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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100011g58.3449.mrna |
| Orig protein id | gnl|cribi|Naga_100011g58.3449 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:178705..179710 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8248 ID=rna8248|Name=rna8248|organism=Nannochloropsis gaditana|type=mRNA|length=4082bp
GAGTCACTTTACAATGCCCTAATTCACAACATACAAAGGATCGTCGTCCA
TCTCACGGGTGAAGCACATGGACGATCGGGAAAAGGGTTCGGTTGTGGCA
AAGATGTTCTGCTGATACTTTCATGGCTGCGTCTCGACTCTGACAGGAGC
CGCAGAAACCAAAGTTAAGCAGGTCAGGGCGCATTGGTCAACACGCCGAC
TATTGATGGCTCGAAGGCAGCAGGAGGGCAAGAGGGGCTCCCGGCGTGGA
GGGGGGAGAGGCTCGACGCCTGGGTCTCGCTCCGGCCATAGAGATGACAG
CGGCGGTTTGAATACTGACAGCCCGCGTGCCCGATCTGTTACGGTGCGGG
CCAAGAAATTGCTCCTCCACGATGATTGTAAAAAGCATATATTGGATTTG
ATACATCAGCTGCGCGAGCAAGAAAGAGACGACGACATCAGCCCTGATGG
ATGTACCGAGACACGCATCAAGGCCCCCCGCCGCGATCGAAGCAGCGGCA
TGCCGCGAGGTTCACAAACCGAGCTGATGCTCAAAGGAGGATGTGATTCT
TCCCTTGAAGCCCTAGAGCAGGCTTTGATGGAGGCGGGAGTTGGGGATGG
AGACGCGCCATCAAGCGAAGAGGAGGACTTGGGCGAGAGCCGCGTGTTCG
CAGCCATGGCCAACATGATGGCGAGGACCAAGTTGAGTGCGGTGGCAGAC
GATGATAGTTCAGAGGAAGGCTCTGAGAGCCACAGTGAGGACAGTCTCGA
CGAAGATGAAGAGAGCAGTGGTAGCGAGGACGAAGGAAGGGCCATTCAAA
CATCCCTCTCCAGGCAAGAGCAGGAAGTGCTTCTGAAGCGCCTCATAAAA
TCAGCAAGGGAGGAATATGTCGCCAATGAAGTAGAAGCCGCAACGAATGC
CGAGCATGATTGTGCACTCAAAAGCCGGAATAGGACGTTGTCCAAAAAGG
TGCGACTGACCCTCTGCAACGAGAATGGGGGGCGCAAGGTGGTGGTGCTG
GAGCGGCGGAAGGACTTGAAGGGACTTTTCGACGCGGCAAAAAACAAGCT
GAAAATTAAGAAGCCTATGCATGCCATTCTACAGTCGGGCGAGAACTTGG
GAAACACGCTCTTGGTGGGTGATGGGGCTGTAGTCGTAGTCAAAGGGAAG
GAAGGCAAAGGCTTGCCTCCCAGGGCCCTCCCCCCGGTGCCTGCGCAGAA
AATGGACGAGCAGAAGAGGCTGGAAGCACGGGAAAGTGCGGAGAGGAAAG
AGATAGAGAAAGTGAAGGAGACAATGGCGTCACTGGCGGCGGTGAAAAAG
GCGTACTTGAAACGAAACGAGCTGGACCTGAAGAGCGAGGAAGGACGGGG
CAAGTTGACAGAGAGCCGAGAGAGGGCTTTCGAGAGCTTGCGACTAGCGG
AGTTATTACAGAAGAAGGAGGGGTCATCCAAGTATAAGGGCTCTTTCTTC
