EWM22449.1, cds8224 (CDS) Nannochloropsis gaditana

Overview
NameEWM22449.1
Unique Namecds8224
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:178705..178889 +
Alignment locationKK037248.1:178983..179147 +
Alignment locationKK037248.1:179276..179425 +
Alignment locationKK037248.1:179527..179710 +

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Properties
Property NameValue
Protein idEWM22449.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g58.3449.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:178705..178889 +
KK037248.1supercontigKK037248.1:178983..179147 +
KK037248.1supercontigKK037248.1:179276..179425 +
KK037248.1supercontigKK037248.1:179527..179710 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM22449.1 vs. NCBI_GenBank
Match: gi|585102955|gb|EWM22449.1| (hypothetical protein Naga_100011g58 [Nannochloropsis gaditana])

HSP 1 Score: 468.003 bits (1203), Expect = 5.931e-167
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 
Query:    1 MSLSQSSAPLPRFRAVSDSASTAALRRDLTPRTPRVSFMQVATYIWLFLSLSVAVLGYAACMSSATHSFLHCTPTACTFERYQGKFKSPVEQISFSRDRLVGAETTRTRNGEVVSFEGARRRRQRVLGHSYLIKYLRKRDEEVRQDLGSTESSILFTKHNTGRKRARRQTLEINKYARGELNWLEVMETKRWNAFGVLSLVVGLVSAAFAMLVGDLFGNQGDENKLK 227
            MSLSQSSAPLPRFRAVSDSASTAALRRDLTPRTPRVSFMQVATYIWLFLSLSVAVLGYAACMSSATHSFLHCTPTACTFERYQGKFKSPVEQISFSRDRLVGAETTRTRNGEVVSFEGARRRRQRVLGHSYLIKYLRKRDEEVRQDLGSTESSILFTKHNTGRKRARRQTLEINKYARGELNWLEVMETKRWNAFGVLSLVVGLVSAAFAMLVGDLFGNQGDENKLK
Sbjct:    1 MSLSQSSAPLPRFRAVSDSASTAALRRDLTPRTPRVSFMQVATYIWLFLSLSVAVLGYAACMSSATHSFLHCTPTACTFERYQGKFKSPVEQISFSRDRLVGAETTRTRNGEVVSFEGARRRRQRVLGHSYLIKYLRKRDEEVRQDLGSTESSILFTKHNTGRKRARRQTLEINKYARGELNWLEVMETKRWNAFGVLSLVVGLVSAAFAMLVGDLFGNQGDENKLK 227
The following BLAST results are available for this feature:
BLAST of EWM22449.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102955|gb|EWM22449.1|5.931e-167100.00hypothetical protein Naga_100011g58 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8248rna8248Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications