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Properties
| Property Name | Value |
|---|
| Product | 60s ribosomal protein l11 |
| Orig transcript id | gnl|cribi|Naga_100017g18.286.mrna |
| Orig protein id | gnl|cribi|Naga_100017g18.286 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:517446..519346 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna829 ID=rna829|Name=rna829|organism=Nannochloropsis gaditana|type=mRNA|length=4097bp
ACTTCATGACCGCCTCGCGCCATCTGCACATTCGCAGGACATGTCTGATG
CTGACGAGGAACTTGATGAGCTTGGCGCTGAGGATGGAGACGTAAATGGA
GAGGCCTCGACACCGCCAATACCGCCACAATCAACAGGCGAGGAGGACAT
GCCCGTCCTGAAGTATCATCGAATGAAGGCGCACGTGGAGACAGTACAGC
GAGTTGGGGGCAGGGACACTCAGATAACAGCCCTGTGCATGCACCCGCGC
TGCTTGATCGTGGGTACCTCGACAGGGACCGTGCACTTGTTGGATTACCA
AGACAAGGGGCGTGAATTAGGGCTTATCCGCGCAGCGGCTCACGGTGGAC
GACAGATCCGGTGTTTCAGCATCGATGATACGGGAGAATACCTGGCGAGC
TGCTCCGATGCGGGCGTGGTGGTCGTGACGTCTTTGACTTTCCCAGCCCA
GACGTTGTCCTCCTCCTCCTCCTTCCTATCCCCATCCCTAACGCGCGGGA
CAGCTACCTTCAAAACAGATAGAAAAGAGGAAGAAATAGCCGAGACGGTG
AAGGCTGGTGGAGGTGCCGTAGCTGCAACCAAGCTTTCTTTCCCTTCCGA
GACCCCTCAAGCCGCGGCAGTTCTCAAGCAGGACGGCATTGAGCCCGTCT
CCACCACAAGCCAGTCCACGGGCGACACTGGGTATGATAGCGGCGGCCAA
GTAGTGATAGGCAGCGAACAAGTGTTTCGGGTCAGCAAGCAGCCCCTGTT
GGCCGTGCATTTGGACCCTGGGTACAGGCGGATCAGTGAGAAAGCCTTCG
TGACGGGGGGACAAGAGGGCAGGCTGGTCTTGGGCCGAAAGGGTTTCTTT
AGCAGCTACCGGGAGGAGACACTGCACGAAAACGAGGGCCCGATCACGGC
GATCGCCTGGCGCGGGTCCCTCGTTGCCTGGGCGAACGAGGAGGGAGTCA
AGGTCCTGGACGTGGAGGGCGAGGAGCGCATCTGCTTCCTCGCGCGTCCT
GAAATCGAAGGCCGGTCCACGGACCTTCGGTGCTCCCTGCTGTGGGAGAG
TGAGACAAGCTTGTTGATCGGGTGGTTCGACACCTTCATGGTCCTGCAGA
TCAAGGCCCGGGCCCCGGGGACGACTCCGGAAAGGCTGCCGCCCGCATCT
GCTGCCTCTTCCTCCCCCGCTTCCTCTTCCTCCTCCGCTTCCTCCTCCTC
CCCGTCGCACCCCTCCTCCGCGCAACGCGGTTCCAGGGTGGGGGAGATGA
CGGTGCGGTGGAAGGCTGATTGTGTGATCAGCGGACTCTGGCCCTTCGAT
GTGGATTCGGTGGCGCTTCTGGGATACGTGAGTCTGGTCGAGGGCGAGGC
AGGTGAGGGAGAGGCGGGCGTCCAGGGCCTGGAAAGGGGTATGGAAAGGC
TAACGACCAGCAGCCAAGATACAACGGATTCCGATCAGGATCCTGTACCG
GGGCAGCCTCCCTCCTCCAAAGTGGTTTGTCGAGCCGAGCTTCAGCTTCG
CAGTCGCCGGGAAGGGCGCCTCTTCTCGGGAGACATCCTGCCCGTGCACG
GAGAAGAGCGAGTCAGGGACTCGCTGGGCTTCTTGTTCGCTTCCAGCTTT
