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Properties
Property Name | Value |
Product | homocysteine s-methyltransferase |
Orig transcript id | gnl|cribi|Naga_100017g12.327.mrna |
Orig protein id | gnl|cribi|Naga_100017g12.327 |
Gbkey | mRNA |
Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002456.1 | supercontig | CM002456.1:503059..505264 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna823 ID=rna823|Name=rna823|organism=Nannochloropsis gaditana|type=mRNA|length=2111bp CGGGCTTGAATGGGAATACATCACTTTTACGCGTTCTCGGGGCTATATCT CCTCTTTTCCAGGTATCTCTCAATCCAAATACACAAGTTATGTGGCAAAA TGGGCTTTCGCGTTGGAAAGCTCACGATTTAAGAGAGTCGAAGGAGCTGA AGCCAGAGTAAGGCGAGTAGCTTACATTGGTTAAAAAGGTGCCACTCTTG TCAATTGAGATGCGCGATGAATCATCACACAACCCTTTAGCTGCCATGCT GGCCCATCAAAATTGCATCATTAGTGATGGGGGCATGGGCACGCTTCTGG AGGCCTACATCGGTGCACCCTTGGATTCTAAATTGTGGTCGGCGGGGTGT TTGCGCACCCACCCTTCAGCCATCAAAGCCGTGCATAGGCAATACTTCGA AGCTGGTGCGGACATAGCAACAGCGGCGACGTACCAGGCCAGCTTGGAGG GGTTCATGAGCTCAGCAGGTGTCCGTGTCACCCGAGCGCAAGCCGAGGAT TTGATCCGTAAAGGAGTGGCACTGGCAATTGAGGCCCGTGACGAATTTTG GGCGGCGTATTCACGTGAAGAAGCAGGGAAAAGGAAGACCGAGGAGGCGG GGGGAGGGACACGGCAACGGCCATTGGTGGCGGCCAGCGTGGGGTGCTAC GGAGCGGCCCAAGCCGATGGCTCCGAATATCGTGGAGCATACGGCTTGAC GGTGGAAGAGGTGAGTCGAGAGATTGTCCCTGCCTTGGACGTGCTTTTGC CAAGTCGCACCAGCTCACCTTGTATGCGTCCTCATGCCCCCTTCTGCAGC TCACCTTGTATGCGTCCTCATGTCCCCCTTCTGCAGCTCACCTTGTATGC GTCCTCATGCCCCCTTCTGCAGCTCACCTTGTATGCGTCCTCATGCCCCC TTCTGCAGCTCACCTTGTATGCGTCCTCATGCCCCCTTCTGCAGCTCACC TTGTATGCGTCCTCATGCCCCCTTCTGCAGCTCACCTTGTATGCGTCCTC ATGCCCCCTTCTGCAGCTCACCTTGTATGCGTCCTCATGCCCCAATCTGC AGCTCACCCTGTATGCGTCCTCATGTCCCCTCCTGCAGCTGATGGACTGG CACCGTCCCCGCCTTGCAATCCTGGGTGAAACAGACGCTGACTTACTGGC CTTCGAGACGATCCCTTGCCAAGCTGAGGTGGTCGCGATCCTGCAACTCC TTCGGGAAGGACGGGAACAGGAAGGCTCAGCTCCCACCTCGAGACGCACT CCCTGCTGGATTACCCTGGCTTGCCAAGACGCCACCCATCTCAACAGCGG CGAGTCCCTAGTAAGCTGTGTGCAGCTCGTGAAGGCGCTGGATACGGGTT CACGGCCCCAAGTAGTGGGGTTAGGAGTGAATTGCTGCGCGCCTCAGCAT