|
|
Properties
| Property Name | Value |
|---|
| Product | px domain containing protein |
| Orig transcript id | gnl|cribi|Naga_100011g63.3419.mrna |
| Orig protein id | gnl|cribi|Naga_100011g63.3419 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:191746..194683 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8253 ID=rna8253|Name=rna8253|organism=Nannochloropsis gaditana|type=mRNA|length=2825bp
ACGAAAGTTGGACATCACATGGGTAACGAGGTATTCGCTTGCCAGACAAT
TCAGCACACAGCATTGCCAGTCCTTAAGAACAGTAGATTTCTGTCTTTCC
GAATCGGGCAGCCATCGATAGATGATTCTTGAGCCTCCTGGCTCGTCTCC
AGTTAACTTACGAGAAGTCGATACCATGACTTTCATTGATATTAACGAAC
TTAATACGTCCACTTTAGGTCTGTACATCACTGGCGAAGGTTAAACATCC
ACTGGCGCGAGTGGTATGGCGGAAGCGCCTGTAAAGGAAGAAGCAAGTAC
AGGCGTAGCTCTGGACGATGCCGATGTGGAAAATGAGATTATCCAAGGAC
GTTCGGGAAAAGTGACGGGCATAATCTACCCACCGCCTGACATACGGGCA
GTAGTGGATAAAACGGCGCAATGGGTGGCTCGTAACGGTAAAAGCTTTGA
GCAACGCATTTTAAGCAGCGAGGAAGGCAAGAGCTCGAAGTTTAACTTCA
TGAAACCAGGAGACCCCTACAACGCGTACTACGAGCACAGGATCCGACAA
TTCGAAGAAGGGAAGGGAGAAGGGCCTGCTGAGAAGAAAGCGAAAATAGC
AGAAGTGTCTCCCCCAGCGGCTGGAGAGACGCGGGATGGGAAAGCGGTTG
CCGATACGGGGGAGACACCGACGGCTGTTAGCGCGGCCCCGACCACGACA
GTCAGCAAGGCCTCCGTGCTGGGCCCCATCGCCAAGGCGGCATTGCACAA
ACCAGAAGCTCCACCACCGCCACAGGAATTCTATATCTCGCATCCTGACG
GGCTGAATCCCCTCGACGTGGAGATCATCAAGCTTACCGCCCAGTACACA
GCAGCAAGCGGGCGCCAGTTCCTCGCGGCCCTGGCTCAAAGAGAGCAGCG
GAACCCCTTGTTCGAGTTCCTAAAGCCCTCGCATATTCTATTCAGCTACT
TCACCACCCTTGTAGACGCCTACATCAAGGTGCTGCAGCCCACGGACTCG
CAGCGCGCCATGGTGAGGCAGGGGCTGGAGACGCAGAAGGTGCTGGAGCG
GGCGGTCCACCGGTGGGTGCACGAGAAGGACGAGGAGCAGCGTAAGAAGC
AGCAGCAGGCGGAGCAGGAGGCGGAACGCGTGGCATACCAGTCTGTGGAC
TGGCACGACTTCGTGGTGGTGGAGACCATCACGTTCGCGGAGGACGAGCT
CCTGGACGTGGGGATGCCGGAGGTGGGGGGGGGGCGCGCGAACGGAGAGG
TGTCAGAGGACGAGGGCGAGGACATGGAGTTGGAGGAAGAAGAAGAAGCG
CTGCCCCTCCCCCCGCCCCCACGACCGCCAGTCCCGCCTCCGCGCCCGGC
GGCGGGGGAAGAAAGAGGGCCGGGGCAGGAAGGGGAGGAGGATATGGACC
TGGACGAGGGCGAGATCAAGGTGGTGTCCTCCTACAAGCCGCGCGTGGCG
GCCGGGGGCGGAGCGGCGAGACCGGAGGTGATGCTGGACCCGGTAACCGG
CAAGGAAGTCCCGATCGCGGACGTGGGCGAGCACATGCGCATCCAGTTCT
TAGACCCTCGGTGGCGAGACGAGCAGCGGCGGGCTCTGGAGAAGAGGAAG
GAGTCGGCGCTAGCAGAGGGGGGGGACATCGCGGCCAACGTGCGGAGCTT