GGCTTGACCTGCCGACGTGTCCCGGGTCCTGGATTGTGGCGCTTGCCTCG
CGGGCTGGGGAGGGCGGGAGGTCTGATTGCCAAGGCCGGTGCGGCTCACG
CAGGGTCTCAAGGCGGCAGTAAGGATGCAACCAGCGCCGGTTGCCACCTG
GCATCGAGGGGCCTGGGCGATGGCGGGGGTGCAGACAGCAGCCACGGGCC
AGGGAGAGGGCAGGACTTGTCAGCGTCCTCCCCCGCCTCGGACACGGGGG
AGAGCTTCATGCCCGTCATGCTCATCGCGGGGCCGGAGGATCTGCTGGTC
GCTCGCGTCCGCGGCGTGGAGGACCGGATCCTGTGGGTGCTGCAGAAGGG
GGCCATGGGTGCGGCCATCGAACTCGCCCTTCTGAATCGACACCTCCTGA
CTCACCAGCGTTTCCACGCCCTGGCCACGTCTTATTTGGAAGTCCTCCTC
GCCCAAGGCGCCTACGGGAGGGCGGCAGCCGAGTGCCCGCGCTTACTTGG
GGAGGAGGCCTCCTCCTGGGAGCGATGGATCTACACATTCGCGGCCCGAC
GACGGCTGGCGTCATTGGCTCCCTTCATACCTTTGGAATCTCCGCGGTTG
AGCCGCAGCACGTACGAAATGGTTTTGAACCACTTTTTGGATTGTGATCG
GGAGGCATTCTTGTCGACCATAAAGAAATGGGGAACACAGCAACAGAAGT
TTGGTCGAGGGGCTAGAGATGAAGGCGGCGTGGAGGGAAGGAGTGGGGGA
CTTTATGATCTTGAAGATCTCAGCAAACGTGTGACGAACATAGTTGCGCA
GGCACCGGACCCGCTACTGTTGCAAGCACACGCATACTTGTTGCAGCGGC
AAGGGAGGTTTGCAGCTTCTTTGGCCGTGTATTGGGATCTCTTTCGCCTT
CTTTCTGCCGCTGCCCGGAGGAGGAGCCCCCGGGGATCGGCGGCGGGCGA
TATGCAGACGCGAAAGCACTTGTTCTCTCCTGTATTTTCAATGATAGAGG
AGCACAACTTCTTCGACGCCGCGGCGGAACGGGTGTCGCTCTTGGTGAAA
ATGGACCGTTCCAAGGCCGCCGATCTGCTCGTACGGTACGTGGATCGCTT
GCCGGTGGCATCCGTGGTGCGGCAGCTCCAGCTGGAGGAACGGGGAGGTG
AGGGAGAAGGCGCCGTCCCGTCCACCGCGCTGGCGGGCCATCCGCAATCA
TCGCATGCTTCGGCCTCTCCCTCCCTTGTGTTGTGGTACTTGGATCTGCT
CTTCAGGCGGCTACCTGACCATTACAACCATCCAGAGTTCGCCCAATTTC
ATGTCTTGCAAGTAGAGCTGTACGCCGCAGCCGCCCCTCCTTTCTGTCCT
GCGCCCGAACGCTCCCACACCAACGCCAAGGATGAAGACACGGTGAAAAT
CAAGGACAGCGGGGCTCACGGGTCGGGTGAGAACGCAAGCGATGAGGAAG
ACGGCGTTGCCGAACCCGCTTACACCTCGGACCTTCTTTCTTTCCTGATG
TGGAGCAACCATGTCCGCCTCGAAACGGCCCTGGCAGCGTGCGAGCGCCG
CCAGCCCCCCTTATACGATGAGATTGTTTACATTCTTAGTCGTATTGGCC
ACAATAAAGAGGCCCTCCGTCTCCTTCTCGTTGAAATCCGCAGCGTCCGG
CGTGCCATCGAATTTGTGGACCGACACGACAAGGGATTGTGGCGGGAGCT
GACCGCCCATTCGTTGCAGCACCCGCGCTTTCTAGCGGGCTTGCTCCGGC
ATGCTGGGAATTACAACGTGGATCTAGCCCGGTCCTTAGTGGAGGACATC
CCCGATGCCATGCGCATCCGGGGGCTGCAGCCAAAGCTATTGAACATCGT
GGCGTCGTATCGCTTCGAGCGCACCTTGCACGAGGAGTCTCGGCGGGTGG
CAGAACACGACTACGTGGCCGCGACCCGGCGCTTTCACCACGCCCAACGA
CGAGCTGTCCGAGTAGACATCCCTCAGAGCCGATGCCAAGGATGCCTGGA