GAACAACGCGCTAGCCTGCCTGCCTTCTCGCAACGAGAAGCCATCCTGGA
GGCAGTGGCGGCGCACCAAGTGGTGGTGGTGGAGGGAGAGACCGGCTCGG
GGAAGACGACGCAGTTGCCCCAGTTTATTCTTGACGACTGGTCAGCGCGC
GGGAAGGGTGGAGAATGCAACATTGTGTGCACGCAACCGCGCCGCATCAG
CGCCATCGGTGTGGCGGAGCGCGTGGCAGAAGAGAGGCTAGAGAAGGTGG
GCGAGACGGTCGGCTACAGTGTCCGGTTCAACACCCGGCGCAGCCCCCAG
ACACGCCTTCTTTTCTGCACCACCGGAGTCCTCCTGCGGCGCTTGGCTTA
CGATAAGGATCTGGCCGGTGTGTCGCATGTTTTGGTGGACGAGGTGCACG
AGCGGACCCTGGAGTCGGACTTCCTGCTCATCGTCCTCAAAGACCTTCTG
GCTTGCCGGCCCGAATTGAAGGTCGTTTTGATGAGCGCAACCCTGCAGGC
TTCTCTTTTTTCGAGCTACTTTGACAACAGCCCTTGCCTGCACATTCCCG
GGCGCGCTTTCCAAGTCTCACAACTCTACTTGGACGACGTGGAGGAGCTT
GTGGCAGGGCGGAGAGGGCCTGGGAGACCAAGGGCGGCACCACGTGCGTC
GAGAGCGGGCTCACACTTTGCAAGGGGGCGTACCGATCGCGGGGGTATGG
CACGGAAAAGTTCAGAACCGTGCGATGGTGAGCCTCTTTCTCACTCTCAC
ACGGCTCGCAACAGCACTGGAAAAGGAGAGGAGACTGAGGACGGTCAGGA
CGGGGACGAGACTTTGAAAGAGGATTTTGGGGCCGAGGGGGCGCGACAGC
TCCGAATGTCTTTTTCCACCCCCTCGGATCGTGTGGCCATTGACTACGAG
CTGATTGCTAAATTGACGCGTCGATTAGTCGAAGATTTCGGGGACAAAAA
TGAAGAAGACGGCGGGGGTGCTGTTCTAATTTTTTTACCGGGCTTGTCAG
AGATTGAACGGAGTATTCGGACAATGAAGCAAGACGCCCTGCTGTCTGAT
AAGAAGCGGGCCTGCATCTTCGCTTTGCACTCCTCAATGCCAACGGAAGC
TCAGCGGGCTATTTTTAGGAAGATGGAAGCTGGCGTCTGTAAGATAGTCG
TGGCGACCAACATCGCTGAGACCTCTATCACGGTTACAGATGTGACGCAC
GTGATTGACACCGGCAGAGAGAAGCAGACAGGCTACGATCCATACACGCA
TATGACATCCCTCCGGGAGGTCTGGACGTCGCAAGCCTCTGCAAAACAAC
GGGCTGGTCGGGCTGGCCGTGTCCGACCTGGGATATGCTATCGGCTCTAT
ACGGAATCATTTATGCAAGATAATATGGCCCCGCACGCGCCACCCGAGAT
TCGGCGTGTCCTGTTGGAAAATCTGATTCTTACAATCCTTCTGCTGGAAT
TAGGGCCCCCCGAAGCCTTCTTGCAGCGAGCTGTCGAGCCTCCTTCGCCA
AAAGCCGTAAAAGCATCTCTCCAAGTCTTACTCGACATTGAGGCAGTCGC
TTTAGGCCCCCCGCTTCCAAACGGCTCGCGGGCAATCGTTCTCAATCCTT
TGGGCTTCCATCTTGCCTCACTTCCTGTAGATTGTCGCCTAGGCAAGATG
CTCGTCTTTGCTTCGCTTTTTGCGTGCGTGGATCCCATCCTCACTATTGC
CGCCGCTTTCTCGAGTAGAAGTCCGTTCGTTGCACCCATCGGCAAGCGAG
AGGAGGCACAACTCGCTAAGCAGCGTTTTGCCGAGGATAAGAGCGATCAT
CTTGCTCTCGTTGCGCTGTGGAAGGCGTGGAAAAGAGTCAAGGACGGTGA
