ERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRL 213
             +  VTNK CPFAQKAWIALE   A +  Y L +V LYG  GKP WF  ++PKGQVP+L +                      +   + +SD ILD + S    KL   +    A+     +  RS LN FL   + A+    D   ++  L ++D  +    P++     + AD    PF+ R+
Sbjct:   17 EILFVTNKMCPFAQKAWIALE---AANISYKLEQVSLYGPGGKPDWFWKLNPKGQVPILQVINNNNDDNNYNNNNNNNNNNDNNDYIIADSDQILDEIVSSKTSKLFVVHSDDEAAAAVKINTFRSTLNEFLPIGKEAVLGGGDRKRMWKKLKEIDNLLGEEGPYVLDDKLTIADCAAFPFLWRI 198          
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|298714871|emb|CBJ25770.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 84.3445 bits (207), Expect = 1.036e-16
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 0
Query:   83 LLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSA-RTAI----ERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAEL-VEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
            + EV LYG  GKP WF+D++PKG+VPVL +  G+ +V S+  +D L  +PG            SP+A    RS++N  L+SA + A+       D  SL + L  L+   +   P  A + F+AADA+  PF+QR+   H E    +   RL  WY  A+  P    T    +W WW
Sbjct:    1 MKEVSLYGSGGKPSWFMDLNPKGEVPVL-VVDGKPIVGSEETVDFL--MPG----------ELSPEAL-RWRSIVNDRLKSAGKRAVFSGGSETDRNSLNAVLQDLEA-CLSNGPERA-SEFTAADASAFPFLQRV---HGEFGFPSECKRLEAWYASASSRPGVRKTIKQDFWWWW 158          
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|922835324|gb|KOO15145.1| (glutathione S-transferase [Vibrio xuii])

HSP 1 Score: 79.337 bits (194), Expect = 4.007e-14
Identity = 59/206 (28.64%), Postives = 102/206 (49.51%), Query Frame = 0
Query:   53 LRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGP-KLGFPNPLVPASPKAYTHLRS----LLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQR--LVDGHA--ELVEAAAPRLHEWYKDAAREPCFEATCVSGY 249
            +++++ K CPF Q+   ALE   A    Y++  + L   S KPQWFLDISP GQVP+L   +G  + ESD I++++    GP + G  N    A  +A+++L S         +RS+  A   + + +L  +  +++K++ G  PF  G   S  D   LP + R  ++  H   ++++   P++  W +        E T    +
Sbjct:    2 IKIISFKICPFVQRVTAALE---AKKIPYEIEYISL---SDKPQWFLDISPNGQVPLLVTETGTALFESDAIIEYIEDEFGPLEQGVTNEQ-RALDRAWSYLGSKHYLAQCGTMRSSDKATLTEKVANLAKAFAKVEKQVAG--PFFKGEQLSNVDMAWLPLLHRAHIIKAHTCFDMLD-GFPKVQAWQQQLMETGLVEKTVAEDF 197          
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|1176483656|ref|WP_082314886.1| (glutathione S-transferase [Vibrio coralliilyticus] >gi|1169618564|gb|ARC93958.1| glutathione S-transferase [Vibrio coralliilyticus])

HSP 1 Score: 79.337 bits (194), Expect = 4.090e-14
Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 0
Query:   53 LRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGP-KLGFPNPLVPASPKAYTHLRS----LLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQR 212
            +++V+ K CPF Q+   ALE   A    Y++  + L     KPQWFLDISP GQVPV+   +G  + ESD I++++    GP + G  N    A  +A+++L S    +    +RSA  A   + +  L  + ++ +K++ G  PF  G   S  D   LP + R
Sbjct:    2 IKVVSFKICPFVQRVTAALE---AKKIPYEIEYIDL---KNKPQWFLDISPNGQVPVMVAENGTALFESDAIIEYIEDEFGPLEQGVTNEQ-RALDRAWSYLASKHYLVQCSTMRSADEATLTERVEKLAKAFSKAEKQLAG--PFFKGEQMSNVDMAWLPLLHR 157          
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|490546151|ref|WP_004411275.1| (glutathione S-transferase [Vibrio orientalis] >gi|260937630|gb|EEX93618.1| glutathione S-transferase [Vibrio orientalis CIP 102891 = ATCC 33934] >gi|342810908|gb|EGU45977.1| glutathione S-transferase [Vibrio orientalis CIP 102891 = ATCC 33934])

HSP 1 Score: 78.9518 bits (193), Expect = 4.913e-14
Identity = 59/206 (28.64%), Postives = 102/206 (49.51%), Query Frame = 0
Query:   53 LRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGP-KLGFPNPLVPASPKAYTHLRSLLN----PFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQR--LVDGHA--ELVEAAAPRLHEWYKDAAREPCFEATCVSGY 249
            +++++ K CPF Q+   ALE   A    Y++  + L   S KPQWFLDISP GQVP+L   +G  + ESD I++++    GP + G  N    A  +A+++L S         +RS+  A   + + +L  +  +++K++ G  PF  G   S  D   LP + R  ++  H   ++++   P++  W +        E T    +
Sbjct:    2 IKIISFKICPFVQRVTAALE---AKKIPYEIEYISL---SDKPQWFLDISPNGQVPLLVTETGTALFESDAIIEYIEDEFGPLEQGVTNEQ-RALDRAWSYLGSKHYLPQCGTMRSSDQATLTEKVANLAKAFAKVEKQVAG--PFFIGEQLSNVDMAWLPLLHRAYIIKAHTCFDMLD-GFPKVQAWQQQLMETGLVEKTVAEDF 197          
The following BLAST results are available for this feature:
BLAST of EWM22367.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102868|gb|EWM22367.1|0.000e+0100.00glutathione s-transferase [Nannochloropsis gaditan... [more]
gi|551670699|ref|XP_005838107.1|2.631e-3138.65hypothetical protein GUITHDRAFT_161619 [Guillardia... [more]
gi|219114367|ref|XP_002176354.1|1.618e-2735.27predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|873227515|emb|CEM18442.1|9.273e-2335.20unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210524273|dbj|GAX17002.1|2.492e-1830.95glutathione S-transferase [Fistulifera solaris][more]
gi|1072232676|gb|OEU17407.1|5.417e-1732.43putative dehydroascorbate reductase [Fragilariopsi... [more]
gi|298714871|emb|CBJ25770.1|1.036e-1635.59conserved unknown protein [Ectocarpus siliculosus][more]
gi|922835324|gb|KOO15145.1|4.007e-1428.64glutathione S-transferase [Vibrio xuii][more]
gi|1176483656|ref|WP_082314886.1|4.090e-1433.33glutathione S-transferase [Vibrio coralliilyticus]... [more]
gi|490546151|ref|WP_004411275.1|4.913e-1428.64glutathione S-transferase [Vibrio orientalis] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8318rna8318Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications