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Properties
| Property Name | Value |
|---|
| Product | luminal binding protein |
| Orig transcript id | gnl|cribi|Naga_100011g70.3457.mrna |
| Orig protein id | gnl|cribi|Naga_100011g70.3457 |
| Gene | HSP |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:206817..209730 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8259 ID=rna8259|Name=rna8259|organism=Nannochloropsis gaditana|type=mRNA|length=1905bp
GAGGCGGACACGTTGGGAAGGCTCGCCAAGGGAAGGGAAGCGACTCGCTC
GGAGGGAGTTCGAATATGGCTATGGGTCCGTCCCCTCTCTTTACCCATCC
CACTTTTTCACGGGCATGCAACCGAATGGCGTACCCTAAAATCCGTCTTC
AACTCTGATGAGTTGCTTTTGAGTCGTGGCAATTTTTTGCCTAGTCAATT
GAATATTGCTTTGCGGAAAGAGAGGCAAAAGAAGAAAGTTTTGGAAGATG
CAGGCCGGGCGAAATCGATTTGTCATGCTTATCGATAATCAATAATAAGC
ACGACTTGCATGGCTAATTTCCCTTTTTTCTTGTCACAACAAAGCATAAT
TGTTGGATAATTATGCTTGGCACCGGCGCGCGCATGCGCAAGAAGTCCAA
TCCTAATGGCAAGATAAAAACGACCTGCACTCGGGGCCTGGGCTTCGTAG
CCATTGTGGGGTTCAGTTGGGGACTTTTTATCCTAACACGCCTCGCAGGG
CCGGTCTTGGCGCCCATTTCGCGCGAAGGCAGTGAGAATCGCAACGCGCT
TGACACATTGGCGTCCGTGCCGCCTGCTAAGAACGACCCTTCGATGTGGC
AGTGGAACGAGGCCCCGGAGGACGACCGCCTCTACCTGGTCTTCTCCACG
GACTGCTCGGGTTATCAAAACTGGCAATCCCTTGCTGTATTCTTCACTGC
TGATGCCGTTCGACAGCCAGGGACGATCGTGCGCATCGCGAGTGGGTGCT
CAGAGGCCGAGAAGAAGGAGGTCCAGAAGCTCTACGACACATTTCCCGTC
CGCTTTCAGGTGCATTTCACCCCCAATTTCAAAAAGGACGCCAAGAGTGG
CAAGTCATATGACTTCTACAATAAACCGTATGGTCTTCAACATTGGTTGG
ACAGCAAAGCAGCTCCGAAGCATAAGGACGCCATCGTCGCGCTGCTCGAC
CCAGACTTCCTCTTCATGCGTCCTCTCACGTACAAAGTGAAACAAGACAG
GGTGCTCTACTCCCCTCCGGTCACTGACGGGGACCTCATCGACGAAGTTC
GCGAGGGTCATCCAGTCGCGCAATATTACGGCATCGGCTCGCAATGGACC
AAGTTTAAAGTCGAGTACATCGCGGGCAAGGACTCGCCAGCCTCGAAAGT
GAGCATCTCGGACGCGAGCCGCTACTACTCCGTGGGAGCTCCCTACATCG
CTCACGTCAAGGACATGCGCAAGATCGCTGAGAGCTGGGCCAACTTCGTC
CCCAGGGTCTATGAGGAGTACCCTCACCTGCTCGCCGAGATGTACGCCTA
CTCCATCGCCGCCGCCCACCTGGAGCTCCCGCACCTGCGCCTGGACCACT
ACATGGTGAGCAATACCCAGGCCGCGGGGGAGGGATGGCCCTTTGTTGAC
AGGCTTACGGACAAGTACGTTTGCAGCGCCGAGGCGCCCGATCAGGGGCA
GGAGCAGCCGGTCTTCCTGCACTACTGCCAGTTCTACCGCGTCGAGCACT
GGGGGTTCCACAAGCGGCGAGTGGCCACTAACCTATTCACGTGCAAGAGT
CCCCTGTTCATAATGCCCCCCGAGGACCTGGAGGACACGCATTGGAAGGA
CAATGGGGACAAGAAGACGATGTACTCCAAGCAGGAGGCCCAGCGCGCTG
CATACATGTTGTGCAACGTGATCAGGAAGCTGAATGGGGCTGCAGTCAAG
TTCAAAAATCTGAACTGTTTAGCGGGCTCGGCAAATTACACTCAGGAAAT
CAAGATTTGGTAAAAAAGGGTATGGCAGCAAAGCTTCGAAACTTCAAGGC
CTGAAGCATAAATGAAATGCGCGACAAATACCGGTCGGTCTCAATATATC
ACCGACTGAGAAAAGAGTTTAAAGTATACAATATTAGAAAACAGGTTTGC
GTCTC back to topprotein sequence of rna8259 >rna8259-protein ID=rna8259-protein|Name=rna8259|organism=Nannochloropsis gaditana|type=polypeptide|length=664bp
MQRVRSWVAGALVTVGLMMASSLGSVKAEDEPLGTVIGIDLGTTYSCVGV
FKNGRVEIIQNDQGNRITPSYVAWDPESGERLIGDAAKNQATVNPENTVF
DIKRLIGRKFMDKTVQSDIKLLPYAVVNKNDKPQVEVEVSPGDRKQFSPE
EVSAMILQKMRSIAETYLGEDVKHAVVTVPAYFNDAQRQATKDAGTISGM
TVQRIINEPTAAAIAYGLDKKGKEQNILVFDLGGGTFDVTLLTIDNGVFE
VLATNGDTHLGGEDFDQRVMQYFIKMIKKKNNVDISSDKRAVQKLRREVE
RVKRALSTQPQARVEIEALYEGIDLSETLTRARFEELNVDLFKKTLGPVQ
KVLDDGDMAKTDIDEVVLVGGSTRIPKVQQLLKDFFGGKEPSKGVNPDEA
VAYGAAVQGGILSGDTSGFTQDLLLLDVTPLSQGIETVGGVMTKLITRNT
VIPTKKSQTFSTYQDNQPAVLIQVFEGERSMTKDNHLLGKFELTGIPPAP
RGVPQIEVTFEIDANGILQVSAEDRGTGKSEKITITAEKGRLSQDEIERM
VREAEEFADEDKKVKEKIDARNGLESYLYNLKNTLEDEEKGLADKLSASD
KKEVEATINEAMEWLEDNADADTEEYTKKQKEVETIVNPILKEVYQSAGG
PQGGADDSSYDEEL back to topmRNA from alignment at KK037248.1:206817..209730- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8259 ID=rna8259|Name=rna8259|organism=Nannochloropsis gaditana|type=mRNA|length=2914bp|location=Sequence derived from alignment at KK037248.1:206817..209730- (Nannochloropsis gaditana)
CCGGGAGGTGCCTTGCGTCGAGGGAGATCAGAGGGCGAAGGAAACTGTCT
TCGTGCGGGCGCCTGGTTGTTTTTTTTAAATTATCGACGTTGCGGTGTAC
GCGTCGCATTTGTGTTCAGCCTGTGTGTTTACCACTGCAAGTTACTTCAC
CTAGAGGTCGCTGCCTCGTCATGCCGGTCATATCAGAAGCAACCAGCATG
CGAGAGTGTATGACTATGTGGGCGTCAAAGTGGCATCGCATTCCACTATC
ACTGGGCAGATAATATGTGATGTCCCTTCATCAGTACTTGTGCATGAACC
TGTAGTCTATTCTTTCGTTTGGCCCTTCCTTCTTGTTTCGCACATCATGC
AGTTTCTATAGAATGTGTGGTCCGGAGACCCCTGAATTTGAATTTGCGGA
GGATGCACGCCCTTTATTACAGAACTTTTTATCAGGTCCTTCGCCACGAA
TTTGGTCACTGTCCACATAAGTGGAAGTTATACATACGATGCTTGATTGG
ACGAACTCATAATGTTACGTAAGTCACCAACCTCGAATCCTCAAATTGAA
CAGGTACTTTCTTCCTTCCAGAAGCACCGCCACTACAATGCAGAGAGTAC
GAAGCTGGGGTGAGTAACGCGCAGTATACTTAAAACTTTATTAGAAATTT
CAGAAAGCATACACTTAGTCTTTAGTGGATTGATACCGTCCAGCCCAAGC
TCACGTCTCCTCGTCCCTATTTCTCTCAGTCGCAGGTGCCCTCGTGACCG
TAGGCCTCATGATGGCCTCGTCCTTGGGATCTGTGAAAGCCGAGGACGAG
