EWM22414.1, cds8259 (CDS) Nannochloropsis gaditana

Overview
NameEWM22414.1
Unique Namecds8259
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:274156..274184 -
Alignment locationKK037248.1:273962..274034 -
Alignment locationKK037248.1:273148..273873 -

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Properties
Property NameValue
Protein idEWM22414.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g95.3414.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:274156..274184 -
KK037248.1supercontigKK037248.1:273962..274034 -
KK037248.1supercontigKK037248.1:273148..273873 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
Homology
[Close]
BLAST of EWM22414.1 vs. NCBI_GenBank
Match: gi|585102920|gb|EWM22414.1| (hypothetical protein Naga_100011g95 [Nannochloropsis gaditana])

HSP 1 Score: 545.428 bits (1404), Expect = 0.000e+0
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0 
Query:    1 MEDRTLIPVRTIFTIEELLEAEDAELWLFRTPLDFNAEYLVKSKLKIDEDAVIGSVLRAIKEDGEVDGHSGTGDVLADSLSRELGPSYEVLLGDPAESKAYRVLLQAGEDDPGVLKIAPPFTRHIVVAQRPFEAGHLSSPGPSTPPSEGNEDLQSDTELALKRKARHDIARIVVPYSHVPQVEGLQVRFKPLGAGSVPPPPLWSKEGEGEEKRGKSRGSPYLGRDRKAGLTKQEVEGGAVCGKRGLEEVERGEIRVSSKEKRQKSRKESSKRRIV 275
            MEDRTLIPVRTIFTIEELLEAEDAELWLFRTPLDFNAEYLVKSKLKIDEDAVIGSVLRAIKEDGEVDGHSGTGDVLADSLSRELGPSYEVLLGDPAESKAYRVLLQAGEDDPGVLKIAPPFTRHIVVAQRPFEAGHLSSPGPSTPPSEGNEDLQSDTELALKRKARHDIARIVVPYSHVPQVEGLQVRFKPLGAGSVPPPPLWSKEGEGEEKRGKSRGSPYLGRDRKAGLTKQEVEGGAVCGKRGLEEVERGEIRVSSKEKRQKSRKESSKRRIV
Sbjct:    1 MEDRTLIPVRTIFTIEELLEAEDAELWLFRTPLDFNAEYLVKSKLKIDEDAVIGSVLRAIKEDGEVDGHSGTGDVLADSLSRELGPSYEVLLGDPAESKAYRVLLQAGEDDPGVLKIAPPFTRHIVVAQRPFEAGHLSSPGPSTPPSEGNEDLQSDTELALKRKARHDIARIVVPYSHVPQVEGLQVRFKPLGAGSVPPPPLWSKEGEGEEKRGKSRGSPYLGRDRKAGLTKQEVEGGAVCGKRGLEEVERGEIRVSSKEKRQKSRKESSKRRIV 275
[Close]
BLAST of EWM22414.1 vs. NCBI_GenBank
Match: gi|298710202|emb|CBJ26277.1| (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 59.6918 bits (143), Expect = 6.825e-7
Identity = 55/184 (29.89%), Postives = 73/184 (39.67%), Query Frame = 0 
Query:   18 LLEAEDAELWLFRTPLDFNAEYLVKSKLKIDEDAVIGSVL-----RAIKEDGEVDGHSGTGDVLADSLSRELGPSYEVLLGDPAESKAYRVLLQAGEDDPGVLKIAPPFTRHIVVAQRPFEAGHLSSPGPSTPPSEGNEDLQSDTELALKRKARHDIARIVVPYSHVPQVEGLQVRFKPLGAGS 196
            L E +   LWL R P   +   L   K+K+      G VL     R   EDG+ D   G  D          G    +  GD AE+  +R L  A ED  G L  APPF   +          ++S   P    S  + D + DT               V PY   PQ++G++VR+KP  AGS
Sbjct:   16 LSEVQGKRLWLLRVPRHIDTSRLEGVKVKLPRKGREGKVLGRANKRNDSEDGDSDEEGGNRD----------GEDLALRAGDVAETHGFRALFSAKED--GALAAAPPFVGQV----------NVSVDMPDVDASVADGDPRVDT--------------FVEPYQGRPQLKGMRVRYKPARAGS 163
The following BLAST results are available for this feature:
BLAST of EWM22414.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102920|gb|EWM22414.1|0.000e+0100.00hypothetical protein Naga_100011g95 [Nannochlorops... [more]
gi|298710202|emb|CBJ26277.1|6.825e-729.89expressed unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8283rna8283Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications