EWM22475.1, cds8200 (CDS) Nannochloropsis gaditana

Overview
NameEWM22475.1
Unique Namecds8200
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:123897..124067 +
Alignment locationKK037248.1:124148..124408 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22475.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g36.3475.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:123897..124067 +
KK037248.1supercontigKK037248.1:124148..124408 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22475.1 vs. NCBI_GenBank
Match: gi|585102981|gb|EWM22475.1| (hypothetical protein Naga_100011g36 [Nannochloropsis gaditana])

HSP 1 Score: 293.123 bits (749), Expect = 1.736e-100
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 
Query:    1 MSTCISSRQAGGVSFPAKFCPAACVRKPYILDPKQTSQAYITYRISLLQSSIITYSQYFFIPFPPHPGHLLQFLKKRDSALLLHQIVTPFEAEHNLSLKVRQFLPTGCANEMRRGSIDIIFVGLRCPIVVRPISGGACIYNIQ 143
            MSTCISSRQAGGVSFPAKFCPAACVRKPYILDPKQTSQAYITYRISLLQSSIITYSQYFFIPFPPHPGHLLQFLKKRDSALLLHQIVTPFEAEHNLSLKVRQFLPTGCANEMRRGSIDIIFVGLRCPIVVRPISGGACIYNIQ
Sbjct:    1 MSTCISSRQAGGVSFPAKFCPAACVRKPYILDPKQTSQAYITYRISLLQSSIITYSQYFFIPFPPHPGHLLQFLKKRDSALLLHQIVTPFEAEHNLSLKVRQFLPTGCANEMRRGSIDIIFVGLRCPIVVRPISGGACIYNIQ 143
The following BLAST results are available for this feature:
BLAST of EWM22475.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102981|gb|EWM22475.1|1.736e-100100.00hypothetical protein Naga_100011g36 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8224rna8224Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications