rna8224, rna8224 (mRNA) Nannochloropsis gaditana

Overview
Namerna8224
Unique Namerna8224
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1718
Alignment locationKK037248.1:123897..124408 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g36.3475.mrna
Orig protein idgnl|cribi|Naga_100011g36.3475
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:123897..124408 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100011g36gene7966Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8224rna8224-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22475.1cds8200Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8224 ID=rna8224|Name=rna8224|organism=Nannochloropsis gaditana|type=mRNA|length=1718bp
TCGAGATCAAATTAGCAATAGCACAGGGGTGGCGATGAGATAAGAAATTT
CCAGGAAGCATTTCACTGTATATTATATATACAAGCTCCCCCGGAAATCG
GCCGTACAACGATGGGGCATCTAAGTCCGACGAAAATGATGTCAATGGAA
CCACGTCGCATCTCATTTGCACACCCAGTCGGAAGAAATTGGCGTACTTT
CAATGAAAGGTTATGTTCAGCCTCAAAAGGCGTGACAATTTGATGTAGTA
GAAGTGCGCTATCCCTTTTTTTCAGAAATTGAAGAAGATGGCCGGGATGG
GGGGGGAAAGGAATAAAAAAATACTAGATTGTTGTTCTCTCTCGAATTGG
CCGCATGAGAGCGTACTACGCCTCGATCATCCGTAGAGCCTCTTAGTCGT
TACTTGTGAATAAGTAATAATGCTGCTTTGAAGCAAACTAATTCTATAAG
TGATATACGCTTGAGAAGTTTGTTTTGGATCTAGAATGTATGGTTTACGA
ACACATGCAGCGGGACAGAACTTAGCGGGAAAAGATACTCCCCCAGCTTG
CCGCGAGCTAATACACGTACTCATATCCCAACACTTTTCTTCTGGGACGG
TTGTAATATGGCGACATTGCAGACCATGCGGTATCGGTACACATATGGTA
GAGGTCTCCACATTAATTTAGGAGCTTGGTGGACTGCACTCGCTTGGGTG
ACTTGTGGCCTGTCCTGGGCGTTCATGCTTCCCCCCCAAGGAAAACCGCT
GCGAGTACGTTGTACCTTGTGTACGACATTTGCTCGGGTAGCTTCCACTA
GGAATAATCCAGACTCGCTGGTGACTTCACAGTCGACTTTGACGCTTGCT
GCTGAGCTTCGCGAGGAGCTTTTGTCATTGGTTAATATCCCACCAGAAAT
AAAAGAGGACAGATATGAAGCTATTGCACAGCGGATCGATTTCGTCGTGG
GTCAGCTGAAAGAGACATATGTGCCTCCACAGACCCTTCCGTTCATGAAT
CTACTATTGCAAGGATGTTGGTTAAATATTTACAATTCCTGGACTGTGCG
AAGGAGCGTCTGGGAAAAGCGTGACAGTTCGATGGATGCGGAGGAAGAGG
AGGACGAGGACGACTTCTTGGACCTGCTCGGTCCTGTTGAAGAAGATGAT
GTAGCAGCTGGCGCGAATAAGAGACCTTTGCATCTTCCGACACCCACACA
AGTGATAGTCCGCGACATTCATCAGACCCTTTCACCCAACCTGACTAAAG
GGGCGGTTGTCAATTCGGTAGACTGGGAGTGCACGGCTGGCGAAGACGGG
GACAAGGGCTTGACGGGGACGTTGACAGTGCGTGGAGGCTACGAGGTGAA
CAGCAGAGGTACTTTGGAAGTAGGTGGTGTGGAGCATGACTTGACGATGT
TGCGGGCCCCGCGGCATGCTGACGCGCTCATCAAAGCACTGCAGCGGGCT
GTCCCCTTCGACGTCTTCGACATGAACGGGACGTTCGTGGAGACGGCATT
CTTGGACCACGAGCTCCGCGTCACACAGACTCACAGCACGCGCTTTGGCA
CAATAACGAGCCTGTACAGGCGCAACCATACAAATTAGCGAGCGAACACA
GAGGCATAAGTGTGACAAGTTGAGAACGGCACAAAGAAAGTAGAGTATGT
GTATAACGGACTGAATTCCTTTCTCATTTTTGCCCTCATTTTCACCCAAA
TTAACAAGCAACAATCCG
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protein sequence of rna8224

>rna8224-protein ID=rna8224-protein|Name=rna8224|organism=Nannochloropsis gaditana|type=polypeptide|length=143bp
MSTCISSRQAGGVSFPAKFCPAACVRKPYILDPKQTSQAYITYRISLLQS
SIITYSQYFFIPFPPHPGHLLQFLKKRDSALLLHQIVTPFEAEHNLSLKV
RQFLPTGCANEMRRGSIDIIFVGLRCPIVVRPISGGACIYNIQ
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mRNA from alignment at KK037248.1:123897..124408+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8224 ID=rna8224|Name=rna8224|organism=Nannochloropsis gaditana|type=mRNA|length=512bp|location=Sequence derived from alignment at KK037248.1:123897..124408+ (Nannochloropsis gaditana)
ATGAGTACGTGTATTAGCTCGCGGCAAGCTGGGGGAGTATCTTTTCCCGC
TAAGTTCTGTCCCGCTGCATGTGTTCGTAAACCATACATTCTAGATCCAA
AACAAACTTCTCAAGCGTATATCACTTATAGAATTAGTTTGCTTCAAAGC
AGCATTATTACTTATTCACAAGTAACGACTAAGAGGCTCTACGGATGATC
GAGGCGTAGTACGCTCTCATGCGGCCAATTCGAGAGAGAACAACAATCTA
GTATTTTTttattcctttccccccccatcccggCCATCTTCTTCAATTTC
TGAAAAAAAGGGATAGCGCACTTCTACTACATCAAATTGTCACGCCTTTT
GAGGCTGAACATAACCTTTCATTGAAAGTACGCCAATTTCTTCCGACTGG
GTGTGCAAATGAGATGCGACGTGGTTCCATTGACATCATTTTCGTCGGAC
TTAGATGCCCCATCGTTGTACGGCCGATTTCCGGGGGAGCTTGTATATAT
AATATACAGTGA
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Coding sequence (CDS) from alignment at KK037248.1:123897..124408+

>rna8224 ID=rna8224|Name=rna8224|organism=Nannochloropsis gaditana|type=CDS|length=864bp|location=Sequence derived from alignment at KK037248.1:123897..124408+ (Nannochloropsis gaditana)
ATGAGTACGTGTATTAGCTCGCGGCAAGCTGGGGGAGTATCTTTTCCCGC
TAAGTTCTGTCCCGCTGCATGTGTTCGTAAACCATACATTCTAGATCCAA
AACAAACTTCTCAAGCGTATATCACTTATAGAATTAGTTTGCTTCAAAGC
AGCATTATTACTTATTCACAATATTTTTttattcctttccccccccatcc
cggCCATCTTCTTCAATTTCTGAAAAAAAGGGATAGCGCACTTCTACTAC
ATCAAATTGTCACGCCTTTTGAGGCTGAACATAACCTTTCATTGAAAGTA
CGCCAATTTCTTCCGACTGGGTGTGCAAATGAGATGCGACGTGGTTCCAT
TGACATCATTTTCGTCGGACTTAGATGCCCCATCGTTGTACGGCCGATTT
CCGGGGGAGCTTGTATATATAATATACAGTGAATGAGTACGTGTATTAGC
TCGCGGCAAGCTGGGGGAGTATCTTTTCCCGCTAAGTTCTGTCCCGCTGC
ATGTGTTCGTAAACCATACATTCTAGATCCAAAACAAACTTCTCAAGCGT
ATATCACTTATAGAATTAGTTTGCTTCAAAGCAGCATTATTACTTATTCA
CAATATTTTTttattcctttccccccccatcccggCCATCTTCTTCAATT
TCTGAAAAAAAGGGATAGCGCACTTCTACTACATCAAATTGTCACGCCTT
TTGAGGCTGAACATAACCTTTCATTGAAAGTACGCCAATTTCTTCCGACT
GGGTGTGCAAATGAGATGCGACGTGGTTCCATTGACATCATTTTCGTCGG
ACTTAGATGCCCCATCGTTGTACGGCCGATTTCCGGGGGAGCTTGTATAT
ATAATATACAGTGA
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Synonyms
Publications