GTGGAGGGGGCCCTTACGGTGCTACGGGAAGGCTTACTGACCATTTCCGC CGCGAAAGAGGTCATTAGCGCAGCGAAAGGAAGTGAACGCATCCTTATCG CATACCCGAATTCAGGAGAGGTGTGGCAAGACAAGAGGTGGCTTCCGGGG ACGGGAGTGTGCCCCTCTTCGCGAGATTTTGCCGACTTGGCTCGTAAATG GGTGGTGGCGGGCGCCCGCGTTCTGGGGGGATGCTGCAGAACCACGCCCG AAACTATAAAAGCCTTACGAGCGTGCTTGCTAGCGAAGTAGAATTCATTC TGATTGTTGAAATTGCATGAGTTTTATTGCCAAACGGACGCTTTGTGAGG GATGGAAATGGCCTGAGTCGAAGTAGGGGGAAAAAGGAGGGATGAATTCA TTCTGATTGTTGAAATTGCATGAGTTTTATTGCCAAACGGACGCTTTGTG AGGGATGGAAATGGCCTGAGTCGAAGTAGGGGGAAAAAGGAGGAATGAAT TCATTCTGATTGTTTAAATTGCATGCGTTTAATAGCCAAACGGACACTTT GTGAGGGATGGAAATAGCCTGAATTAGGGTTAAATTGAAAGTCTCAAAAC AGTGAACAACTTTAAAATTTGGGGCCTTTCTATACTACTCGAGTCTTTAA AATGGATTGTTCAAAGTAACTTTTTTTCTTCTAAAGAAAAATCACTTCGA AAGCGTTTTTC back to topprotein sequence of rna823 >rna823-protein ID=rna823-protein|Name=rna823|organism=Nannochloropsis gaditana|type=polypeptide|length=285bp MSSAGVRVTRAQAEDLIRKGVALAIEARDEFWAAYSREEAGKRKTEEAGG GTRQRPLVAASVGCYGAAQADGSEYRGAYGLTVEELMDWHRPRLAILGET DADLLAFETIPCQAEVVAILQLLREGREQEGSAPTSRRTPCWITLACQDA THLNSGESLVSCVQLVKALDTGSRPQVVGLGVNCCAPQHVEGALTVLREG LLTISAAKEVISAAKGSERILIAYPNSGEVWQDKRWLPGTGVCPSSRDFA DLARKWVVAGARVLGGCCRTTPETIKALRACLLAK back to topmRNA from alignment at CM002456.1:503059..505264- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna823 ID=rna823|Name=rna823|organism=Nannochloropsis gaditana|type=mRNA|length=2206bp|location=Sequence derived from alignment at CM002456.1:503059..505264- (Nannochloropsis gaditana) CGGGCTTGAATGGGAATACATCACTTTTACGCGTTCTCGGGGCTATATCT
CCTCTTTTCCAGGTATCTCTCAATCCAAATACACAAGTTATGTGGCAAAA
TGGGCTTTCGCGTTGGAAAGCTCACGATTTAAGAGAGTCGAAGGAGCTGA
AGCCAGAGTAAGGCGAGTAGCTTACATTGGTTAAAAAGGTGCCACTCTTG
TCAATTGAGATGCGCGATGAATCATCACACAACCCTTTAGCTGCCATGCT
GGCCCATCAAAATTGCATCATTAGTGATGGGGGCATGGGCACGCTTCTGG
AGGCCTACATCGGTGCACCCTTGGATTCTAAATTGTGGTGAGTTATCACA
TCCCATGTCGCAGTCGTAGAAAGCCTTCAAGCACGCACATTCCCCAGAAA
TTGTTTTCTACCACGCTGTGGCTTATTCACAGGTCGGCGGGGTGTTTGCG
CACCCACCCTTCAGCCATCAAAGCCGTGCATAGGCAATACTTCGAAGCTG
GTGCGGACATAGCAACAGCGGCGACGTACCAGGCCAGCTTGGAGGGGTTC
ATGAGCTCAGCAGGTGTCCGTGTCACCCGAGCGCAAGCCGAGGATTTGAT
CCGTAAAGGAGTGGCACTGGCAATTGAGGCCCGTGACGAATTTTGGGCGG
CGTATTCACGTGAAGAAGCAGGGAAAAGGAAGACCGAGGAGGCGGGGGGA
GGGACACGGCAACGGCCATTGGTGGCGGCCAGCGTGGGGTGCTACGGAGC
GGCCCAAGCCGATGGCTCCGAATATCGTGGAGCATACGGCTTGACGGTGG
AAGAGGTGAGTCGAGAGATTGTCCCTGCCTTGGACGTGCTTTTGCCAAGT
CGCACCAGCTCACCTTGTATGCGTCCTCATGCCCCCTTCTGCAGCTCACC
TTGTATGCGTCCTCATGTCCCCCTTCTGCAGCTCACCTTGTATGCGTCCT
CATGCCCCCTTCTGCAGCTCACCTTGTATGCGTCCTCATGCCCCCTTCTG
CAGCTCACCTTGTATGCGTCCTCATGCCCCCTTCTGCAGCTCACCTTGTA
TGCGTCCTCATGCCCCCTTCTGCAGCTCACCTTGTATGCGTCCTCATGCC
CCCTTCTGCAGCTCACCTTGTATGCGTCCTCATGCCCCAATCTGCAGCTC
ACCCTGTATGCGTCCTCATGTCCCCTCCTGCAGCTGATGGACTGGCACCG
TCCCCGCCTTGCAATCCTGGGTGAAACAGACGCTGACTTACTGGCCTTCG
AGACGATCCCTTGCCAAGCTGAGGTGGTCGCGATCCTGCAACTCCTTCGG
GAAGGACGGGAACAGGAAGGCTCAGCTCCCACCTCGAGACGCACTCCCTG
CTGGATTACCCTGGCTTGCCAAGACGCCACCCATCTCAACAGCGGCGAGT
CCCTAGTAAGCTGTGTGCAGCTCGTGAAGGCGCTGGATACGGGTTCACGG
CCCCAAGTAGTGGGGTTAGGAGTGAATTGCTGCGCGCCTCAGCATGTGGA
GGGGGCCCTTACGGTGCTACGGGAAGGCTTACTGACCATTTCCGCCGCGA
AAGAGGTCATTAGCGCAGCGAAAGGAAGTGAACGCATCCTTATCGCATAC
CCGAATTCAGGAGAGGTGTGGCAAGACAAGAGGTGGCTTCCGGGGACGGG
AGTGTGCCCCTCTTCGCGAGATTTTGCCGACTTGGCTCGTAAATGGGTGG
TGGCGGGCGCCCGCGTTCTGGGGGGATGCTGCAGAACCACGCCCGAAACT
ATAAAAGCCTTACGAGCGTGCTTGCTAGCGAAGTAGAATTCATTCTGATT
GTTGAAATTGCATGAGTTTTATTGCCAAACGGACGCTTTGTGAGGGATGG
AAATGGCCTGAGTCGAAGTAGGGGGAAAAAGGAGGGATGAATTCATTCTG
ATTGTTGAAATTGCATGAGTTTTATTGCCAAACGGACGCTTTGTGAGGGA
TGGAAATGGCCTGAGTCGAAGTAGGGGGAAAAAGGAGGAATGAATTCATT
CTGATTGTTTAAATTGCATGCGTTTAATAGCCAAACGGACACTTTGTGAG
GGATGGAAATAGCCTGAATTAGGGTTAAATTGAAAGTCTCAAAACAGTGA
ACAACTTTAAAATTTGGGGCCTTTCTATACTACTCGAGTCTTTAAAATGG
ATTGTTCAAAGTAACTTTTTTTCTTCTAAAGAAAAATCACTTCGAAAGCG
TTTTTC back to topCoding sequence (CDS) from alignment at CM002456.1:503059..505264- >rna823 ID=rna823|Name=rna823|organism=Nannochloropsis gaditana|type=CDS|length=1716bp|location=Sequence derived from alignment at CM002456.1:503059..505264- (Nannochloropsis gaditana) CTGATGGACTGGCACCGTCCCCGCCTTGCAATCCTGGGTGAAACAGACGC TGACTTACTGGCCTTCGAGACGATCCCTTGCCAAGCTGAGGTGGTCGCGA TCCTGCAACTCCTTCGGGAAGGACGGGAACAGGAAGGCTCAGCTCCCACC TCGAGACGCACTCCCTGCTGGATTACCCTGGCTTGCCAAGACGCCACCCA TCTCAACAGCGGCGAGTCCCTAGTAAGCTGTGTGCAGCTCGTGAAGGCGC TGGATACGGGTTCACGGCCCCAAGTAGTGGGGTTAGGAGTGAATTGCTGC GCGCCTCAGCATGTGGAGGGGGCCCTTACGGTGCTACGGGAAGGCTTACT GACCATTTCCGCCGCGAAAGAGGTCATTAGCGCAGCGAAAGGAAGTGAAC GCATCCTTATCGCATACCCGAATTCAGGAGAGGTGTGGCAAGACAAGAGG TGGCTTCCGGGGACGGGAGTGTGCCCCTCTTCGCGAGATTTTGCCGACTT GGCTCGTAAATGGGTGGTGGCGGGCGCCCGCGTTCTGGGGGGATGCTGCA GAACCACGCCCGAAACTATAAAAGCCTTACGAGCGTGCTTGCTAGCGAAG TAGATGAGCTCAGCAGGTGTCCGTGTCACCCGAGCGCAAGCCGAGGATTT GATCCGTAAAGGAGTGGCACTGGCAATTGAGGCCCGTGACGAATTTTGGG CGGCGTATTCACGTGAAGAAGCAGGGAAAAGGAAGACCGAGGAGGCGGGG GGAGGGACACGGCAACGGCCATTGGTGGCGGCCAGCGTGGGGTGCTACGG AGCGGCCCAAGCCGATGGCTCCGAATATCGTGGAGCATACGGCTTGACGG TGGAAGAGCTGATGGACTGGCACCGTCCCCGCCTTGCAATCCTGGGTGAA ACAGACGCTGACTTACTGGCCTTCGAGACGATCCCTTGCCAAGCTGAGGT GGTCGCGATCCTGCAACTCCTTCGGGAAGGACGGGAACAGGAAGGCTCAG CTCCCACCTCGAGACGCACTCCCTGCTGGATTACCCTGGCTTGCCAAGAC GCCACCCATCTCAACAGCGGCGAGTCCCTAGTAAGCTGTGTGCAGCTCGT GAAGGCGCTGGATACGGGTTCACGGCCCCAAGTAGTGGGGTTAGGAGTGA ATTGCTGCGCGCCTCAGCATGTGGAGGGGGCCCTTACGGTGCTACGGGAA GGCTTACTGACCATTTCCGCCGCGAAAGAGGTCATTAGCGCAGCGAAAGG AAGTGAACGCATCCTTATCGCATACCCGAATTCAGGAGAGGTGTGGCAAG ACAAGAGGTGGCTTCCGGGGACGGGAGTGTGCCCCTCTTCGCGAGATTTT GCCGACTTGGCTCGTAAATGGGTGGTGGCGGGCGCCCGCGTTCTGGGGGG ATGCTGCAGAACCACGCCCGAAACTATAAAAGCCTTACGAGCGTGCTTGC TAGCGAAGTAGATGAGCTCAGCAGGTGTCCGTGTCACCCGAGCGCAAGCC GAGGATTTGATCCGTAAAGGAGTGGCACTGGCAATTGAGGCCCGTGACGA ATTTTGGGCGGCGTATTCACGTGAAGAAGCAGGGAAAAGGAAGACCGAGG AGGCGGGGGGAGGGACACGGCAACGGCCATTGGTGGCGGCCAGCGTGGGG TGCTACGGAGCGGCCCAAGCCGATGGCTCCGAATATCGTGGAGCATACGG CTTGACGGTGGAAGAG back to top
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