CGCCAAGAAGAGGACGGACATCTTCGGGACCTCGGAGGAGGAGGAACGGC
AGATCCTCGCGGACCAGGAACGTTTCCGAGCCAGACAGGAGGAGAATCAG
CGCATGATCTGGCAAGGTGGCACGGGGGGGCAGGGGACGTTAGGGCCGGG
CAGGGCGCCGGGGCCGTCTCCAGTGGCCTCCTCAGAGCCACGCCCGGGCT
TCCCCCAGCAAACCAACTCCTTCGCACAGCCTCCAGCCCCGGCGCCTTCC
CAAGCTCGAGGACCCGTCCCCCCGGTATCTTCCTCTCTGCTCAAGAACAC
CTTGGCGGGCGGGGCCGGAGCAAGCAGCTTCCCTGCCCCGCCACGCGGGC
CTCCTGGGGGCCCGCCGCCAGGCCCCCCCTCGTGGTCTGCCTCAACCGCC
ACCACCACCCTTGGCACAGGCGCAGCAACAGCAACAGCAACAGCAACAGC
AACACCAAGCGCAGCAGCCACAGCAGCCGCCGCCGCCGGCAAGGCCGCCT
GTTCCCATCATACCGACCCTGGGCGCCTCGAATTTGGTCGTCGGAGAGGC
GGAGAAAGAGAAGGTCTCGGAGGAGGAGCAAAAGCCTACTTTGCTTTCCG
AGTCCGCGTATGCCTCTGCGAATACAGGGGCTGGTTCCATCAGCATACAG
GCGCCTCAGGACGAGAGCGCCGCGACCTGGAACTTGAAGGGACAGCTTGT
GAAGCTGGAGATCGGGAGTGTGATGTCTACGGTCAGGGAAGTGAAGGAGC
AGCTCTCGCCCCTCCTAGGAGGGATGCCGCCGAACAAAATGCAGTTGCGA
AATGCGGAGCAGGGGGTGTTTCTGAAGGATGCACAGACTCTTGCCTCCTA
CAATCTGGGCGCAGCGGGCTCGTCTACCGTCTTGGAGCTCGTGACTCGCT
CCAGGGGGGGCCGGAAGTAAGCTGGGAAATGGTCAGGGTCTGCTTGAGGC
AAACGCGAGCGCAAGTGCCTGGCTTGACATTGCTTCTGTGGGCGGGTCAT
ATTTGTACGAGTCCTGGGATTCCTACGCGCGTCGCGTGCATCCGATAGGT
GTAGATTTATCAACGGAGGTATTGGCGATTGGGCTGAAACTTACCTGTTC
AAATCGCAGGTTGCAAGTAGAAAGACAGGATAAGTCAATCTTCCAAAGAA
AAGGTGTTGCGAAATGAGCTTTCTA back to topprotein sequence of rna8253 >rna8253-protein ID=rna8253-protein|Name=rna8253|organism=Nannochloropsis gaditana|type=polypeptide|length=824bp
MLRTNVLQGEVHRSWVWLSPAGAKHVIDLWHDTVTGVRSVAVGMEEVPGS
MGSSPFFSAEAHHINFTVGQDQCRGMVIIEKAGLFSFRYTCVVNGRPLKA
TLQGLADEDEERFNIAILGAANAYSSKEKSVTWYELTVTRGSDGARTLVH
RRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERR
LLLETALGKLLSVPHVGAMVPVQVFLGFFDRLKEHSVIFTQRDLGLSITR
TVVPEESIVVTRVKEAGPGGQKSRVMVGDTLSKVGGEPVSKFGGFDGVAF
QVSRGLRPIVIHFLEPVDRNPSHDFLPPGEPLDIPPVHEQQRQRKAAAPH
AQSPVAPPPVVPTPSGLPTRLAATTSVALGEEASGAPTTPPVALPAQSKP
PVAALPRVEIRVPSRGPASRPRPKLGPSEDEVEHLKIERISSKREGQDPN
KLQSVLEAALVEEERRSEGQLNGSLSTSLSSAGVGEPKDPLFELETSGRG
ASEMGSTTENKVAKGQATVPTATQDNETEGEGSGAENPAAPIQASESSSG
DTLAEEGPDSDALSHDPSEPLAALALDTQELGEQENAEDGPGVTVEEPHS
PVSAPPPVAPAPPALPSYEPPPSIPAAQPASVSLIISSTSSGVPSSTSHD
PPPSTSAVSLAPASTLRSLSPPLPVIFPTSSPPTTTHPVRAVCEAEEMAA
