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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100011g43.3427.mrna |
| Orig protein id | gnl|cribi|Naga_100011g43.3427 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:138395..139394 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8231 ID=rna8231|Name=rna8231|organism=Nannochloropsis gaditana|type=mRNA|length=2327bp
CCTGAGCATCCAAAAACGTCACCACTAAGGCATAGTTTAATTACTGTTCC
TGCACCCTTTCATCTCGTGAGCTCGCACGGATTGGCGATAGGGGCGCGAC
GTGCAGGTACTGCTAGTAGCAGCGACCGAGGATGATCATACAGCGGCCTG
GTATGAACCCGAAGTCCCTATATTTGCGGACGAGATGATGGCTTAATGCG
GCAAAGTAATGTACTTGAAGGAACTGGAACGTTCTTCGCTTGACAGCTTC
ACATCCACCTGCACAGGGCGGTGTGACGGTGTGGGAGGTTGGAAGGGGTA
TTGCGTGAGCTTGCGTCTTCACACGCCCTGCCGAGCCTAAAACTTGCGCT
CCTGTATGACAGTCGGGACGGCTCAGCAAAATAGTCGGATGGCACTTGTG
CTGGCTTTGGTCCTTGAAGAGACTATCTGGTGAAGAATATGGAAAGAGCT
TTGCATAGTCAAGACGTCGTAAAAGCCGTGCTTTCCTACCTGGACCATTA
TACTCTCCTACGAAGAGGTGCCAGAGTTAGCCGTGGATGGCAACGTGTTA
TTGAGGCAGGTGGTCTAGGCGAAGAGGCGTGTCGATTAGCCTTCTGGTCA
CACTATCGCAGCCAAGATGAGTGCTACCCGAATGATTTTGCCACAATCTC
TACTTCGTCATTTTCTTGGCGGAAAGAATGCAAAAGCAGGAGGTTGAACG
GCTGGAGTCCTCGTGAAGATATCGTTGGGCCGAGCACAGTGTGTGATATC
ACTGGAGACGTGATCTTTGCAGTCGCCGCGACTCCAGTGGACAGCTTGTT
CATTTGTGGTGGGGAAAACGGCATCCTTTATTTTATCGATATCACCGAGG
AGGTCGGCAAAGCCATTCGCTACCACTTTGAGGCGCATACAGGCACACTT
TTGGCCCTTTCCGCACGAAAGTCCTGTCCAGGCCGTGATGGCGTGTCCAT
GTACCACGTCATAAGTGGCGACACCCTGGGCTGTATCCAGATTAACGCTG
TTGACGTTGTACATCGGACCAGACACATTCTTTATACCCTGCGTCTGAAA
ACCTCGGTCCTTCACTTCGTGCGACTCCGAAGGGACATGCAGGCTAGCGC
TTTGCGGGACGGCACCGTATTCTGTTGGAGGGACTACTCCGGGTCACAAG
AGAAGTCAGGCGAAGGTCATGGCAGCGGTGAAGCTAACGCAACTCACGCT
CACAATGGAGAAGTGACGCATTTTACTGGAATCGGTGAGGAAAATAGGGT
CAGATTGCTTGTAACGGCCTCGAATTCCGACCAAAATCTGCGGACCTGGC
GTACGGCGTTCGGGAAAGATCCGGGGAACTCGGTGAGAGTTGAGCTGGAG
CCCATGCAGGTACTGTCGTTGGCAAGCTTAAGCGTGGGATCTCTTTGCAC
TAGCTCGGGGATGAGCGTCGCGCCTGACGGGGTTGTAACCCTGGGTTTTG
GGAACGGCCGAGTCTGCTCTCTGGATGCTTATACGTGCTCGCTGATCAGC
GTCCTGCACGTACACGACGACGAAGTATGGGACGTGCGAAGCTGTGGGAG
CGGCATGGTTGTTACATCATCCCGAGACCGAAGCGTAGCTGTAAGTGACA
TCCGCTCTGCAGACCCGTCGGATCATTTCCGGTTGGCTGTAGGCAACTGG
ATCGTACGTGTGAAGGCGACACCCGCATGTCTTCTCTTGTTGGGCTTTGA
CGCACAGCTTCGTGTCGTCAGAAAAAGGTCCTTGAAAATGTGAAAGCATG
TGTGAAGAGTTTCGCGGTACCTACTCGAATTCCCCCTTCACTGATAAGTC
CCGGAGCCAACATGAATAGGGTCCCCCCCTGACACAGGATGTTATCGACT
TTGTGTTTTCATCCGAACCAGAGTCATTATGACGATCATGGTAAGGGAAC
GTGATGAGCGCAATTCACAATGATATTTTGTCAAATTATGGTGCGGGCCG
ACTGATAGGTGAATTGGTAACTTTAGGACTCATTATCAGGGTTAGGTACC
CCCTTTCGCAATCAGTAGGTGCTCGCCTGACGTGAATCTCGCTATCGCCA
GAATTCCGAGGTACTTTTACTGACTACGTGATATGTAAGCAAGCGAAAAG
AAAATTCACACAAGCCCCAAGACGGGTGTCGAGGAATATATATCAAAATG
TGCCAATATGCTTCCACGCTTCATGCACGGAATGACTGGCCACACGCGCG
CGTGGATGCACATGCCGCGTCATTCATTGAAAACAGTGCAGGGGGAAAGT
TCCTTTTTTTTCGACACGGATTCACCAATGTTTGGGATATAGATATTCCC
CTGTTGTCGTACAAAAGAAGGCTCACC back to topprotein sequence of rna8231 >rna8231-protein ID=rna8231-protein|Name=rna8231|organism=Nannochloropsis gaditana|type=polypeptide|length=113bp
