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Properties
| Property Name | Value |
|---|
| Product | phd finger-like domain-containing protein 5a |
| Orig transcript id | gnl|cribi|Naga_100011g80.3425.mrna |
| Orig protein id | gnl|cribi|Naga_100011g80.3425 |
| Gene | Rds3 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:231801..233195 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8268 ID=rna8268|Name=rna8268|organism=Nannochloropsis gaditana|type=mRNA|length=1030bp
GGCGAGCAAGAGCGTCCCAGTTGGGGGGAGGTTATCCTTGCTGCGTACAA
AGTATCGACGTCTTTAACGATACCTTACCCTGCTTCGCTCCGACAAAGCA
GAAAAATGATTTATAGAGACAAAGTGTCGAATTATGAAAATGTCGACGGC
GATGGGGAGCAAGACTTGACCGCGCTTGGGTTTTTGTTCGATGCGGCGGC
CGCCAAGGCGTGGGTACGGCATAAATTTCAAGCCCCAACGACCGGCCCTT
TTGATTGCCATGCCGAAGATAAGGATCTGAGAAGCTCGATTGAGGTAGAA
GTACAAGTTATAGCCGACGAAGATGGACCAGGAGCCCTGCAAACAGGCCA
GCGTACGTGGCCAGCAGCGCCCTTTTTAGCCCAATACCTAGTCGAGCACT
GGGCTGGAATAACATTTGATCGCAAGTGCGAGGTCCTGGAGCTAGGGGCT
GGTTGTGGACTGGTGGGACTTACTCTGGCGCAGCTTTCTGGTGTCGATAC
CATCATTATGACAGATCATGATCCCGGTTCCTTGAAGCTGATCCAGGAGG
GCATATTTCGTAATCAACATCGGTGGCGTGACGGAGTGCGTTGTGAAATA
TCGCACATGGAATGGGGGAAAGAACTCAATCGACAGATAGTGTCACTCGT
AAACATAGAACGCGTCAATGCAGAACATGGCAGTTGCAAGGAAGGCATCA
TGCTTCTCCTCGTAGGCAGTGACCTAGTGTATAGTTTGGACGTGGTGGAA
AGCTTGTTCAAGACTGTGGCAGACCTGTTTCGTCATCGAGACGAGAGCGG
AAGAGGCAGAGGCCAGTTTCTGCTCTGCGGAAGCTTCGCATTAGGCGATG
AAATAGAAAAGAGGGTTGCGGAGGTGACGGAGAGGCTGAAGCTTTGCACT
GAAAGGTTAATTCTTGGCAGAGAGGATGAGAGGAGGGGCATGTGGATAAC
TAAATATAACCTAGCTTAGTGTTCATGCCAATTAGAAATCAGAGAAAATC
ACTTCGTTCTGCAGGTTGCCAATCCTCTGC back to topprotein sequence of rna8268 >rna8268-protein ID=rna8268-protein|Name=rna8268|organism=Nannochloropsis gaditana|type=polypeptide|length=110bp
MAKHHADLVMCRKQPGIAIGRLCEKCDGKCVICDSYVRPSTLVRICDECN
YGSYEGRCVICGGPGISDAYYCRECTQEEKDRDGCPKIVNLGASKTDLFY
ERKKYGFKRR back to topmRNA from alignment at KK037248.1:231801..233195+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8268 ID=rna8268|Name=rna8268|organism=Nannochloropsis gaditana|type=mRNA|length=1395bp|location=Sequence derived from alignment at KK037248.1:231801..233195+ (Nannochloropsis gaditana)
CCGCGGCCTCACGTTTTCGATAGCGAGCCTTTTGCTACTTCTCATGAACC
TATGCAAAGCTTGCAACACTTAGCCGTCATCTTCTGACACCTTACACGGG
TTGGAACCCTCCGTGTCGCGCACGCCACGTCGTTTTCGGCAAATGAGTAG
TATGGCCGGTGGTACGGTTCAGGCTGATGAAACAAAATGTTTATTTCACA
TCCTCTCATTTGGTCTTTTAATCTCGAAACGTTTACGAAGCTAATCAGGT
CGACCGTGATTCTTCTTCTCGGAATATATTCTTGTTTTAGATGGCCAAGC
ACCATGCAGGTACGTCGTTGCTTATTTGGTGACCGAGAGCGGAGAGGAAC
AACTAGCTGCCTCAACCCATCCTGCTGGGATCAGAAAAATACTAACTGGT
GTTTTCTTGAACATGTGCAATAGATCTGGTAATGTGCCGGAAGCAGCCGG
GTATTGCTATCGGTCGATTATGTGAAAAGGTGAGTCTTGCTGGATAAGAG
TTTCAAAACGATGAAGACCGGTAAACGCACTCATTTGAGCAACACTTACG
GTGCATCTTCATTAATCACTCATACAGTGCGACGGAAAATGTGTCATTTG
TGATAGTTACGTCCGACCCTCCACCCTAGTCCGGATTTGCGACGAGTGTA
AGTTGTATGGTTCGAGAAGTCGTATGGATACGTGTGGCGGACTCGGACTT
GTGGACTTTGCTCCTTCTCGGCAAGTTTTGGACGTAAAGATTGTATTTCT
TATATATTTCGGTAATCGCAACTAAAATTCTTAGGCAACTACGGCTCTTA
CGAGGGTCGATGCGTGATATGTGGCGGGCCAGGCATTTCAGACGCTTACT
ATTGCCGGGAGTGCACgcaagaagagaaagacCGCGACGGCTGCCCTAAG
ATCGTTAATCTCGGCGCTTCTAAGACAGATCTGTTCTACGAGCGAAAAAA
ATACGGTTTCAAAAGGTACGTTCTCGAGGATCGCGTTACGTGTCGAGGGA
ATGTAATGCTTTGCGACTGTAACGGGTTATTTTTGAGATGCTTAACATTA
TCTCGTCACAATATTCGTCAGCAAGTACCTTATAACCTTTTGGTATCGTA
TTTGGTTTAATTTTACGTAGGCGATGACGGGACTGAAGCCTGCCTGTTGG
TGAAATGCGTGGATGGAAACGTGTACAGGATAAGGGACGTGGATGGGGTG
TTGCGCGAAAAAGTGCCATGGCAGGCTGCGGACTTGCTTCTCCTCGCGAG
GTattggggggagggggagagattCTAAAACTGAAAGCATTCATTTTTAA
TTTATAGCTCCTTTTCGAGGAGAATTAGCCTCTCCATTGCCGTCGACTTT
GATCTTTCCTTTGCCATGGTACCTCCTCGAGCGAGAAACACCCCC back to topCoding sequence (CDS) from alignment at KK037248.1:231801..233195+ >rna8268 ID=rna8268|Name=rna8268|organism=Nannochloropsis gaditana|type=CDS|length=1665bp|location=Sequence derived from alignment at KK037248.1:231801..233195+ (Nannochloropsis gaditana)
ATGGCCAAGCACCATGCAGATCTGGTAATGTGCCGGAAGCAGCCGGGTAT
TGCTATCGGTCGATTATGTGAAAAGTGCGACGGAAAATGTGTCATTTGTG
ATAGTTACGTCCGACCCTCCACCCTAGTCCGGATTTGCGACGAGTGCAAC
TACGGCTCTTACGAGGGTCGATGCGTGATATGTGGCGGGCCAGGCATTTC
AGACGCTTACTATTGCCGGGAGTGCACgcaagaagagaaagacCGCGACG
GCTGCCCTAAGATCGTTAATCTCGGCGCTTCTAAGACAGATCTGTTCTAC
GAGCGAAAAAAATACGGTTTCAAAAGGCGATGAATGGCCAAGCACCATGC
AGATCTGGTAATGTGCCGGAAGCAGCCGGGTATTGCTATCGGTCGATTAT
GTGAAAAGTGCGACGGAAAATGTGTCATTTGTGATAGTTACGTCCGACCC
TCCACCCTAGTCCGGATTTGCGACGAGTGCAACTACGGCTCTTACGAGGG
TCGATGCGTGATATGTGGCGGGCCAGGCATTTCAGACGCTTACTATTGCC
GGGAGTGCACgcaagaagagaaagacCGCGACGGCTGCCCTAAGATCGTT
AATCTCGGCGCTTCTAAGACAGATCTGTTCTACGAGCGAAAAAAATACGG
TTTCAAAAGGCGATGAATGGCCAAGCACCATGCAGATCTGGTAATGTGCC
GGAAGCAGCCGGGTATTGCTATCGGTCGATTATGTGAAAAGTGCGACGGA
AAATGTGTCATTTGTGATAGTTACGTCCGACCCTCCACCCTAGTCCGGAT
TTGCGACGAGTGCAACTACGGCTCTTACGAGGGTCGATGCGTGATATGTG
GCGGGCCAGGCATTTCAGACGCTTACTATTGCCGGGAGTGCACgcaagaa
gagaaagacCGCGACGGCTGCCCTAAGATCGTTAATCTCGGCGCTTCTAA
GACAGATCTGTTCTACGAGCGAAAAAAATACGGTTTCAAAAGGCGATGAA
TGGCCAAGCACCATGCAGATCTGGTAATGTGCCGGAAGCAGCCGGGTATT
GCTATCGGTCGATTATGTGAAAAGTGCGACGGAAAATGTGTCATTTGTGA
TAGTTACGTCCGACCCTCCACCCTAGTCCGGATTTGCGACGAGTGCAACT
ACGGCTCTTACGAGGGTCGATGCGTGATATGTGGCGGGCCAGGCATTTCA
GACGCTTACTATTGCCGGGAGTGCACgcaagaagagaaagacCGCGACGG
CTGCCCTAAGATCGTTAATCTCGGCGCTTCTAAGACAGATCTGTTCTACG
AGCGAAAAAAATACGGTTTCAAAAGGCGATGAATGGCCAAGCACCATGCA
GATCTGGTAATGTGCCGGAAGCAGCCGGGTATTGCTATCGGTCGATTATG
TGAAAAGTGCGACGGAAAATGTGTCATTTGTGATAGTTACGTCCGACCCT
CCACCCTAGTCCGGATTTGCGACGAGTGCAACTACGGCTCTTACGAGGGT
CGATGCGTGATATGTGGCGGGCCAGGCATTTCAGACGCTTACTATTGCCG
GGAGTGCACgcaagaagagaaagacCGCGACGGCTGCCCTAAGATCGTTA
ATCTCGGCGCTTCTAAGACAGATCTGTTCTACGAGCGAAAAAAATACGGT
TTCAAAAGGCGATGA back to top
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