EWM22394.1, cds8270 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|585102898|gb|EWM22394.1| (cyclophilin [Nannochloropsis gaditana]) HSP 1 Score: 414.846 bits (1065), Expect = 1.023e-146 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query: 1 MTHRILPHSSLGDPLHSVVQASINLEIMPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
MTHRILPHSSLGDPLHSVVQASINLEIMPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS
Sbjct: 1 MTHRILPHSSLGDPLHSVVQASINLEIMPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|760450069|ref|XP_011402103.1| (Peptidyl-prolyl cis-trans isomerase CYP18-4 [Auxenochlorella protothecoides] >gi|675356614|gb|KFM29054.1| Peptidyl-prolyl cis-trans isomerase CYP18-4 [Auxenochlorella protothecoides]) HSP 1 Score: 300.827 bits (769), Expect = 4.156e-102 Identity = 147/173 (84.97%), Postives = 153/173 (88.44%), Query Frame = 0
Query: 28 MPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
M PVVFFDV GS LGRIEM LRADVVPKTAENFRALCTGEKG GRSGKPLHFKGSTFHRVIP FMCQGGDFTAGNGTGGESIYG KF DENF L HTGPGILSMANAGPNTNGSQFFLCTA TAWLDGKHVVFGSVTKG+DVVK +ESYGS +GAT++ I I DCGQL+
Sbjct: 1 MSKPVVFFDVSAGS-TPLGRIEMELRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFKLTHTGPGILSMANAGPNTNGSQFFLCTAATAWLDGKHVVFGSVTKGLDVVKKIESYGSGSGATKQVIRITDCGQLA 172
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|545355360|ref|XP_005643480.1| (cyclophilin-like protein [Coccomyxa subellipsoidea C-169] >gi|384245442|gb|EIE18936.1| cyclophilin-like protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 298.516 bits (763), Expect = 3.486e-101 Identity = 145/173 (83.82%), Postives = 153/173 (88.44%), Query Frame = 0
Query: 28 MPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
M NPVVFFDV G G +GRIEMTLR DV P+TAENFRALCTGEKG GR GKPLHFKGS+FHRVIPDFMCQGGDFTAGNGTGGESIYG KF DENFTLKHTGPGILSMANAG NTNGSQFFLCTA+TAWLDGKHVVFGSVTKGMDVVK +ES+GS +G T + I I DCGQLS
Sbjct: 1 MSNPVVFFDVSAG-GAPVGRIEMTLRNDVTPRTAENFRALCTGEKGVGRMGKPLHFKGSSFHRVIPDFMCQGGDFTAGNGTGGESIYGAKFADENFTLKHTGPGILSMANAGANTNGSQFFLCTAKTAWLDGKHVVFGSVTKGMDVVKKIESFGSGSGKTSKPITITDCGQLS 172
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|159484660|ref|XP_001700372.1| (peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Chlamydomonas reinhardtii] >gi|158272413|gb|EDO98214.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Chlamydomonas reinhardtii]) HSP 1 Score: 296.204 bits (757), Expect = 3.157e-100 Identity = 142/173 (82.08%), Postives = 150/173 (86.71%), Query Frame = 0
Query: 28 MPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
MPNP+VFFD+ T G +GRIEM L AD VPKTAENFRALCTGEKG GRSGKPLHFKGSTFHRVIP+FMCQGGDFT GNGTGGESIYG KFPDENF +HTGPG+LSMANAGPNTNGSQFFLCT ETAWLDGKHVVFG V KGMDVVK VE YGS +G TR I IADCGQL+
Sbjct: 1 MPNPIVFFDI-TADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTFHRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFFLCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATIAIADCGQLA 172
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|551573511|ref|XP_005772559.1| (peptidyl-prolyl cis-trans isomerase putative cyclophilin protein [Emiliania huxleyi CCMP1516] >gi|485624005|gb|EOD20130.1| peptidyl-prolyl cis-trans isomerase putative cyclophilin protein [Emiliania huxleyi CCMP1516]) HSP 1 Score: 295.049 bits (754), Expect = 8.749e-100 Identity = 142/173 (82.08%), Postives = 155/173 (89.60%), Query Frame = 0
Query: 28 MPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
M NPVVFFD+ G G GRIEMTLRADVVPKTAENFRALCTGEKG G+SGKPLHFKGS+FHRVI +FMCQGGDFTAGNGTGGESIYG KF DENF LKHTGPGILSMANAGP TNGSQFFLCT +T WLDGKHVVFGSVTKGM+VVKA+E+ GS++G T +K+VIADCGQ+S
Sbjct: 1 MSNPVVFFDMTIG-GAPAGRIEMTLRADVVPKTAENFRALCTGEKGQGKSGKPLHFKGSSFHRVITNFMCQGGDFTAGNGTGGESIYGAKFADENFQLKHTGPGILSMANAGPGTNGSQFFLCTVKTDWLDGKHVVFGSVTKGMEVVKAIEAVGSQSGQTAKKVVIADCGQIS 172