ADVTSKISHLTDQRHATEDTLGGGASRVGKDEAIGAGPIDLTAPADVDAH
TSQTSGVHSQSHDSPPSVVAHSHDHLSPRQLHHDSRLKTPPRLEKAKLEE
EGDVAGGAETKEELVPPSPFEDYM back to topmRNA from alignment at KK037248.1:191746..194683- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8253 ID=rna8253|Name=rna8253|organism=Nannochloropsis gaditana|type=mRNA|length=2938bp|location=Sequence derived from alignment at KK037248.1:191746..194683- (Nannochloropsis gaditana)
AGCCGGGAGGAAAGATTGCCAGAACCCTACAGCTGAGAGGGTTGAGGGAG
GGCAGAGACAGCGGCGCATAGCACCTCAAGTCCGAACAAGACTGGCGAAG
TGAGGTAAGGAGCAGGATCTCTGCCGTGCAAAATGTTCGAGAAAACAACA
TTTTTGGCCGAAGGGTATGCATAAAAACACTGAGAGGGGAATGATCTTGA
ATTTTCTGGTTACGTTTTAATATCGTGGAGGGTTAATCATGTCCCTCGAG
AACCTACAGCAGATGACCAAAGATAGGCTCCCCTAAGAATATACACGCAA
TTTATTTTATGGGTTTCACGTCTTCCAAGCTCCCACAGTGATCCTCGTCA
AGTGATCAAAAGGAGGATGCTGAGAACTAATGTTCTGCAAGGCGAAGTGC
ACCGGTCTTGGGTGTGGCTGAGTCCTGCAGGTGCCAAGCACGTGATCGAC
TTATGGCATGATACAGTAACTGGCGTACGCTCCGTTGCAGTGGGCATGGA
GGAAGTGCCCGGTTCCATGGGCAGCTCACCCTTTTTCTCCGCCGAAGCGC
ACCACATAAATTTTACCGTGGGGCAAGACCAGTGTCGGGGAATGGTCATC
ATCGAGAAAGCGGGTCTGTTCTCCTTTCGATATACGTGCGTGGTCAACGG
CCGGCCGCTGAAGGCGACCCTGCAAGGGCTGGCGGATGAGGACGAAGAGC
GCTTCAACATAGCTATCCTGGGGGCAGCCAACGCCTACAGCAGCAAGGAG
AAATCGGTGACCTGGTACGAGTTGACGGTGACGCGCGGGTCGGACGGGGC
TCGCACCTTAGTGCACAGACGCTATCGAGAGTTTGTCTGCCTCTTCGAGC
AGGTTCACGCGGCTTTCAAAGGCCACCACTTGCGCTCAAGCCTGCCCGAA
CTCCCGGGCCGACAGCTGAAGCTGCTCGTCGACCACAACGACACTGCCTT
CGTGGAAGAACGCCGGCTCCTCCTTGAGACGGCGCTGGGGAAGCTGCTGA
GCGTGCCGCACGTGGGTGCCATGGTGCCAGTGCAAGTTTTTTTGGGCTTT
TTCGATCGGCTGAAGGAGCACAGCGTCATTTTCACCCAGCGGGACCTGGG
CCTGAGCATCACGCGGACGGTGGTGCCCGAGGAGTCGATCGTGGTGACGC
GCGTGAAGGAGGCGGGGCCCGGGGGGCAGAAAAGCCGGGTCATGGTGGGG
GACACGCTCTCCAAGGTGGGCGGCGAGCCCGTCTCCAAGTTCGGGGGCTT
CGATGGCGTCGCCTTTCAGGTCTCGAGGGGGCTCCGGCCCATCGTCATCC
ATTTCCTTGAACCCGTGGACAGGAACCCTTCGCACGATTTCCTTCCCCCC
GGGGAACCCCTCGACATCCCACCCGTCCACGAGCAGCAGCGCCAGCGAAA
AGCCGCGGCGCCGCACGCACAGTCTCCTGTCGCCCCCCCGCCCGTGGTCC
CCACCCCCTCGGGCCTGCCCACGCGACTGGCGGCAACCACGTCGGTGGCG
CTCGGGGAGGAAGCATCGGGCGCCCCGACAACCCCGCCCGTAGCCCTTCC
AGCCCAGTCTAAACCGCCTGTGGCGGCACTCCCACGCGTTGAGATCCGAG