CACGACCGCCAGGAAAGCTTTTGCCAAGGCCAATTTCGTCTCCATCGCTG
CGCTGGAGGAGATTGATGCTACACGGTCCAAGCTTTATGATGATCTGGTT
AAATGTGGGTTTGCGCCATGTGCTACTGCTGAAAGCCAATCAGCGACAAA
ATCTTTACAAGCAATCGACTACGATTCAAACGAGAACGACAAGCGTTTGT
TACGATGCATTTTGCTCTGCGGCCTTACGCCACAGATAGCCAAGCTGGTT
CGACCCACCCGTGGGAGAGGAGCCCATTTCATAACAAAGGACCCTACCTT
AGACGTCGCAATACATCCTTCATCTGTGAATGCTAAACGCATTTCCCAGG
CAGGCTCTGACGGCAACGAGGCGTTGGCTGTCTATCACCGTAAGATGCGC
ACGAGCCGCACGTATCTCCATGACATTTCTTTCGTCTCTCCGTTGAGCGT
CCTCCTCTTCGGTTCAAATATACGCACACGCCGGGAGCATGGTGGAATTG
CGAGTAAAGTTGTAAACATAACGGTTGATGACTGGCTTTCTTTCAAAACC
AAGGAGGAGACAAGCGTGCTTGTGACTGTCTTTAAAAAACATTTAGACGC
TTGTCTCACGCAAAAAATAACACAACCTGACTCTAACTTTATTTCACGCT
TTCAGCCAGTCGTCCGTACTTTGCGAAGGGTCCTCTGGCTCGAGGCGGTG
TAAGAGTAGGGGACGGTCTTAACACTTTCCATATACATATTTGAAAAGCA
AAAAGAAATTACAGGCAGTTGTAAGACCATTT back to topprotein sequence of rna8248 >rna8248-protein ID=rna8248-protein|Name=rna8248|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp
MSLSQSSAPLPRFRAVSDSASTAALRRDLTPRTPRVSFMQVATYIWLFLS
LSVAVLGYAACMSSATHSFLHCTPTACTFERYQGKFKSPVEQISFSRDRL
VGAETTRTRNGEVVSFEGARRRRQRVLGHSYLIKYLRKRDEEVRQDLGST
ESSILFTKHNTGRKRARRQTLEINKYARGELNWLEVMETKRWNAFGVLSL
VVGLVSAAFAMLVGDLFGNQGDENKLK back to topmRNA from alignment at KK037248.1:178705..179710+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8248 ID=rna8248|Name=rna8248|organism=Nannochloropsis gaditana|type=mRNA|length=1006bp|location=Sequence derived from alignment at KK037248.1:178705..179710+ (Nannochloropsis gaditana)
ATGTCCCTTTCCCAAAgctctgccccccttccccggtTTCGCGCTGTCTC
CGACTCAGCGTCCACCGCGGCATTGCGTCGCGATCTCACACCCAGGACTC
CGCGGGTCTCCTTTATGCAAGTGGCTACATACATATGGCTTTTCCTTTCA
CTTAGTGTAGCTGTACTCGGTTACGCAGCATGCATGTACGTAAAGCGATT
GGTGGGTCTTCCTATGAGTGTCAGTTGGTGTTAGAGCTCTGggttccttt
ccttttttattcATATCCTTCTCTTCAGGTCCTCTGCCACACATTCTTTT
CTGCACTGTACGCCAACGGCATGTACATTTGAGCGTTATCAGGGCAAATT
TAAGTCGCCAGTCGAGCagatttctttttcccgGGATCGCCTCGTCGGTG
