rna8283, rna8283 (mRNA) Nannochloropsis gaditana

Overview
Namerna8283
Unique Namerna8283
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1455
Alignment locationKK037248.1:273078..274450 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g95.3414.mrna
Orig protein idgnl|cribi|Naga_100011g95.3414
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:273078..274450 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100011g95gene8023Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8283rna8283-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22414.1cds8259Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8283 ID=rna8283|Name=rna8283|organism=Nannochloropsis gaditana|type=mRNA|length=1455bp
GCGTGCCATCTAAATTTCTAGCACACGAGTCAGCCAAAGCTCTCCCTTTT
CTCGGACGCGTGTGTGTTGACTGTAGCATCACAGCCCTATGCAGTATTTA
TGGAGCGGGTTTCCACATTGCTCGTGCTTGCTCGCCTGGGCTTTTTAACG
ACTTACATCATGCCGTCTCCCTTTCGCCCCCGCCGTACCCCTTTGTCCTA
GTCTGTTTGACATTCTATCATACATTCACAGGCTATCATGCATGGCCGAC
GTAAAGACGAATATCAAAGAACACACCTGGCGCGGAGCCAGGCCGAAAAA
GAAGCTGCGAAAAACAAAGTATTCAAGTACAAACAACTTATGGAGCTGGC
CTTGCAGCAGCGACAGGAAATGAGACATTGTAAGGAGGCGTTGGTAACCG
GAGAGGCCCTGGATAACGACTTGGTATTGTCATCACAGTTGCTCAGAATA
AATCCAGACGTATACACGTTATGGAATCACCGGAAAGAGATGATCGTGGC
ATCTGGGGTCCTTCGGCAAGAGGCAGAGGGTGGAGAGACAGAGAAAGAAG
AGTGTGAAAGCGAAAGGGAGGGAGGCAAAGCGCCTCTACCCCCGGGGTCA
TTTTTACAAACGGAACTCGATCTAGTGATCGATTGTATTCGCAAGAATCC
AAAGTCATATGGTGCCTGGCACCATCGCCGCTGGCTCTTGGATCATGCCT
TCTCGCTTAGCCCCTCCGCAGCCCCACCCAATCCTTCCAGTCCTGTGGCT
CCTCTACCCGCCTTGTCGCGCCAACTCAAGCCTGTCCTTGACCAAGAACT
CTTTCTCTGTGCCAAGCTACTCGATCTGGACGAGCGCAACTTCCATTGCT
GGAGTTATCGGCGGTGGGTGGTCAGCAAGCACCCGGCACGGACCCCGCGA
GATGAGTTCGAGTTCTCTACCTCGCGGATTCTGAAAAATTTCAGCAATTA
CTCAGCTTTTCACCACCGTGCATCATATTTTTGGGACTACTTGCGTGAAG
CACATCCAAATTTAGATCCCCCTTCCTTCCTGGAGAGGGAGCTGGACATG
GTGCAACAAGCCGTGTTCACGGAGCCGGACGACCAGACCGCCTGGTGGTA
CCACCAGCATTTGATCTCCCTGGCATTGGCATGGGATACAGAGCGGGAGA
AAGAGCTCGGGGAGCGGGGCGACCAGGAATTAACGCCGCGGGGTGTCTCG
TTCGCTCAAAGAGTACTCGAGAAGGAAGTCAAGGTTTTACGGGAACTGGT
AGAGGAGGGGGAGGCGGAGGGGGGGGGCTATCGATGGGCGGTGCTTACAC
TGGCAGATTTGTTGGGAAAGCTGGCGCGCAGGAAGGAAGGAAAGAGCGAG
GAGGCATCTTTGCGGGCTGAGAGTCAGAAGTTGCTGAAGAGGCTCCCCGC
CCTTGACCCCGACCACGCGGGTCGCTACCAAGACATGCTCGACTCGCTGC
CTTGA
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protein sequence of rna8283

>rna8283-protein ID=rna8283-protein|Name=rna8283|organism=Nannochloropsis gaditana|type=polypeptide|length=275bp
MEDRTLIPVRTIFTIEELLEAEDAELWLFRTPLDFNAEYLVKSKLKIDED
AVIGSVLRAIKEDGEVDGHSGTGDVLADSLSRELGPSYEVLLGDPAESKA
YRVLLQAGEDDPGVLKIAPPFTRHIVVAQRPFEAGHLSSPGPSTPPSEGN
EDLQSDTELALKRKARHDIARIVVPYSHVPQVEGLQVRFKPLGAGSVPPP
PLWSKEGEGEEKRGKSRGSPYLGRDRKAGLTKQEVEGGAVCGKRGLEEVE
RGEIRVSSKEKRQKSRKESSKRRIV
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mRNA from alignment at KK037248.1:273078..274450-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8283 ID=rna8283|Name=rna8283|organism=Nannochloropsis gaditana|type=mRNA|length=1373bp|location=Sequence derived from alignment at KK037248.1:273078..274450- (Nannochloropsis gaditana)
GCTACCAGCCTTATCTGTGTGATATAAGCAAGACAGTGAGGTAAAATCTA
GAGGACCGTTCAATGTGAGCATGGCTTGGGTTGCTATCTTCCTTTTCCTT
CCTGTGTCCGGAGGTTTTGTCCGCGACCTCCGAGGTCCGCCTCGCCATCC
GTGAGGAGCTCCTCTTCACCTTGAGCATCCAGGCATGCCCACGACTTAAA
AGTAAATCTCACCGCATTGACTCGGAACACCGGGACACACATGCAGTGCT
CGTACAAGGCCTGGACATGGAAGACCGCACTTTGATTCCTGTCAGGTAAG
CAGGAGCTTCCTGAGGTATGCTGACTGCACATAAACATGCTCCGGCATGT
GGCAGCCGAAGCGCTATGTTAATTTCTACCAGTTCCTGACACGACGTTTT
GTCCACCCGAGAGCAGGACGATCTTCACGATAGAAGAGCTACTAGAAGCA
GAAGATGCGGAGCTGTGGCTTTTTCGCACGCCGCTCGACGTAAGTAAACC
GCCCGGTCTGATAAACCTCCTCGCTTTCCTTCATTGCCTTATTCCATTTT
GTGATTTTTTACGAAAACCCATCACAGTTCAACGCAGAATATCTTGTCAA
AAGCAAACTTAAGATTGATGAGGACGCGGTGATAGGCTCTGTTTTACGTG
CCATAAAAGAGGATGGAGAAGTGGACGGACACTCCGGAACCGGAGACGTC
CTAGCCGACAGTCTATCTAGAGAATTAGGGCCAAGCTACGAGGTGCTATT
GGGCGATCCTGCTGAAAGCAAAGCATACCGCGTACTTTTGCAGGCAGGAG
AGGATGACCCGGGTGTGCTGAAGATAGCGCCACCCTTCACTCGCCACATA
GTTGTAGCCCAGCGCCCTTTTGAAGCTGGACATCTCTCCTCTCCTGGCCC
TTCTACTCCACCTTCCGAGGGGAACGAAGACTTGCAGTCAGACACAGAGC
TCGCTTTAAAAAGAAAAGCTAGGCACGATATTGCTCGCATTGTTGTTCCC
TACTCGCATGTGCCGCAGGTAGAGGGTTTGCAGGTGCGGTTTAAGCCTTT
GGGAGCGGGGAGTGTCCCCCCACCCCCCTTGTGGTCGAAAGAGGGCGAGG
GTGAAGAGAAAAGAGGGAAGAGCAGAGGCTCGCCTTATTTAGGACGGGAC
CGAAAGGCAGGGCTCACCAAGCAAGAGGTGGAGGGCGGGGCAGTTTGCGG
GAAGAGAGGTCTAGAGGAGGTGGAACGTGGCGAGATTAGAGTCTCGTCTA
AAGAGAAGAGACAGAAAAGCCGGAAGGAATCATCCAAGCGCCGAATTGTA
TAGTTACAGTAATCGTTTGAAGATGGTATAGCTGACAAAAGTCATCAAGC
AACGCCGTGAAAAGGCTTGAAAA
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Coding sequence (CDS) from alignment at KK037248.1:273078..274450-

>rna8283 ID=rna8283|Name=rna8283|organism=Nannochloropsis gaditana|type=CDS|length=2484bp|location=Sequence derived from alignment at KK037248.1:273078..274450- (Nannochloropsis gaditana)
TTCAACGCAGAATATCTTGTCAAAAGCAAACTTAAGATTGATGAGGACGC
GGTGATAGGCTCTGTTTTACGTGCCATAAAAGAGGATGGAGAAGTGGACG
GACACTCCGGAACCGGAGACGTCCTAGCCGACAGTCTATCTAGAGAATTA