MTPEVLLPPEEPRFVAAEDTSIRVEWDAVDTLRYRIQYKEYLQSWEEAAQ
VDVPSGQNRMVAALPDLQPCATYCVRLVAVDEDGLESPPGPEIFVDTQAA
NCTPKHKKACCIC back to topmRNA from alignment at KK037248.1:138395..139394+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8231 ID=rna8231|Name=rna8231|organism=Nannochloropsis gaditana|type=mRNA|length=1000bp|location=Sequence derived from alignment at KK037248.1:138395..139394+ (Nannochloropsis gaditana)
AGCAGTACCTGCACGTCGCGCCCCTATCGCCAATCCGTGCGAGCTCACGA
GATGAAAGGGTGCAGGAACAGTAATTAAACTATGCCTTAGTGGTGACGTT
TTTGGATGCTCAGGCACGCAATTGGACGATTTTTCATGTAACATTCGCGA
ATCCCTGGAAGTCTCCGATAGCGCTCTTCCTTGAAAATGATATAAATATG
GCGCCATCATCACACAGGAAAGTGTCCTACCGAATCGCACGAACTCTTTT
TTCTCAAAAAATGTATTTTTCAATCACATCTCAATTTAATCTCTCCATTT
TTAAAAGTACACATGACTCCTGAAGTCTTATTGCCACCCGAGGAGCCCCG
CTTTGTAGCCGCGGAGGATACGTCGATAAGAGTGGAGTGGTAAGTGCTCT
TCTTTGTGTGCTGGTACGCGCCGGGTGTCATTGTTGTGAAGTCTACGCCT
ATTATGTCGACTCTTTTTGCTGAAACAATTCTTCACAATTTGAAAGCGTG
CGGCAGCACACCTGTTTGTCGCTATCATCACATAttcatccccttccacc
gctttTCGCGCAGGGACGCTGTAGACACATTACGATACCGCATTCAGTAT
AAAGAATACCTTCAAagttgggaggaggcggcgcaggTAGACGTTCCAAG
CGGACAAAATAGAATGGTCGCGGCGCTTCCTGACTTGCAGCCATGCGCGA
CGTACTGTGTCCGGCTGGTGGCAGTTGACGAGGACGGGTTAGAGAGTCCG
CCAGGCCCGGAGATCTTCGTCGATACGCAAGGCAAGGATGGTGGAAGGAc
acaggtgggagggaaatgattTTCGGTTTGCACGTCCTATCGTCACTCAA
TTCTATTTTTACACAAAGTAAACATCTCACAGCCATCACTGTCCGATTCT
CTCGACAGCCGCCAACTGCACGCCCAAGCACAAAAAAGCATGTTGTATAT
GTTAACACAATAAAagcaagagaagaagaattGCGACGTCGTGACGAATT
back to topCoding sequence (CDS) from alignment at KK037248.1:138395..139394+ >rna8231 ID=rna8231|Name=rna8231|organism=Nannochloropsis gaditana|type=CDS|length=1026bp|location=Sequence derived from alignment at KK037248.1:138395..139394+ (Nannochloropsis gaditana)
ATGACTCCTGAAGTCTTATTGCCACCCGAGGAGCCCCGCTTTGTAGCCGC
GGAGGATACGTCGATAAGAGTGGAGTGGGACGCTGTAGACACATTACGAT
ACCGCATTCAGTATAAAGAATACCTTCAAagttgggaggaggcggcgcag
gTAGACGTTCCAAGCGGACAAAATAGAATGGTCGCGGCGCTTCCTGACTT
GCAGCCATGCGCGACGTACTGTGTCCGGCTGGTGGCAGTTGACGAGGACG
GGTTAGAGAGTCCGCCAGGCCCGGAGATCTTCGTCGATACGCAAGCCGCC
AACTGCACGCCCAAGCACAAAAAAGCATGTTGTATATGTTAAATGACTCC
TGAAGTCTTATTGCCACCCGAGGAGCCCCGCTTTGTAGCCGCGGAGGATA
CGTCGATAAGAGTGGAGTGGGACGCTGTAGACACATTACGATACCGCATT
CAGTATAAAGAATACCTTCAAagttgggaggaggcggcgcaggTAGACGT
TCCAAGCGGACAAAATAGAATGGTCGCGGCGCTTCCTGACTTGCAGCCAT
GCGCGACGTACTGTGTCCGGCTGGTGGCAGTTGACGAGGACGGGTTAGAG
AGTCCGCCAGGCCCGGAGATCTTCGTCGATACGCAAGCCGCCAACTGCAC
GCCCAAGCACAAAAAAGCATGTTGTATATGTTAAATGACTCCTGAAGTCT
TATTGCCACCCGAGGAGCCCCGCTTTGTAGCCGCGGAGGATACGTCGATA
AGAGTGGAGTGGGACGCTGTAGACACATTACGATACCGCATTCAGTATAA
AGAATACCTTCAAagttgggaggaggcggcgcaggTAGACGTTCCAAGCG
GACAAAATAGAATGGTCGCGGCGCTTCCTGACTTGCAGCCATGCGCGACG
TACTGTGTCCGGCTGGTGGCAGTTGACGAGGACGGGTTAGAGAGTCCGCC
AGGCCCGGAGATCTTCGTCGATACGCAAGCCGCCAACTGCACGCCCAAGC
ACAAAAAAGCATGTTGTATATGTTAA back to top
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