TTCCTAGTCGCGGGCCTGCATCGCGCCCCCGTCCCAAGCTGGGTCCTTCC
GAGGATGAGGTGGAACACTTGAAGATCGAGCGCATATCCAGCAAGCGCGA
GGGCCAGGACCCGAACAAGTTGCAAAGCGTGCTGGAAGCTGCTTTAGTGG
AGGAGGAGAGGCGGTCGGAGGGACAATTGAACGGCTCGCTGAGCACGTCC
TTGTCCTCGGCGGGAGTGGGGGAGCCTAAAGATCCTCTTTTCGAGCTGGA
GACGAGCGGCCGGGGCGCCTCAGAAATGGGCTCTACGACAGAGAACAAAG
TGGCCAAAGGGCAAGCGACCGTGCCGACAGCGACGCAAGACAATGAAACA
GAGGGAGAAGGGAGCGGTGCTGAGAATCCCGCGGCCCCTATCCAGGCGTC
AGAGTCGAGCTCGGGAGACACACTGGCCGAGGAAGGGCCAGACTCCGATG
CATTGTCCCACGACCCTTCTGAACCTCTAGCTGCGCTTGCGCTTGACACG
CAGGAGCTTGGAGAGCAGGAAAATGCTGAGGATGGGCCTGGAGTCACCGT
GGAGGAGCCGCATTCTCCAGTATCCGCGCCGCCTCCTGTAGCTCCTGCCC
CTCCCGCTTTGCCTTCTTACGAACCTCCCCCATCCATTCCTGCCGCTCAA
CCTGCCTCTGTTTCCTTGATCATCTCTTCTACCAGCTCTGGCGTTCCCTC
TTCTACATCCCACGACCCTCCTCCATCCACTTCTGCAGTCTCCCTTGCCC
CTGCCTCCACTCTTCGTTCTCTCTCGCCGCCTCTCCCTGTCATTTTCCCA
ACCTCGAGCCCGCCGACCACTACCCATCCGGTGCGTGCAGTTTGTGAAGC
GGAGGAAATGGCGGCGGCGGACGTTACCTCCAAAATCTCCCACTTGACGG
ATCAGCGTCATGCAACGGAAGATACCCTTGGGGGCGGTGCTTCCCGGGTA
GGAAAAGATGAAGCCATAGGGGCGGGACCCATCGATTTGACAGCGCCAGC
GGATGTCGACGCCCACACGTCTCAGACGTCAGGCGTGCATTCTCAGTCTC
ACGACAGCCCCCCTTCCGTGGTGGCCCACTCACACGATCACCTGTCCCCA
CGCCAGCTCCATCACGACTCCCGGCTCAAGACGCCGCCACGGCTTGAGAA
GGCCAAACTGGAGGAAGAGGGGGATGTCGCGGGGGGAGCGGAAACTAAAG
AAGAGCTAGTGCCGCCGTCTCCTTTTGAAGACTATATGTGAAGAACAGTG
GACATATTGTGGGCGCAGGCAGAAGGGTTGTAAGTGGATATTGAAGGAGA
AAGTACAGGCGCGCAAAAACAATGAACACATAGAAAGC back to topCoding sequence (CDS) from alignment at KK037248.1:191746..194683- >rna8253 ID=rna8253|Name=rna8253|organism=Nannochloropsis gaditana|type=CDS|length=2475bp|location=Sequence derived from alignment at KK037248.1:191746..194683- (Nannochloropsis gaditana)
ATGCTGAGAACTAATGTTCTGCAAGGCGAAGTGCACCGGTCTTGGGTGTG
GCTGAGTCCTGCAGGTGCCAAGCACGTGATCGACTTATGGCATGATACAG
TAACTGGCGTACGCTCCGTTGCAGTGGGCATGGAGGAAGTGCCCGGTTCC
ATGGGCAGCTCACCCTTTTTCTCCGCCGAAGCGCACCACATAAATTTTAC
CGTGGGGCAAGACCAGTGTCGGGGAATGGTCATCATCGAGAAAGCGGGTC
TGTTCTCCTTTCGATATACGTGCGTGGTCAACGGCCGGCCGCTGAAGGCG
ACCCTGCAAGGGCTGGCGGATGAGGACGAAGAGCGCTTCAACATAGCTAT
CCTGGGGGCAGCCAACGCCTACAGCAGCAAGGAGAAATCGGTGACCTGGT
ACGAGTTGACGGTGACGCGCGGGTCGGACGGGGCTCGCACCTTAGTGCAC