GCCTTTTGCCGGGCCATCGCCCGCCAAACCCCCTCCTGATCTCCCTCCGC
GGGCGCCGGAGTCGGTGGACGTGCGGGAGCTCCATGTCTTCTCGTGTAAG
CACTTCTACCACGATATCTGCTGTCTGGCGGTGGAGCGGCATGGTAGTGC
GCCGGAGGCCGGGAAAGAGGGTGGTAAGACCGTGGGGAGGCAGTCGCCGC
GGCTCCACGAGCGCAGTTATTACAAATTTTACTGTCAGCATTGTCGAGAT
CAAGCGCAGTATGATCTAGCAGAGGGAAAAGTGGGAGGGAAAAAGGGTGG
AATGAAACCCCCCAGGGCTGGGAATAGCGCCGCAATAAAGACATGAGTGG
GAAAAGATGGAAAGGAGGAAGTGCAGGGGCACCTAGGCGCCTAGACAAAA
TGTACAAAGCACTTCGTGCGGAAAGAATCCACATGCCCAATGTAATCGAA
TAAAGAAAAACAAGTAGCCAAAGCCACCCAGCTGCAGCTCGCACGCC back to topprotein sequence of rna829 >rna829-protein ID=rna829-protein|Name=rna829|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MCHCAWKDKGAVSRLDAVPRTASRGFALRRDPCFYFFSQSHSLYLRSTWL
GTMADKKNNPMRELVVEKLILNCCVGESGDRLTRAAKVLEQLSGQTPVYS
KARYTVRSFGIRRNEKISVHVTLRGDKANEILDRGLKVKEYELKKKNFSQ
NGNFGFGITEHIDLGLKYDPSTGIYGMDFYVVLGRKGFRVGRRKLKVGRV
GAPHRVTQKDAIDWFQQKFEGIVLG back to topmRNA from alignment at CM002456.1:517446..519346- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna829 ID=rna829|Name=rna829|organism=Nannochloropsis gaditana|type=mRNA|length=1901bp|location=Sequence derived from alignment at CM002456.1:517446..519346- (Nannochloropsis gaditana)
GTCGAGGGCGAGAAGTGAAGCACCACGGGCGTGTGCATGGGGGCTTGGTA
CCAGGTAGGGATGGCCACACGTCTTTAGTGTTGGATGGAAGGCCATGACC
CTAGTGTCAGAAATGGTGGTTGTTTTGGGTGCTTATTTCGTCTGCCAGAC
TTGGTAACCAACCATTCTCAGCACTGCCGCAGAGAAGGAGGGCGGGGGCG
AAAGAGGGCTTATTTTCTTGGTGTCTACCAGGTTCTTTACTTGAGTAGGA
GTCTTGTTTTGGCATACTGCATATAAATGTGCCACTGTGCATGGAAGGAT
AAAGGGGCTGTCTCGCGTTTGGATGCAGTGCCTCGTACAGCCTCGAGAGG
CTTCGCCTTACGCCGCGACCCATGTTTCTACTTTTTCTCGCAATCGCACA
GCCTTTATCTCCGCAGCACCTGGCTCGGGACGATGGCAGACAAGAAGAAC
AATCCCATGCGGGAGCTTGTGGTACGTTGCGCGGGCGGGTGTCGAATAAA
AGTTAGAAGGGGGGCCATGGAGGCGGGGAGCGGAGGGGGCCTGGAAATGG
ACACGCTGCGTCTTTCTTTCAAGCGTGTGACCGCATGGAGAATGTTGAAT
GAAAAAACATGACGTGAATTTATTGGGTTTTGGGTGGCGTGGGAATAGAC
TGAGTGGGCATCGGCATCTTCGTTGAAATTGATGCGTGAAGTCTTGAAAG
AGCTTCAGATATTCGTGTTCGGGAGATGTAAAGATTTATGTATATATCTT
TACATTGACCCATTTTTTGAGCATCGTGGAAGAACCTGACTCATCGCGCG
TCTCATGTTGAGCTCGAATATGCGTCAGAGGAGCTCCACAATGGAAAGTG
ACGGAGGCTGTGAGGGACGGGTCAGCATGCGTCGCTCATGCATCCGAGCG
