HSP, gene7999 (gene) Nannochloropsis gaditana

Overview
NameHSP
Unique Namegene7999
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:206817..209730 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100011g70
Gene biotypeprotein_coding
GeneHSP
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:206817..209730 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0042221response to chemical
GO:0007165signal transduction
GO:0006950response to stress
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005634nucleus
GO:0005783endoplasmic reticulum
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL063ngnoL063Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO15G01500NO15G01500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8259rna8259-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8259rna8259Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8259

>rna8259-protein ID=rna8259-protein|Name=rna8259|organism=Nannochloropsis gaditana|type=polypeptide|length=664bp
MQRVRSWVAGALVTVGLMMASSLGSVKAEDEPLGTVIGIDLGTTYSCVGV
FKNGRVEIIQNDQGNRITPSYVAWDPESGERLIGDAAKNQATVNPENTVF
DIKRLIGRKFMDKTVQSDIKLLPYAVVNKNDKPQVEVEVSPGDRKQFSPE
EVSAMILQKMRSIAETYLGEDVKHAVVTVPAYFNDAQRQATKDAGTISGM
TVQRIINEPTAAAIAYGLDKKGKEQNILVFDLGGGTFDVTLLTIDNGVFE
VLATNGDTHLGGEDFDQRVMQYFIKMIKKKNNVDISSDKRAVQKLRREVE
RVKRALSTQPQARVEIEALYEGIDLSETLTRARFEELNVDLFKKTLGPVQ
KVLDDGDMAKTDIDEVVLVGGSTRIPKVQQLLKDFFGGKEPSKGVNPDEA
VAYGAAVQGGILSGDTSGFTQDLLLLDVTPLSQGIETVGGVMTKLITRNT
VIPTKKSQTFSTYQDNQPAVLIQVFEGERSMTKDNHLLGKFELTGIPPAP
RGVPQIEVTFEIDANGILQVSAEDRGTGKSEKITITAEKGRLSQDEIERM
VREAEEFADEDKKVKEKIDARNGLESYLYNLKNTLEDEEKGLADKLSASD
KKEVEATINEAMEWLEDNADADTEEYTKKQKEVETIVNPILKEVYQSAGG
PQGGADDSSYDEEL
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Synonyms
Publications