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Properties
| Property Name | Value |
|---|
| Product | cyclophilin |
| Orig transcript id | gnl|cribi|Naga_100067g11.2682.mrna |
| Orig protein id | gnl|cribi|Naga_100067g11.2682 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:301431..303658 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8294 ID=rna8294|Name=rna8294|organism=Nannochloropsis gaditana|type=mRNA|length=411bp
ATGTCGTACGAGCCGACTTTCCATCTGGCGACCAATGGGATCTGTGGAGG
CCTGGAGATATTCTTGCCTAAGAGCAGCGAGGCTTTTGTGCACTTTGACT
GCTCGGAGGCCCGCTCTTGGAGCTATGGTTTAGGTGCCTTAAATCAAGGA
ATGCGCGCCCTTACTGTGGCGAAAGAAACAGAGATCCGTAAATGTGAGAG
GGATTGCAGTACAACGTGGATACAGGAGTTGCATCAAAACGACCAAGAAC
AAGGACGAGCCGACATCGCTCATTTGGTGATGGTGGACGAACATCGTAGA
GGCTTGCAGCTTTTCCGCAGAGGACTTCTTGGGATACATGTAAAGCATTT
TCTGAAAGTAGAATCAATCCGACGCTCGTGGAAATGTCTGCATAGGTCGA
GCACGGAGTGA back to topprotein sequence of rna8294 >rna8294-protein ID=rna8294-protein|Name=rna8294|organism=Nannochloropsis gaditana|type=polypeptide|length=200bp
MTHRILPHSSLGDPLHSVVQASINLEIMPNPVVFFDVQTGSGNNLGRIEM
TLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGG
DFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLC
TAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS back to topmRNA from alignment at KK037248.1:301431..303658+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8294 ID=rna8294|Name=rna8294|organism=Nannochloropsis gaditana|type=mRNA|length=2228bp|location=Sequence derived from alignment at KK037248.1:301431..303658+ (Nannochloropsis gaditana)
GGTGCTAAGAGATACCTTTTATATGCAGGTCGCAGGAGGCATTCCACCAC
CTCGCTGTTTGTTGGCGCAAGACATGGACCAGCATGGTCGTCACCCACAG
GGAATACAAAGGTGTTTACGAAGCTGAACATGCGATACACCTTCTCGCTC
TTTTCTGGAAAAGGTTGTGACATTTTGCCTGTGCAGTGGCCGGTCGAGCG
GGAATGAAGTGCTTGGGCGAGGTaaagccttccctctcgcgGACACCAAC
TGCCGCGGAATAAGAAACCCGTCACATGAAAAGACTTCAGGAGtatcttc
tcttttttcttcttcgcggGAAACCGTTTTCTCCAACGAAGCATACTGGT
GCCCAAGAATTGAAATATCCACTAAGTGCTTTTGTAAAACCTCAAGGCGA
TGAGCGTCTGGAAGTCAGACGGTCGTTTTCTCTTGTTCCCGCTGCACGTT
ATGTCTCCTCCCCGAGACAGAATATCAccaagaaaggaggaaagagaaga
agcgaCATTTCTTGTCAGCACGGCCGCAGAATCTTCCATGCCACTCAATT
GAAATTGTTTGTTGTATAGGAGCGACTAAAGCATAGTAGGGAGGCGAATC
ATATGGGCTTGCAATGTTATCAGCTTGTTTCGTCGGAAGTCTACCAGGAC
ATCTACTAGTATAGATCATCACCGAGACGACACGGGTTGGAGGTCTCCTT
TGGGAACCCTGCAGTCTGGCATGAAGGGATACTCACCGCTATGAGGAGGC
AGCATGACGCTTCATTTTTAAGACCTCTTCTAGGCCTTTTGCATGCACAC
TGTGAAAAAGTATACTAGGAATTTTCCCACGTATGACTCATCGAATTCTT
CCTCACTCTTCGTTGGGTGACCCTCTGCACAGCGTTGTACAAGCATCCAT
CAACCTCGAAATCATGCCCAATCCGGTTGTCTTCTTCGACGTCCAGACTG
GCTCTGGCAATAACCTTGGTCGCATTGAGATGACGCTGCGTGCTGATGTC
GTGCCCAAGACGGCTGAGAATTTCAGGGCTCTGTGcacgggcgagaaggg
agcGGGTCGCTCCGGTAAGCCGCTTCACTTTAAGGGCTCCACCTTCCACC
GCGTGATTCCGGACTTCATGTGCCAAGGTGGTGACTTCACTGCCGGCAAC
GGTACTGGCGGCGAGTCTATCTACGGGTAAGATTCTCAGTGATAAGTGGT
CTCTCTTGTCTGTCGGGCCTGCGTAGCTGTTGCGATCTGAGCCCGTCTTG
CTCATGACGTGCCATACACACCCTCGGTCCTTGCTTCTCTTGCAGGAACA
AATTCCCCGACGAAAACTTCACGCTCAAGCACACGGGCCCAGGCATTCTC
TCCATGGCCAACGCCGGCCCCAACACGAACGGCTCCCAGTTCTTCCTTTG
CACGGCCGAGACTGCCTGGTTGGACGGCAAGCACGTGGTGTTTGGGAGTG
TGACGAAGGGCATGGATGTGGTCAAGGCCGTCGAATCCTACGGCTCTCGC
ACGGGGGCCACGCGCGAGAAGATAGTCATTGCCGACTGCGGGCAGCTCTC
CTAAAACAGGGTTCcaagagaaaagggaagcccttcccccttcatgTCAT
TGTCGGTAGATGAGTGGCGAGATTTAGTGAAGTAGAGAGCAAGAGGGAAG
TGCGCCAGGAGAGGACGAATGATCGATGTGTCCTGAGCGTGGAGCTTTCT
CGGGctggacaaggcggaggggccgACGTTCGCAGTGCTCCTGACGTAAT
TTGGGAGGTGCGAGGACACCGACCAGCTTAATGTGACTGAAGAGGGCGAA
CGAGAAGCTGTCTGGGAAAACATGGGACTCGAGAAGAAAGATTGATTAGG
GAGATCGCATCGTGAAATGTGGTTTTAGAAAGTCGTGCGTTTGATCGGTT
TGGACGGTGCGGAGTGACGGAGCAGCGAACGTAAACGGGGATAGCATTCA
CTAGTCCTCTGCGGGACAGTGTAGTCAGAAATCAGTGCAATGGATGGAGA
AACCTGCGGCGTTTCAAATCAACTTTTTTTCTTATTTTGGATGTGCTTTC
TGTTGAACTCGGATGCCACAGTCTCTACCCTAACTAGGAACCCATCTGTC
GGGGAGCGCGCATGTCTGGGATCACCCCCacgaccaccaccaccaccccg
ccctTTCAATAttcctccaaagccgccaCTGCCACAGCCAGGGCCTGAAA
GGGTGAGAACGGCGCGCGAAAATCCAGG back to topCoding sequence (CDS) from alignment at KK037248.1:301431..303658+ >rna8294 ID=rna8294|Name=rna8294|organism=Nannochloropsis gaditana|type=CDS|length=1206bp|location=Sequence derived from alignment at KK037248.1:301431..303658+ (Nannochloropsis gaditana)
ATGACTCATCGAATTCTTCCTCACTCTTCGTTGGGTGACCCTCTGCACAG
CGTTGTACAAGCATCCATCAACCTCGAAATCATGCCCAATCCGGTTGTCT
TCTTCGACGTCCAGACTGGCTCTGGCAATAACCTTGGTCGCATTGAGATG
ACGCTGCGTGCTGATGTCGTGCCCAAGACGGCTGAGAATTTCAGGGCTCT
GTGcacgggcgagaagggagcGGGTCGCTCCGGTAAGCCGCTTCACTTTA
AGGGCTCCACCTTCCACCGCGTGATTCCGGACTTCATGTGCCAAGGTGGT
GACTTCACTGCCGGCAACGGTACTGGCGGCGAGTCTATCTACGGGAACAA
ATTCCCCGACGAAAACTTCACGCTCAAGCACACGGGCCCAGGCATTCTCT
CCATGGCCAACGCCGGCCCCAACACGAACGGCTCCCAGTTCTTCCTTTGC
ACGGCCGAGACTGCCTGGTTGGACGGCAAGCACGTGGTGTTTGGGAGTGT
GACGAAGGGCATGGATGTGGTCAAGGCCGTCGAATCCTACGGCTCTCGCA
CGGGGGCCACGCGCGAGAAGATAGTCATTGCCGACTGCGGGCAGCTCTCC
TAAATGACTCATCGAATTCTTCCTCACTCTTCGTTGGGTGACCCTCTGCA
CAGCGTTGTACAAGCATCCATCAACCTCGAAATCATGCCCAATCCGGTTG
TCTTCTTCGACGTCCAGACTGGCTCTGGCAATAACCTTGGTCGCATTGAG
ATGACGCTGCGTGCTGATGTCGTGCCCAAGACGGCTGAGAATTTCAGGGC
TCTGTGcacgggcgagaagggagcGGGTCGCTCCGGTAAGCCGCTTCACT
TTAAGGGCTCCACCTTCCACCGCGTGATTCCGGACTTCATGTGCCAAGGT
GGTGACTTCACTGCCGGCAACGGTACTGGCGGCGAGTCTATCTACGGGAA
CAAATTCCCCGACGAAAACTTCACGCTCAAGCACACGGGCCCAGGCATTC
TCTCCATGGCCAACGCCGGCCCCAACACGAACGGCTCCCAGTTCTTCCTT
TGCACGGCCGAGACTGCCTGGTTGGACGGCAAGCACGTGGTGTTTGGGAG
TGTGACGAAGGGCATGGATGTGGTCAAGGCCGTCGAATCCTACGGCTCTC
GCACGGGGGCCACGCGCGAGAAGATAGTCATTGCCGACTGCGGGCAGCTC
TCCTAA back to top
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