EWM22367.1, cds8291 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|585102868|gb|EWM22367.1| (glutathione s-transferase [Nannochloropsis gaditana]) HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0 Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query: 1 MRSRRVATTPSGVSGWCAIFFSLCLFLLGTQAYLTPLSMISASSSKPSNPSRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
MRSRRVATTPSGVSGWCAIFFSLCLFLLGTQAYLTPLSMISASSSKPSNPSRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW
Sbjct: 1 MRSRRVATTPSGVSGWCAIFFSLCLFLLGTQAYLTPLSMISASSSKPSNPSRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|551670699|ref|XP_005838107.1| (hypothetical protein GUITHDRAFT_161619 [Guillardia theta CCMP2712] >gi|428182266|gb|EKX51127.1| hypothetical protein GUITHDRAFT_161619 [Guillardia theta CCMP2712]) HSP 1 Score: 127.872 bits (320), Expect = 2.631e-31 Identity = 80/207 (38.65%), Postives = 108/207 (52.17%), Query Frame = 0
Query: 51 SRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTH-LRSLLNPFLRSARTAIE-RKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAE--LVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
S + L TNK CPFAQKAWIALE YDL+E+ LYG GKP+WFLD++PKGQVPVL + VVESD IL ++ +G L ++ L + L S + I TSL +L ++++ I G PF+ G F+ AD PF QR++ A L P++ WY+ +P F T V +W WW
Sbjct: 65 SDVTLYTNKMCPFAQKAWIALEEKKV---KYDLVEISLYGSGGKPRWFLDMNPKGQVPVL-KHGDKVVVESDEILKYIDQ----HMGSTGDLTKGHESDVAAWMKFLGSEVLPSGKALINGYGSKTSLNEALRRMEERIQG--PFIFGGDFTLADIASAPFFQRMMTEQARLGLNRQEYPKIFAWYEAIKAKPSFSNTVVKSWWWWW 261
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|219114367|ref|XP_002176354.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402600|gb|EEC42590.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 114.005 bits (284), Expect = 1.618e-27 Identity = 73/207 (35.27%), Postives = 99/207 (47.83%), Query Frame = 0
Query: 50 PSRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVV-ESDNILDHLTS--LPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
PS R VT+KKCPFAQKAW ALE L Y L E+ LYG +GKP WF ++P+G VPVL G V +SD ILD + + G +P+ + R +N L + + + +L L +D+ ++G P+L G + AD PF+ RL D E RL W K + F T S +W WW
Sbjct: 7 PSATRFVTHKKCPFAQKAWCALECL---QTPYQLEEIPLYGANGKPDWFWKLNPQGTVPVLVCHGGAVVFPDSDVILDQIEKGVVKGAVSLYPDD-NEGDQRRIREWRDRINAMLPVGKLCVLDQSAVALQPLLQSMDQAVVG--PYLVGEQITTADCHAFPFLWRLND---EFDLTEYKRLQSWLKTCEEQTAFRKTIQSSWWWWW 204
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|873227515|emb|CEM18442.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 101.293 bits (251), Expect = 9.273e-23 Identity = 69/196 (35.20%), Postives = 93/196 (47.45%), Query Frame = 0
Query: 61 CPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLD---KEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
CPFAQ+ WIALE Y L EV LYG GKP+WFLD++PKG VPVL + G+ V ES+ LD + L P L P P + L L P ++A K++ +L + + + +E G FL G S AD + +PF RL + + P HEW T +S +W WW
Sbjct: 2 CPFAQRTWIALE---EAGLPYKLTEVSLYGAGGKPKWFLDLNPKGLVPVL-VIDGQPVAESEATLDAIAEL-APSLATPTP--SKRQQWRDMLEQRLIPVGKAAVLNPSSKNMAALRVVIAEWEAKLRERPGKGHFLCGEALSIADVSAVPFWSRLQEEMDCVGAEEFPLTHEWLAACRAREAVRRTQMSSWWWWW 190
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|1210524273|dbj|GAX17002.1| (glutathione S-transferase [Fistulifera solaris]) HSP 1 Score: 90.5077 bits (223), Expect = 2.492e-18 Identity = 65/210 (30.95%), Postives = 96/210 (45.71%), Query Frame = 0
Query: 51 SRLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVL---WLPSGRCVVESDNILDHLTSLPGPKLGFPNPL--VPASPKAYTHLRSLLNPFLRSARTAIERKDITSLFSSLNQLDKEII---GPCPFLAGATFSAADATLLPFMQRLVDGHAELVEAAAPRLHEWYKDAAREPCFEATCVSGYWMW 252
S +RL+TNK CPFAQKAW+ALE Y++ E+ LYG GKP WF ++P G VPVL + + +SD IL + + G + N L + R +N L + + A+ TS + + Q + E +L G + AD PF+ RL P+L W + +++P F T S +W W
Sbjct: 29 SPVRLITNKMCPFAQKAWLALE---CSQIPYEMEEISLYGAGGKPDWFWKLNPAGTVPVLVQEMASATKVWPDSDLILQAIGA--GEVVCDNNVLQMTESQRNDVDEWRKQINEMLPTGKKAVLGSGNTSELAKMLQDNLESKLSSQDTDYLVGNAVTIADCHAFPFLWRLDQEFGLATGLNCPKLGAWVERRSKQPEFRKTIQSAWWWW 233
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|1072232676|gb|OEU17407.1| (putative dehydroascorbate reductase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 87.0409 bits (214), Expect = 5.417e-17 Identity = 60/185 (32.43%), Postives = 86/185 (46.49%), Query Frame = 0
Query: 52 RLRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWL---------------------PSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTH-LRSLLNPFLRSARTAI-ERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRL 213
+ VTNK CPFAQKAWIALE A + Y L +V LYG GKP WF ++PKGQVP+L + + + +SD ILD + S KL + A+ + RS LN FL + A+ D ++ L ++D + P++ + AD PF+ R+
Sbjct: 17 EILFVTNKMCPFAQKAWIALE---AANISYKLEQVSLYGPGGKPDWFWKLNPKGQVPILQVINNNNDDNNYNNNNNNNNNNDNNDYIIADSDQILDEIVSSKTSKLFVVHSDDEAAAAVKINTFRSTLNEFLPIGKEAVLGGGDRKRMWKKLKEIDNLLGEEGPYVLDDKLTIADCAAFPFLWRI 198
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|298714871|emb|CBJ25770.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 84.3445 bits (207), Expect = 1.036e-16 Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = 0
Query: 83 LLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGPKLGFPNPLVPASPKAYTHLRSLLNPFLRSA-RTAI----ERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQRLVDGHAEL-VEAAAPRLHEWYKDAAREPCFEATCVSGYWMWW 253
+ EV LYG GKP WF+D++PKG+VPVL + G+ +V S+ +D L +PG SP+A RS++N L+SA + A+ D SL + L L+ + P A + F+AADA+ PF+QR+ H E + RL WY A+ P T +W WW
Sbjct: 1 MKEVSLYGSGGKPSWFMDLNPKGEVPVL-VVDGKPIVGSEETVDFL--MPG----------ELSPEAL-RWRSIVNDRLKSAGKRAVFSGGSETDRNSLNAVLQDLEA-CLSNGPERA-SEFTAADASAFPFLQRV---HGEFGFPSECKRLEAWYASASSRPGVRKTIKQDFWWWW 158