CCCCTGGGTACCGTGATTGGTATCGATCTGGGGACCACCTATTCTTGTGT
AGGTGTCTTCAAGAACGGCCGCGTGGAGATTATCCAAAACGATCAAGGCA
ATCGTATTACTCCTTCCTACGTGGCGTGGGACCCTGAGTCTGGCGAGCGC
CTGATTGGAGACGCTGCTAAGAACCAGGCCACGGTAAATCCGGAGAACAC
GGTCTTTGACATCAAACGTTTGATCGGCCGCAAATTCATGGACAAGACGG
TCCAGTCCGACATCAAGCTGCTGCCCTACGCCGTGGTGAACAAGAATGAC
AAGCCCCAGGTGGAGGTGGAAGTGTCGCCTGGTGATCGCAAGCAGTTTTC
GCCCGAGGAAGTGTCTGCCATGATACTTCAGAAGATGCGCTCCATCGCCG
AGACCTATCTCGGCGAAGACGTGAAGCACGCCGTGGTGACGGTCCCCGCC
TATTTCAACGACGCCCAGCGCCAGGCCACCAAGGACGCTGGAACCATTTC
GGGCATGACGGTGCAGCGCATCATCAACGAGCCTACTGCCGCCGCCATTG
CTTACGGTCTTGACAAGAAGGGCAAGGAGCAGAACATCCTCGTCTTCGAT
CTTGGTGGGGGTACCTTCGATGTGACCTTACTGACGATCGACAACGGTGT
ATTCGAGGTCTTGGCCACGAACGGTGACACGCATCTGGGTGGTGAGGACT
TCGACCAACGGGTCATGCAGTACTTCATCAAGATGATTAAGAAGAAGAAC
AACGTGGACATCTCCTCTGATAAGCGCGCCGTTCAAAAGCTTCGCCGAGA
GGTGGAACGTGTCAAGCGTGCTCTCTCCACGCAGCCCCAGGCACGTGTCG
AAATCGAGGCCCTTTACGAGGGCATCGACCTGTCGGAGACATTGACTCGC
GCCCGTTTCGAGGAACTGAACGTGGATCTCTTCAAGAAGACCTTGGGGCC
TGTGCAGAAAGTGTTGGACGACGGCGACATGGCCAAGACCGACATCGACG
AGGTGGTGCTGGTGGGCGGTTCCACGCGCATCCCCAAAGTCCAGCAGCTC
CTCAAGGACTTTTTCGGTGGAAAGGAACCTTCCAAGGGGGTCAACCCCGA
TGAGGCCGTGGCGTACGGTGCGGCTGTCCAGGGAGGCATCCTCTCGGGTG
ATACCTCTGGCTTCACCCAGGACCTGTTGCTGCTAGATGTGACCCCTCTG
TCTCAAGGAATCGAAACTGTGGGCGGAGTCATGACCAAGCTGATCACGCG
CAACACTGTCATCCCCACCAAGAAGTCCCAGACGTTCTCCACCTACCAGG
ACAACCAGCCCGCCGTCCTCATCCAAGTGTTCGAGGGCGAGCGCTCCATG
ACCAAGGACAACCACCTCCTGGGCAAGTTTGAGCTGACTGGCATCCCTCC
CGCTCCTCGCGGCGTTCCTCAGATTGAAGTGACGTTTGAAATCGATGCCA
ACGGCATCCTGCAAGTGTCGGCCGAGGACCGAGGCACAGGCAAGAGCGAG
AAGATCACCATTACGGCAGAGAAGGGTCGCCTGTCTCAGGACGAAATTGA
GCGCATGGTCCGAGAAGCCGAGGAATTCGCAGACGAGGACAAGAAGGTGA
AGGAAAAGATCGACGCGAGAAATGGTCTGGAATCTTATCTCTACAACTTG
AAAAACACTCTGGAAGATGAAGAGAAGGGACTTGCCGACAAGCTCTCTGC
CTCGGACAAAAAGGAGGTCGAAGCGACCATCAATGAGGCCATGGAATGGC
TGGAAGACAATGCGGACGCCGACACAGAGGAGTACACGAAGAAACAGAAA
GAGGTTGAGACGATCGTGAACCCCATCCTGAAGGAGGTGTACCAGTCTGC
TGGCGGGCCTCAAGGCGGCGCCGACGACAGCTCGTATGACGAGGAGCTGT
AAAGGAAGCACACTGTGACCTTAATCGTGGGCGTCTTTCACGCGTGTTGT
GTTAGTATCAAGGACTTGAGGAGGAAAACCCAAGAGACTCCATCGACCCA
TCTCGATAGACGACGAGGTTGGGCAGCGTCTGCAGTCCGTCATTTCCGGG
CCTTAGGAAGAAGTATTTTTGAAACAGATTTTTTTCAAACAACTTCGTTT