CTGAAACGACTCGGACTCGAAATGGCGAAGTCGTCAGTTTTGAGTAAGTG
CGCCATCGTACGATTTGCAAAACAAAAGTAAAGCGTGGCAGATATAGCAA
AGTATTGTGAGGTATCGCTACAATTTGTGCTTATTCTTTCATTAAAAATA
TTTTAAAACATATCTGATTAGGGGGGCGCGGCGACGAAGGCAACGGGTAT
TGGGACACAGTTACCTCATCAAATACCTTAGAAAACGTGATGAGGAAGTC
CGGCAAGATCTTGGATCGACCGAGTCAAGCATTCTTTTTACAAAGCACAa
cacggggaggaagcgagcacGGTATGTGAAAAACGGGTGGCAGCGGACCG
AGTGGCAACCTAAATCCGTTACTGCATGGGTGAAGGGCGAGGTTTTATAC
TCATAGTGAATCCATTTCACAGGCGACAAACTTTAGAAATAAACAAATAC
GCAAGAGGCGAATTGAACTGGCTCGAGGTGATGGAGACGAAAAGATGGAA
TGCTTTCGGTGTTCTATCCCTTGTGGTCGGGTTGGTCTCAGCTGCTTTTG
CGATGCTAGTTGGCGACCTTTTCGGCAACCAAGGCGATGAAAACAAGCTT
AAATAA back to topCoding sequence (CDS) from alignment at KK037248.1:178705..179710+ >rna8248 ID=rna8248|Name=rna8248|organism=Nannochloropsis gaditana|type=CDS|length=2736bp|location=Sequence derived from alignment at KK037248.1:178705..179710+ (Nannochloropsis gaditana)
ATGTCCCTTTCCCAAAgctctgccccccttccccggtTTCGCGCTGTCTC
CGACTCAGCGTCCACCGCGGCATTGCGTCGCGATCTCACACCCAGGACTC
CGCGGGTCTCCTTTATGCAAGTGGCTACATACATATGGCTTTTCCTTTCA
CTTAGTGTAGCTGTACTCGGTTACGCAGCATGCATGTCCTCTGCCACACA
TTCTTTTCTGCACTGTACGCCAACGGCATGTACATTTGAGCGTTATCAGG
GCAAATTTAAGTCGCCAGTCGAGCagatttctttttcccgGGATCGCCTC
GTCGGTGCTGAAACGACTCGGACTCGAAATGGCGAAGTCGTCAGTTTTGA
GGGGGCGCGGCGACGAAGGCAACGGGTATTGGGACACAGTTACCTCATCA
AATACCTTAGAAAACGTGATGAGGAAGTCCGGCAAGATCTTGGATCGACC
GAGTCAAGCATTCTTTTTACAAAGCACAacacggggaggaagcgagcacG
GCGACAAACTTTAGAAATAAACAAATACGCAAGAGGCGAATTGAACTGGC
TCGAGGTGATGGAGACGAAAAGATGGAATGCTTTCGGTGTTCTATCCCTT
GTGGTCGGGTTGGTCTCAGCTGCTTTTGCGATGCTAGTTGGCGACCTTTT
CGGCAACCAAGGCGATGAAAACAAGCTTAAATAAATGTCCCTTTCCCAAA
gctctgccccccttccccggtTTCGCGCTGTCTCCGACTCAGCGTCCACC
GCGGCATTGCGTCGCGATCTCACACCCAGGACTCCGCGGGTCTCCTTTAT
GCAAGTGGCTACATACATATGGCTTTTCCTTTCACTTAGTGTAGCTGTAC
TCGGTTACGCAGCATGCATGTCCTCTGCCACACATTCTTTTCTGCACTGT
ACGCCAACGGCATGTACATTTGAGCGTTATCAGGGCAAATTTAAGTCGCC