TCCCTCCTTGCCTTCCCTCTTCCCTTCTTAGGTGGAGAAATTGATCCTGA
ATTGTTGTGTAGGTGAATCCGGCGATCGCTTGACGCGTGCGGCCAAGGTT
TTGGAGCAGCTTTCCGGGCAGACCCCGGTGTACTCGAAGGCCCGCTACAC
GGTCAGGTCCTTCGGGATCCGGCGTAACGAGAAAATCTCCGTGCACGTGA
CTCTGCGAGGGGATAAGGCCAACGAGATTCTGGACCGCGGCTTGAAGGTG
AAGGAGTACGAGCTTAAGAAGAAGAACTTTTCGCAGAACGGGAACTTCGG
TGAGGCATTGGATGGTGTTGGGATGGTTTTTGGTTGTCGTTTGACAGACA
CGGTATGCGGGTGGGCACAGCGTGCGTGATATTTTTCGTTCGCTTAGCGC
TTTTTCCTTTCGCCCCTGACAGGTTTCGGGATCACTGAGCATATCGACTT
GGGGCTGAAATATGACCCCTCCACTGGCATCTACGGGATGGATTTCTACG
TGGTCCTAGGCCGCAAGGGATTCCGGGTGGGACGCAGAAAGTTGAAGGTG
GGCCGCGTGGGAGCCCCCCACCGGGTCACGCAGAAGGATGCGATTGACTG
GTTCCAGCAGAAATTCGAAGGGATCGGTAGGTGTGGGCGTAGAACAAGGG
CAGGGGATGGTGCGCAAAGGAAGGATTTCGCCGTTTTCTCACTTTCCCTT
GCCGTCCAATGACCATGCGAACAGTGTTGGGCTAGAAGGAAGAGAGCTGT
TTCAAGTACAGCAGACCTGGACAATCGCGCGGGAAAGGAGACGAGATGGA
CGGTATCGCGCTTTATGAGTTAATGGTGATCGCGTTTCCCGCGTGGAAGG
AAGGAGGCGGAGATTGTCATGGCTTACCCCTGTCACAGAAACCGAAGCTG
TGCGGGAGCGTGGGTGGGGGGACATGCTGTGAAGTAGTGGAGACAGCCTC
AAGTGACAGACAAAGAAAAAGATATCACCGTTCTCAACTCAGAGGCATTC
C back to topCoding sequence (CDS) from alignment at CM002456.1:517446..519346- >rna829 ID=rna829|Name=rna829|organism=Nannochloropsis gaditana|type=CDS|length=2712bp|location=Sequence derived from alignment at CM002456.1:517446..519346- (Nannochloropsis gaditana)
TGTTGGGCTAGGTTTCGGGATCACTGAGCATATCGACTTGGGGCTGAAAT
ATGACCCCTCCACTGGCATCTACGGGATGGATTTCTACGTGGTCCTAGGC
CGCAAGGGATTCCGGGTGGGACGCAGAAAGTTGAAGGTGGGCCGCGTGGG
AGCCCCCCACCGGGTCACGCAGAAGGATGCGATTGACTGGTTCCAGCAGA
AATTCGAAGGGATCGGTGGAGAAATTGATCCTGAATTGTTGTGTAGGTGA
ATCCGGCGATCGCTTGACGCGTGCGGCCAAGGTTTTGGAGCAGCTTTCCG
GGCAGACCCCGGTGTACTCGAAGGCCCGCTACACGGTCAGGTCCTTCGGG
ATCCGGCGTAACGAGAAAATCTCCGTGCACGTGACTCTGCGAGGGGATAA
GGCCAACGAGATTCTGGACCGCGGCTTGAAGGTGAAGGAGTACGAGCTTA
AGAAGAAGAACTTTTCGCAGAACGGGAACTTCGATGTGCCACTGTGCATG
GAAGGATAAAGGGGCTGTCTCGCGTTTGGATGCAGTGCCTCGTACAGCCT
CGAGAGGCTTCGCCTTACGCCGCGACCCATGTTTCTACTTTTTCTCGCAA
TCGCACAGCCTTTATCTCCGCAGCACCTGGCTCGGGACGATGGCAGACAA
GAAGAACAATCCCATGCGGGAGCTTGTGTGTTGGGCTAGGTTTCGGGATC
ACTGAGCATATCGACTTGGGGCTGAAATATGACCCCTCCACTGGCATCTA