GTTTCTTGTTGAAG back to topCoding sequence (CDS) from alignment at KK037248.1:206817..209730- >rna8259 ID=rna8259|Name=rna8259|organism=Nannochloropsis gaditana|type=CDS|length=3990bp|location=Sequence derived from alignment at KK037248.1:206817..209730- (Nannochloropsis gaditana)
TCGCAGGTGCCCTCGTGACCGTAGGCCTCATGATGGCCTCGTCCTTGGGA
TCTGTGAAAGCCGAGGACGAGCCCCTGGGTACCGTGATTGGTATCGATCT
GGGGACCACCTATTCTTGTGTAGGTGTCTTCAAGAACGGCCGCGTGGAGA
TTATCCAAAACGATCAAGGCAATCGTATTACTCCTTCCTACGTGGCGTGG
GACCCTGAGTCTGGCGAGCGCCTGATTGGAGACGCTGCTAAGAACCAGGC
CACGGTAAATCCGGAGAACACGGTCTTTGACATCAAACGTTTGATCGGCC
GCAAATTCATGGACAAGACGGTCCAGTCCGACATCAAGCTGCTGCCCTAC
GCCGTGGTGAACAAGAATGACAAGCCCCAGGTGGAGGTGGAAGTGTCGCC
TGGTGATCGCAAGCAGTTTTCGCCCGAGGAAGTGTCTGCCATGATACTTC
AGAAGATGCGCTCCATCGCCGAGACCTATCTCGGCGAAGACGTGAAGCAC
GCCGTGGTGACGGTCCCCGCCTATTTCAACGACGCCCAGCGCCAGGCCAC
CAAGGACGCTGGAACCATTTCGGGCATGACGGTGCAGCGCATCATCAACG
AGCCTACTGCCGCCGCCATTGCTTACGGTCTTGACAAGAAGGGCAAGGAG
CAGAACATCCTCGTCTTCGATCTTGGTGGGGGTACCTTCGATGTGACCTT
ACTGACGATCGACAACGGTGTATTCGAGGTCTTGGCCACGAACGGTGACA
CGCATCTGGGTGGTGAGGACTTCGACCAACGGGTCATGCAGTACTTCATC
AAGATGATTAAGAAGAAGAACAACGTGGACATCTCCTCTGATAAGCGCGC
CGTTCAAAAGCTTCGCCGAGAGGTGGAACGTGTCAAGCGTGCTCTCTCCA
CGCAGCCCCAGGCACGTGTCGAAATCGAGGCCCTTTACGAGGGCATCGAC
CTGTCGGAGACATTGACTCGCGCCCGTTTCGAGGAACTGAACGTGGATCT
CTTCAAGAAGACCTTGGGGCCTGTGCAGAAAGTGTTGGACGACGGCGACA
TGGCCAAGACCGACATCGACGAGGTGGTGCTGGTGGGCGGTTCCACGCGC
ATCCCCAAAGTCCAGCAGCTCCTCAAGGACTTTTTCGGTGGAAAGGAACC
TTCCAAGGGGGTCAACCCCGATGAGGCCGTGGCGTACGGTGCGGCTGTCC
AGGGAGGCATCCTCTCGGGTGATACCTCTGGCTTCACCCAGGACCTGTTG
CTGCTAGATGTGACCCCTCTGTCTCAAGGAATCGAAACTGTGGGCGGAGT
CATGACCAAGCTGATCACGCGCAACACTGTCATCCCCACCAAGAAGTCCC
AGACGTTCTCCACCTACCAGGACAACCAGCCCGCCGTCCTCATCCAAGTG
TTCGAGGGCGAGCGCTCCATGACCAAGGACAACCACCTCCTGGGCAAGTT
TGAGCTGACTGGCATCCCTCCCGCTCCTCGCGGCGTTCCTCAGATTGAAG
TGACGTTTGAAATCGATGCCAACGGCATCCTGCAAGTGTCGGCCGAGGAC
CGAGGCACAGGCAAGAGCGAGAAGATCACCATTACGGCAGAGAAGGGTCG
CCTGTCTCAGGACGAAATTGAGCGCATGGTCCGAGAAGCCGAGGAATTCG
CAGACGAGGACAAGAAGGTGAAGGAAAAGATCGACGCGAGAAATGGTCTG
GAATCTTATCTCTACAACTTGAAAAACACTCTGGAAGATGAAGAGAAGGG
ACTTGCCGACAAGCTCTCTGCCTCGGACAAAAAGGAGGTCGAAGCGACCA
TCAATGAGGCCATGGAATGGCTGGAAGACAATGCGGACGCCGACACAGAG
GAGTACACGAAGAAACAGAAAGAGGTTGAGACGATCGTGAACCCCATCCT