AGACGCTATCGAGAGTTTGTCTGCCTCTTCGAGCAGGTTCACGCGGCTTT
CAAAGGCCACCACTTGCGCTCAAGCCTGCCCGAACTCCCGGGCCGACAGC
TGAAGCTGCTCGTCGACCACAACGACACTGCCTTCGTGGAAGAACGCCGG
CTCCTCCTTGAGACGGCGCTGGGGAAGCTGCTGAGCGTGCCGCACGTGGG
TGCCATGGTGCCAGTGCAAGTTTTTTTGGGCTTTTTCGATCGGCTGAAGG
AGCACAGCGTCATTTTCACCCAGCGGGACCTGGGCCTGAGCATCACGCGG
ACGGTGGTGCCCGAGGAGTCGATCGTGGTGACGCGCGTGAAGGAGGCGGG
GCCCGGGGGGCAGAAAAGCCGGGTCATGGTGGGGGACACGCTCTCCAAGG
TGGGCGGCGAGCCCGTCTCCAAGTTCGGGGGCTTCGATGGCGTCGCCTTT
CAGGTCTCGAGGGGGCTCCGGCCCATCGTCATCCATTTCCTTGAACCCGT
GGACAGGAACCCTTCGCACGATTTCCTTCCCCCCGGGGAACCCCTCGACA
TCCCACCCGTCCACGAGCAGCAGCGCCAGCGAAAAGCCGCGGCGCCGCAC
GCACAGTCTCCTGTCGCCCCCCCGCCCGTGGTCCCCACCCCCTCGGGCCT
GCCCACGCGACTGGCGGCAACCACGTCGGTGGCGCTCGGGGAGGAAGCAT
CGGGCGCCCCGACAACCCCGCCCGTAGCCCTTCCAGCCCAGTCTAAACCG
CCTGTGGCGGCACTCCCACGCGTTGAGATCCGAGTTCCTAGTCGCGGGCC
TGCATCGCGCCCCCGTCCCAAGCTGGGTCCTTCCGAGGATGAGGTGGAAC
ACTTGAAGATCGAGCGCATATCCAGCAAGCGCGAGGGCCAGGACCCGAAC
AAGTTGCAAAGCGTGCTGGAAGCTGCTTTAGTGGAGGAGGAGAGGCGGTC
GGAGGGACAATTGAACGGCTCGCTGAGCACGTCCTTGTCCTCGGCGGGAG
TGGGGGAGCCTAAAGATCCTCTTTTCGAGCTGGAGACGAGCGGCCGGGGC
GCCTCAGAAATGGGCTCTACGACAGAGAACAAAGTGGCCAAAGGGCAAGC
GACCGTGCCGACAGCGACGCAAGACAATGAAACAGAGGGAGAAGGGAGCG
GTGCTGAGAATCCCGCGGCCCCTATCCAGGCGTCAGAGTCGAGCTCGGGA
GACACACTGGCCGAGGAAGGGCCAGACTCCGATGCATTGTCCCACGACCC
TTCTGAACCTCTAGCTGCGCTTGCGCTTGACACGCAGGAGCTTGGAGAGC
AGGAAAATGCTGAGGATGGGCCTGGAGTCACCGTGGAGGAGCCGCATTCT
CCAGTATCCGCGCCGCCTCCTGTAGCTCCTGCCCCTCCCGCTTTGCCTTC
TTACGAACCTCCCCCATCCATTCCTGCCGCTCAACCTGCCTCTGTTTCCT
TGATCATCTCTTCTACCAGCTCTGGCGTTCCCTCTTCTACATCCCACGAC
CCTCCTCCATCCACTTCTGCAGTCTCCCTTGCCCCTGCCTCCACTCTTCG
TTCTCTCTCGCCGCCTCTCCCTGTCATTTTCCCAACCTCGAGCCCGCCGA
CCACTACCCATCCGGTGCGTGCAGTTTGTGAAGCGGAGGAAATGGCGGCG
GCGGACGTTACCTCCAAAATCTCCCACTTGACGGATCAGCGTCATGCAAC
GGAAGATACCCTTGGGGGCGGTGCTTCCCGGGTAGGAAAAGATGAAGCCA
TAGGGGCGGGACCCATCGATTTGACAGCGCCAGCGGATGTCGACGCCCAC
ACGTCTCAGACGTCAGGCGTGCATTCTCAGTCTCACGACAGCCCCCCTTC
CGTGGTGGCCCACTCACACGATCACCTGTCCCCACGCCAGCTCCATCACG
ACTCCCGGCTCAAGACGCCGCCACGGCTTGAGAAGGCCAAACTGGAGGAA
GAGGGGGATGTCGCGGGGGGAGCGGAAACTAAAGAAGAGCTAGTGCCGCC
GTCTCCTTTTGAAGACTATATGTGA back to top
|