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|2959712|gb|AAC05639.1| (cyclophilin 1 [Chlamydomonas reinhardtii]) HSP 1 Score: 292.352 bits (747), Expect = 9.864e-99 Identity = 140/173 (80.92%), Postives = 148/173 (85.55%), Query Frame = 0
Query: 28 MPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
MPNP+VFFD+ T G +GRIEM L AD VPKTAENFRALCTGEKG GRSGKPLHFKGSTFHRVIP+FMCQGGDFT GNGTGGESIYG KFPDENF +HTGPG+LSMANAGPNTNGSQFFLCT ETAWLDGKHVVFG V KGMDVVK VE YGS +G TR IADC QL+
Sbjct: 1 MPNPIVFFDI-TADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTFHRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFFLCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATFAIADCAQLA 172
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|551611864|ref|XP_005787000.1| (peptidyl-prolyl isomerase [Emiliania huxleyi CCMP1516] >gi|485640324|gb|EOD34571.1| peptidyl-prolyl isomerase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 291.197 bits (744), Expect = 2.764e-98 Identity = 141/173 (81.50%), Postives = 153/173 (88.44%), Query Frame = 0
Query: 28 MPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
M PVVFFD+ G G GRIEMTLRADVVPKTAENFRALCTGEKG G+SGKPLHFKGS FHRVI +FMCQGGDFTAGNGTGGESIYG KF DENF LKHTGPGILSMANAGP TNGSQFFLCT +T WLDGKHVVFGSVTKGM+VVKA+E+ GS++G T +K+VIADCGQ+S
Sbjct: 1 MSCPVVFFDMTIG-GAPAGRIEMTLRADVVPKTAENFRALCTGEKGMGKSGKPLHFKGSAFHRVITNFMCQGGDFTAGNGTGGESIYGAKFADENFQLKHTGPGILSMANAGPGTNGSQFFLCTVKTDWLDGKHVVFGSVTKGMEVVKAIEAVGSQSGQTAKKVVIADCGQIS 172
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|1207975173|ref|XP_021378464.1| (peptidyl-prolyl cis-trans isomerase 1-like [Mizuhopecten yessoensis] >gi|1205887387|gb|OWF38368.1| Peptidyl-prolyl cis-trans isomerase 1 [Mizuhopecten yessoensis]) HSP 1 Score: 289.271 bits (739), Expect = 1.413e-97 Identity = 140/172 (81.40%), Postives = 150/172 (87.21%), Query Frame = 0
Query: 28 MPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQL 199
M NP VFFD+ G G + GRIEM LRADVVPKT+ENFRALCTGEKG G+SGKPLHFKGS+FHRVI DFMCQGGDFT GNGTGGESIYG KF DENFTLKHTGPGILSMANAGP TNGSQFFLCT +TAWLDGKHVVFGSVTKGM+VVKA+E GS G T + +VIADCGQL
Sbjct: 1 MSNPKVFFDMTIG-GASAGRIEMELRADVVPKTSENFRALCTGEKGTGKSGKPLHFKGSSFHRVITDFMCQGGDFTRGNGTGGESIYGEKFADENFTLKHTGPGILSMANAGPGTNGSQFFLCTVKTAWLDGKHVVFGSVTKGMEVVKAIEKVGSTGGTTSKPVVIADCGQL 171
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|926781812|ref|XP_013899380.1| (peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Monoraphidium neglectum] >gi|761969336|gb|KIZ00361.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Monoraphidium neglectum]) HSP 1 Score: 288.886 bits (738), Expect = 2.249e-97 Identity = 139/175 (79.43%), Postives = 153/175 (87.43%), Query Frame = 0
Query: 28 MPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTK--GMDVVKAVESYGSRTGATREKIVIADCGQLS 200
M NPVV+FD++ G LGRIEM LRADVVPKTAENFRALCTGEKG GRSGKPLHFKGSTFHRVI DFMCQGGDFTAGNGTGGESIYG+KF DENFTLKHTGPG+LSMANAGPNTNGSQFFLCT +T WLDGKHVVFG+V + VV+ +E+YGS +G T ++IVIADCGQLS
Sbjct: 1 MSNPVVYFDIEA-DGQPLGRIEMLLRADVVPKTAENFRALCTGEKGVGRSGKPLHFKGSTFHRVINDFMCQGGDFTAGNGTGGESIYGSKFADENFTLKHTGPGVLSMANAGPNTNGSQFFLCTVKTGWLDGKHVVFGNVRDDASLAVVRKIEAYGSSSGRTSKRIVIADCGQLS 174
BLAST of EWM22394.1 vs. NCBI_GenBank
Match: gi|1188278481|gb|OSS47369.1| (hypothetical protein B5807_07531 [Epicoccum nigrum]) HSP 1 Score: 288.115 bits (736), Expect = 5.215e-97 Identity = 138/173 (79.77%), Postives = 150/173 (86.71%), Query Frame = 0
Query: 28 MPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
M VFFDV +G+ LGRI M LR DVVP+TAENFRALCTGEKG GRSGKPLHFKG++FHRVIP FM QGGDFTAGNGTGGESIYG KF DENFTLKHTGPGILSMANAGPNTNGSQFF+CT +TAWLDGKHVVFG V +GMDVV+ VESYGS +GAT+ KI IADCGQL+
Sbjct: 1 MSKSQVFFDV-AANGSPLGRIVMELRGDVVPQTAENFRALCTGEKGTGRSGKPLHFKGASFHRVIPQFMLQGGDFTAGNGTGGESIYGEKFKDENFTLKHTGPGILSMANAGPNTNGSQFFICTEKTAWLDGKHVVFGQVVQGMDVVQKVESYGSSSGATKAKITIADCGQLA 172 The following BLAST results are available for this feature:
BLAST of EWM22394.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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