GAAGGAGGTGTACCAGTCTGCTGGCGGGCCTCAAGGCGGCGCCGACGACA
GCTCGTATGACGAGGAGCTGTAAATGCAGAGAGTACGAAGCTGGGTCGCA
GGTGCCCTCGTGACCGTAGGCCTCATGATGGCCTCGTCCTTGGGATCTGT
GAAAGCCGAGGACGAGCCCCTGGGTACCGTGATTGGTATCGATCTGGGGA
CCACCTATTCTTGTGTAGGTGTCTTCAAGAACGGCCGCGTGGAGATTATC
CAAAACGATCAAGGCAATCGTATTACTCCTTCCTACGTGGCGTGGGACCC
TGAGTCTGGCGAGCGCCTGATTGGAGACGCTGCTAAGAACCAGGCCACGG
TAAATCCGGAGAACACGGTCTTTGACATCAAACGTTTGATCGGCCGCAAA
TTCATGGACAAGACGGTCCAGTCCGACATCAAGCTGCTGCCCTACGCCGT
GGTGAACAAGAATGACAAGCCCCAGGTGGAGGTGGAAGTGTCGCCTGGTG
ATCGCAAGCAGTTTTCGCCCGAGGAAGTGTCTGCCATGATACTTCAGAAG
ATGCGCTCCATCGCCGAGACCTATCTCGGCGAAGACGTGAAGCACGCCGT
GGTGACGGTCCCCGCCTATTTCAACGACGCCCAGCGCCAGGCCACCAAGG
ACGCTGGAACCATTTCGGGCATGACGGTGCAGCGCATCATCAACGAGCCT
ACTGCCGCCGCCATTGCTTACGGTCTTGACAAGAAGGGCAAGGAGCAGAA
CATCCTCGTCTTCGATCTTGGTGGGGGTACCTTCGATGTGACCTTACTGA
CGATCGACAACGGTGTATTCGAGGTCTTGGCCACGAACGGTGACACGCAT
CTGGGTGGTGAGGACTTCGACCAACGGGTCATGCAGTACTTCATCAAGAT
GATTAAGAAGAAGAACAACGTGGACATCTCCTCTGATAAGCGCGCCGTTC
AAAAGCTTCGCCGAGAGGTGGAACGTGTCAAGCGTGCTCTCTCCACGCAG
CCCCAGGCACGTGTCGAAATCGAGGCCCTTTACGAGGGCATCGACCTGTC
GGAGACATTGACTCGCGCCCGTTTCGAGGAACTGAACGTGGATCTCTTCA
AGAAGACCTTGGGGCCTGTGCAGAAAGTGTTGGACGACGGCGACATGGCC
AAGACCGACATCGACGAGGTGGTGCTGGTGGGCGGTTCCACGCGCATCCC
CAAAGTCCAGCAGCTCCTCAAGGACTTTTTCGGTGGAAAGGAACCTTCCA
AGGGGGTCAACCCCGATGAGGCCGTGGCGTACGGTGCGGCTGTCCAGGGA
GGCATCCTCTCGGGTGATACCTCTGGCTTCACCCAGGACCTGTTGCTGCT
AGATGTGACCCCTCTGTCTCAAGGAATCGAAACTGTGGGCGGAGTCATGA
CCAAGCTGATCACGCGCAACACTGTCATCCCCACCAAGAAGTCCCAGACG
TTCTCCACCTACCAGGACAACCAGCCCGCCGTCCTCATCCAAGTGTTCGA
GGGCGAGCGCTCCATGACCAAGGACAACCACCTCCTGGGCAAGTTTGAGC
TGACTGGCATCCCTCCCGCTCCTCGCGGCGTTCCTCAGATTGAAGTGACG
TTTGAAATCGATGCCAACGGCATCCTGCAAGTGTCGGCCGAGGACCGAGG
CACAGGCAAGAGCGAGAAGATCACCATTACGGCAGAGAAGGGTCGCCTGT
CTCAGGACGAAATTGAGCGCATGGTCCGAGAAGCCGAGGAATTCGCAGAC
GAGGACAAGAAGGTGAAGGAAAAGATCGACGCGAGAAATGGTCTGGAATC
TTATCTCTACAACTTGAAAAACACTCTGGAAGATGAAGAGAAGGGACTTG
CCGACAAGCTCTCTGCCTCGGACAAAAAGGAGGTCGAAGCGACCATCAAT
GAGGCCATGGAATGGCTGGAAGACAATGCGGACGCCGACACAGAGGAGTA
CACGAAGAAACAGAAAGAGGTTGAGACGATCGTGAACCCCATCCTGAAGG
AGGTGTACCAGTCTGCTGGCGGGCCTCAAGGCGGCGCCGACGACAGCTCG
TATGACGAGGAGCTGTAAATGCAGAGAGTACGAAGCTGGG back to top
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