AGTCGAGCagatttctttttcccgGGATCGCCTCGTCGGTGCTGAAACGA
CTCGGACTCGAAATGGCGAAGTCGTCAGTTTTGAGGGGGCGCGGCGACGA
AGGCAACGGGTATTGGGACACAGTTACCTCATCAAATACCTTAGAAAACG
TGATGAGGAAGTCCGGCAAGATCTTGGATCGACCGAGTCAAGCATTCTTT
TTACAAAGCACAacacggggaggaagcgagcacGGCGACAAACTTTAGAA
ATAAACAAATACGCAAGAGGCGAATTGAACTGGCTCGAGGTGATGGAGAC
GAAAAGATGGAATGCTTTCGGTGTTCTATCCCTTGTGGTCGGGTTGGTCT
CAGCTGCTTTTGCGATGCTAGTTGGCGACCTTTTCGGCAACCAAGGCGAT
GAAAACAAGCTTAAATAAATGTCCCTTTCCCAAAgctctgccccccttcc
ccggtTTCGCGCTGTCTCCGACTCAGCGTCCACCGCGGCATTGCGTCGCG
ATCTCACACCCAGGACTCCGCGGGTCTCCTTTATGCAAGTGGCTACATAC
ATATGGCTTTTCCTTTCACTTAGTGTAGCTGTACTCGGTTACGCAGCATG
CATGTCCTCTGCCACACATTCTTTTCTGCACTGTACGCCAACGGCATGTA
CATTTGAGCGTTATCAGGGCAAATTTAAGTCGCCAGTCGAGCagatttct
ttttcccgGGATCGCCTCGTCGGTGCTGAAACGACTCGGACTCGAAATGG
CGAAGTCGTCAGTTTTGAGGGGGCGCGGCGACGAAGGCAACGGGTATTGG
GACACAGTTACCTCATCAAATACCTTAGAAAACGTGATGAGGAAGTCCGG
CAAGATCTTGGATCGACCGAGTCAAGCATTCTTTTTACAAAGCACAacac
ggggaggaagcgagcacGGCGACAAACTTTAGAAATAAACAAATACGCAA
GAGGCGAATTGAACTGGCTCGAGGTGATGGAGACGAAAAGATGGAATGCT
TTCGGTGTTCTATCCCTTGTGGTCGGGTTGGTCTCAGCTGCTTTTGCGAT
GCTAGTTGGCGACCTTTTCGGCAACCAAGGCGATGAAAACAAGCTTAAAT
AAATGTCCCTTTCCCAAAgctctgccccccttccccggtTTCGCGCTGTC
TCCGACTCAGCGTCCACCGCGGCATTGCGTCGCGATCTCACACCCAGGAC
TCCGCGGGTCTCCTTTATGCAAGTGGCTACATACATATGGCTTTTCCTTT
CACTTAGTGTAGCTGTACTCGGTTACGCAGCATGCATGTCCTCTGCCACA
CATTCTTTTCTGCACTGTACGCCAACGGCATGTACATTTGAGCGTTATCA
GGGCAAATTTAAGTCGCCAGTCGAGCagatttctttttcccgGGATCGCC
TCGTCGGTGCTGAAACGACTCGGACTCGAAATGGCGAAGTCGTCAGTTTT
GAGGGGGCGCGGCGACGAAGGCAACGGGTATTGGGACACAGTTACCTCAT
CAAATACCTTAGAAAACGTGATGAGGAAGTCCGGCAAGATCTTGGATCGA
CCGAGTCAAGCATTCTTTTTACAAAGCACAacacggggaggaagcgagca
cGGCGACAAACTTTAGAAATAAACAAATACGCAAGAGGCGAATTGAACTG
GCTCGAGGTGATGGAGACGAAAAGATGGAATGCTTTCGGTGTTCTATCCC
TTGTGGTCGGGTTGGTCTCAGCTGCTTTTGCGATGCTAGTTGGCGACCTT
TTCGGCAACCAAGGCGATGAAAACAAGCTTAAATAA back to top
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