CGGGATGGATTTCTACGTGGTCCTAGGCCGCAAGGGATTCCGGGTGGGAC
GCAGAAAGTTGAAGGTGGGCCGCGTGGGAGCCCCCCACCGGGTCACGCAG
AAGGATGCGATTGACTGGTTCCAGCAGAAATTCGAAGGGATCGGTGGAGA
AATTGATCCTGAATTGTTGTGTAGGTGAATCCGGCGATCGCTTGACGCGT
GCGGCCAAGGTTTTGGAGCAGCTTTCCGGGCAGACCCCGGTGTACTCGAA
GGCCCGCTACACGGTCAGGTCCTTCGGGATCCGGCGTAACGAGAAAATCT
CCGTGCACGTGACTCTGCGAGGGGATAAGGCCAACGAGATTCTGGACCGC
GGCTTGAAGGTGAAGGAGTACGAGCTTAAGAAGAAGAACTTTTCGCAGAA
CGGGAACTTCGATGTGCCACTGTGCATGGAAGGATAAAGGGGCTGTCTCG
CGTTTGGATGCAGTGCCTCGTACAGCCTCGAGAGGCTTCGCCTTACGCCG
CGACCCATGTTTCTACTTTTTCTCGCAATCGCACAGCCTTTATCTCCGCA
GCACCTGGCTCGGGACGATGGCAGACAAGAAGAACAATCCCATGCGGGAG
CTTGTGTGTTGGGCTAGGTTTCGGGATCACTGAGCATATCGACTTGGGGC
TGAAATATGACCCCTCCACTGGCATCTACGGGATGGATTTCTACGTGGTC
CTAGGCCGCAAGGGATTCCGGGTGGGACGCAGAAAGTTGAAGGTGGGCCG
CGTGGGAGCCCCCCACCGGGTCACGCAGAAGGATGCGATTGACTGGTTCC
AGCAGAAATTCGAAGGGATCGGTGGAGAAATTGATCCTGAATTGTTGTGT
AGGTGAATCCGGCGATCGCTTGACGCGTGCGGCCAAGGTTTTGGAGCAGC
TTTCCGGGCAGACCCCGGTGTACTCGAAGGCCCGCTACACGGTCAGGTCC
TTCGGGATCCGGCGTAACGAGAAAATCTCCGTGCACGTGACTCTGCGAGG
GGATAAGGCCAACGAGATTCTGGACCGCGGCTTGAAGGTGAAGGAGTACG
AGCTTAAGAAGAAGAACTTTTCGCAGAACGGGAACTTCGATGTGCCACTG
TGCATGGAAGGATAAAGGGGCTGTCTCGCGTTTGGATGCAGTGCCTCGTA
CAGCCTCGAGAGGCTTCGCCTTACGCCGCGACCCATGTTTCTACTTTTTC
TCGCAATCGCACAGCCTTTATCTCCGCAGCACCTGGCTCGGGACGATGGC
AGACAAGAAGAACAATCCCATGCGGGAGCTTGTGTGTTGGGCTAGGTTTC
GGGATCACTGAGCATATCGACTTGGGGCTGAAATATGACCCCTCCACTGG
CATCTACGGGATGGATTTCTACGTGGTCCTAGGCCGCAAGGGATTCCGGG
TGGGACGCAGAAAGTTGAAGGTGGGCCGCGTGGGAGCCCCCCACCGGGTC
ACGCAGAAGGATGCGATTGACTGGTTCCAGCAGAAATTCGAAGGGATCGG
TGGAGAAATTGATCCTGAATTGTTGTGTAGGTGAATCCGGCGATCGCTTG
ACGCGTGCGGCCAAGGTTTTGGAGCAGCTTTCCGGGCAGACCCCGGTGTA
CTCGAAGGCCCGCTACACGGTCAGGTCCTTCGGGATCCGGCGTAACGAGA
AAATCTCCGTGCACGTGACTCTGCGAGGGGATAAGGCCAACGAGATTCTG
GACCGCGGCTTGAAGGTGAAGGAGTACGAGCTTAAGAAGAAGAACTTTTC
GCAGAACGGGAACTTCGATGTGCCACTGTGCATGGAAGGATAAAGGGGCT
GTCTCGCGTTTGGATGCAGTGCCTCGTACAGCCTCGAGAGGCTTCGCCTT
ACGCCGCGACCCATGTTTCTACTTTTTCTCGCAATCGCACAGCCTTTATC
TCCGCAGCACCTGGCTCGGGACGATGGCAGACAAGAAGAACAATCCCATG
CGGGAGCTTGTG back to top
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