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|922835324|gb|KOO15145.1| (glutathione S-transferase [Vibrio xuii]) HSP 1 Score: 79.337 bits (194), Expect = 4.007e-14 Identity = 59/206 (28.64%), Postives = 102/206 (49.51%), Query Frame = 0
Query: 53 LRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGP-KLGFPNPLVPASPKAYTHLRS----LLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQR--LVDGHA--ELVEAAAPRLHEWYKDAAREPCFEATCVSGY 249
+++++ K CPF Q+ ALE A Y++ + L S KPQWFLDISP GQVP+L +G + ESD I++++ GP + G N A +A+++L S +RS+ A + + +L + +++K++ G PF G S D LP + R ++ H ++++ P++ W + E T +
Sbjct: 2 IKIISFKICPFVQRVTAALE---AKKIPYEIEYISL---SDKPQWFLDISPNGQVPLLVTETGTALFESDAIIEYIEDEFGPLEQGVTNEQ-RALDRAWSYLGSKHYLAQCGTMRSSDKATLTEKVANLAKAFAKVEKQVAG--PFFKGEQLSNVDMAWLPLLHRAHIIKAHTCFDMLD-GFPKVQAWQQQLMETGLVEKTVAEDF 197
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|1176483656|ref|WP_082314886.1| (glutathione S-transferase [Vibrio coralliilyticus] >gi|1169618564|gb|ARC93958.1| glutathione S-transferase [Vibrio coralliilyticus]) HSP 1 Score: 79.337 bits (194), Expect = 4.090e-14 Identity = 55/165 (33.33%), Postives = 86/165 (52.12%), Query Frame = 0
Query: 53 LRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGP-KLGFPNPLVPASPKAYTHLRS----LLNPFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQR 212
+++V+ K CPF Q+ ALE A Y++ + L KPQWFLDISP GQVPV+ +G + ESD I++++ GP + G N A +A+++L S + +RSA A + + L + ++ +K++ G PF G S D LP + R
Sbjct: 2 IKVVSFKICPFVQRVTAALE---AKKIPYEIEYIDL---KNKPQWFLDISPNGQVPVMVAENGTALFESDAIIEYIEDEFGPLEQGVTNEQ-RALDRAWSYLASKHYLVQCSTMRSADEATLTERVEKLAKAFSKAEKQLAG--PFFKGEQMSNVDMAWLPLLHR 157
BLAST of EWM22367.1 vs. NCBI_GenBank
Match: gi|490546151|ref|WP_004411275.1| (glutathione S-transferase [Vibrio orientalis] >gi|260937630|gb|EEX93618.1| glutathione S-transferase [Vibrio orientalis CIP 102891 = ATCC 33934] >gi|342810908|gb|EGU45977.1| glutathione S-transferase [Vibrio orientalis CIP 102891 = ATCC 33934]) HSP 1 Score: 78.9518 bits (193), Expect = 4.913e-14 Identity = 59/206 (28.64%), Postives = 102/206 (49.51%), Query Frame = 0
Query: 53 LRLVTNKKCPFAQKAWIALEYLYAGSKDYDLLEVGLYGGSGKPQWFLDISPKGQVPVLWLPSGRCVVESDNILDHLTSLPGP-KLGFPNPLVPASPKAYTHLRSLLN----PFLRSARTAIERKDITSLFSSLNQLDKEIIGPCPFLAGATFSAADATLLPFMQR--LVDGHA--ELVEAAAPRLHEWYKDAAREPCFEATCVSGY 249
+++++ K CPF Q+ ALE A Y++ + L S KPQWFLDISP GQVP+L +G + ESD I++++ GP + G N A +A+++L S +RS+ A + + +L + +++K++ G PF G S D LP + R ++ H ++++ P++ W + E T +
Sbjct: 2 IKIISFKICPFVQRVTAALE---AKKIPYEIEYISL---SDKPQWFLDISPNGQVPLLVTETGTALFESDAIIEYIEDEFGPLEQGVTNEQ-RALDRAWSYLGSKHYLPQCGTMRSSDQATLTEKVANLAKAFAKVEKQVAG--PFFIGEQLSNVDMAWLPLLHRAYIIKAHTCFDMLD-GFPKVQAWQQQLMETGLVEKTVAEDF 197 The following BLAST results are available for this feature:
BLAST of EWM22367.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|