GGGCCAAGCTACGAGGTGCTATTGGGCGATCCTGCTGAAAGCAAAGCATA
CCGCGTACTTTTGCAGGCAGGAGAGGATGACCCGGGTGTGCTGAAGATAG
CGCCACCCTTCACTCGCCACATAGTTGTAGCCCAGCGCCCTTTTGAAGCT
GGACATCTCTCCTCTCCTGGCCCTTCTACTCCACCTTCCGAGGGGAACGA
AGACTTGCAGTCAGACACAGAGCTCGCTTTAAAAAGAAAAGCTAGGCACG
ATATTGCTCGCATTGTTGTTCCCTACTCGCATGTGCCGCAGGTAGAGGGT
TTGCAGGTGCGGTTTAAGCCTTTGGGAGCGGGGAGTGTCCCCCCACCCCC
CTTGTGGTCGAAAGAGGGCGAGGGTGAAGAGAAAAGAGGGAAGAGCAGAG
GCTCGCCTTATTTAGGACGGGACCGAAAGGCAGGGCTCACCAAGCAAGAG
GTGGAGGGCGGGGCAGTTTGCGGGAAGAGAGGTCTAGAGGAGGTGGAACG
TGGCGAGATTAGAGTCTCGTCTAAAGAGAAGAGACAGAAAAGCCGGAAGG
AATCATCCAAGCGCCGAATTGTATAGGACGATCTTCACGATAGAAGAGCT
ACTAGAAGCAGAAGATGCGGAGCTGTGGCTTTTTCGCACGCCGCTCGACA
TGGAAGACCGCACTTTGATTCCTGTCAGTTCAACGCAGAATATCTTGTCA
AAAGCAAACTTAAGATTGATGAGGACGCGGTGATAGGCTCTGTTTTACGT
GCCATAAAAGAGGATGGAGAAGTGGACGGACACTCCGGAACCGGAGACGT
CCTAGCCGACAGTCTATCTAGAGAATTAGGGCCAAGCTACGAGGTGCTAT
TGGGCGATCCTGCTGAAAGCAAAGCATACCGCGTACTTTTGCAGGCAGGA
GAGGATGACCCGGGTGTGCTGAAGATAGCGCCACCCTTCACTCGCCACAT
AGTTGTAGCCCAGCGCCCTTTTGAAGCTGGACATCTCTCCTCTCCTGGCC
CTTCTACTCCACCTTCCGAGGGGAACGAAGACTTGCAGTCAGACACAGAG
CTCGCTTTAAAAAGAAAAGCTAGGCACGATATTGCTCGCATTGTTGTTCC
CTACTCGCATGTGCCGCAGGTAGAGGGTTTGCAGGTGCGGTTTAAGCCTT
TGGGAGCGGGGAGTGTCCCCCCACCCCCCTTGTGGTCGAAAGAGGGCGAG
GGTGAAGAGAAAAGAGGGAAGAGCAGAGGCTCGCCTTATTTAGGACGGGA
CCGAAAGGCAGGGCTCACCAAGCAAGAGGTGGAGGGCGGGGCAGTTTGCG
GGAAGAGAGGTCTAGAGGAGGTGGAACGTGGCGAGATTAGAGTCTCGTCT
AAAGAGAAGAGACAGAAAAGCCGGAAGGAATCATCCAAGCGCCGAATTGT
ATAGGACGATCTTCACGATAGAAGAGCTACTAGAAGCAGAAGATGCGGAG
CTGTGGCTTTTTCGCACGCCGCTCGACATGGAAGACCGCACTTTGATTCC
TGTCAGTTCAACGCAGAATATCTTGTCAAAAGCAAACTTAAGATTGATGA
GGACGCGGTGATAGGCTCTGTTTTACGTGCCATAAAAGAGGATGGAGAAG
TGGACGGACACTCCGGAACCGGAGACGTCCTAGCCGACAGTCTATCTAGA
GAATTAGGGCCAAGCTACGAGGTGCTATTGGGCGATCCTGCTGAAAGCAA
AGCATACCGCGTACTTTTGCAGGCAGGAGAGGATGACCCGGGTGTGCTGA
AGATAGCGCCACCCTTCACTCGCCACATAGTTGTAGCCCAGCGCCCTTTT
GAAGCTGGACATCTCTCCTCTCCTGGCCCTTCTACTCCACCTTCCGAGGG
GAACGAAGACTTGCAGTCAGACACAGAGCTCGCTTTAAAAAGAAAAGCTA
GGCACGATATTGCTCGCATTGTTGTTCCCTACTCGCATGTGCCGCAGGTA
GAGGGTTTGCAGGTGCGGTTTAAGCCTTTGGGAGCGGGGAGTGTCCCCCC
ACCCCCCTTGTGGTCGAAAGAGGGCGAGGGTGAAGAGAAAAGAGGGAAGA
GCAGAGGCTCGCCTTATTTAGGACGGGACCGAAAGGCAGGGCTCACCAAG
CAAGAGGTGGAGGGCGGGGCAGTTTGCGGGAAGAGAGGTCTAGAGGAGGT
GGAACGTGGCGAGATTAGAGTCTCGTCTAAAGAGAAGAGACAGAAAAGCC
GGAAGGAATCATCCAAGCGCCGAATTGTATAGGACGATCTTCACGATAGA
AGAGCTACTAGAAGCAGAAGATGCGGAGCTGTGGCTTTTTCGCACGCCGC
TCGACATGGAAGACCGCACTTTGATTCCTGTCAG
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Synonyms
Publications