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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF602 |
| Orig transcript id | gnl|cribi|Naga_100011g30.3468.mrna |
| Orig protein id | gnl|cribi|Naga_100011g30.3468 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:106483..108090 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8217 ID=rna8217|Name=rna8217|organism=Nannochloropsis gaditana|type=mRNA|length=1689bp
TGGGAGGGTATGATCTCGAGGAAGAGCTGGCTAGGAGGGGGGTGGAACGC
CGCGAGGAGGGAGCAGCCAGAGGACAGGCTCTCGGTCGTGAAGCAAGGAG
TGGAGGCTGGACTTTACGCGCATTCCAGATTGTTTCCTCACTCGTCCTTG
TAATGTCTCTTCTTTGGACGACTTTCTGATGCTCAAAGGAATGGGGACGT
TGCCGAGCCCGAGTGGGGCACCCAAGGATACCATTTAGCCTCCTTAGCCG
CTCATTTCTTGTTGCCCTACCATGTCTTCCTGCTGGTGATACAAAACCTT
GACATCCTGATTTTTTTTTATCTGGAACACCACATGATACATGCACTTGA
TAGGATGGCACGATGCAGGGGTTCTGGTGCCAGCTTTATGCTATTGGTTC
TCCTGTTAGTGGAGGTCCTGCATGGAGTCTGCGTCCTGGCTTTTCAGCCT
GGCAGCAGCGGTCCGTTCGCACACGCGAACGGAGTTCATCACCGTCGATC
AACCCGATGCGCTAGTGAAGGCGATAAAGGAGAGACAAGAAGTGCATGTG
GTAGGGAAGAAGGGCAAACATCGCGCACAGTCTCGGCATGGGGTACTCTC
AAGACAAAGTTGAGCTTCGGGGTTGAAAATATGGGCAAGTTGACGTTTGG
GACCGGAGCTGCCATTGTGGCAGGGTTTGGAGCTCCGCAAACAGTGGACG
TCATAAAAGGCGTAAAAGAGGGTCGGAATGACGTAGGTACAGCGTTGCAA
AGAATAGTCCGCCCCCCCTCCGCCGAGGCTTTCAGCCTGAAGCCCTTCTC
TCGGCGGACTCTGAAGGAGAAGCTGGCCTCGGTGCCTTGCTTCCTGGTGT
GCAACCAGCAGGGTTCGCCCTACCTGGTGCCCCTGGAGACGGGCTTCGAC
GTAGGGGTGGTCTTCTTGGACCCGGCGGACGCGGAGGAAATGCTGCAGAG
CATGGTGCAGAACCCGCAGACGGCGGACGCGCGCGTGCTGGTGATGGGCC
TGGACAAGGGCTTGGAGCTGGTCCAGAGCGAGCCCCGCAGGAACGGGAAC
CACATGCTCGTCTTCCAGTTCTGTCCGAGCGTGCAGCAGCTGAAAAATGC
CAACGGCTTCCGCAAGGTGGGCTGGAAGGCGGTGCTGGACAAGCGCCCGG
ACAAGTGGCGCTTCGGCTTTAATCGGCAGGGGGTGCGGAACGCGGGGCTC
CCCGTCTTTTACTGCCCTGACCTGCGGATCGCGAAGGGCCGCGAGATGGT
CAAACCAGTCTTTTTCTCCATGGAGGACCTGTACTACGCCTGGGACAGGA
GCACGGCCGGCAAGCACGGGGCGGCCCCCGGGGAGGTGAAGACTCTGGAC
TTTCTCCGTGTCGTGGAGTGGATGCTCAATGAGCCCGAGCAGACGCGTCT
GGTTGGCTTCCACGCCAGCACTCAGGCGCAGGAGTACGTGGAGGCGCAGC
TCCGGGTCAAGGGCGGAAAGGCAAGGCCAATAAGGGCGAGCTGAGGAGGG
AGGAGGGGAAGGAGGGGGAGCCGCGTGGTGAGGAGCAGGGGGCAAGGCGG
GAGAGGGATTGAAATTTCGTAGGCACTCAGCGAGGCTCATAGAGAGCGCA
AAAGAAAATTAAATGCACCAGCGATCTGCGCGCTCTTGTTGCCCGAGGAA
CCCATCCACGAATAGAAGTAATATAATAATATAATATTC back to topprotein sequence of rna8217 >rna8217-protein ID=rna8217-protein|Name=rna8217|organism=Nannochloropsis gaditana|type=polypeptide|length=324bp
MGNDGGVLAMQRKFMRGLGNKMGEKPSEEVSKRFRALIRSRVCAVSSERL
RDPVVACELGHLYNKEAVLLALLEHTLNPAFAHIRGMKDLIACRFTINPN
WTDETAAQASAQEAWAANEAKGEGTNAGTMVGSFAEEGAVSKYICPVARV
EMNAKQPFVVIRSTGWVLSERALKEVGAASLQDEYGPFDSDDLIRLVPDE
EEETELRRRMNERRSKSKKEKKRKQRAEGSSEGGRLGEGPKSHEETQKAV
VKAAKLKVENGGKREGGMASSQVLGAPMGLQASSLAGEAQRAAEKEMASS
SAFASLFNNGDEKADKNRLFSVRR back to topmRNA from alignment at KK037248.1:106483..108090- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8217 ID=rna8217|Name=rna8217|organism=Nannochloropsis gaditana|type=mRNA|length=1608bp|location=Sequence derived from alignment at KK037248.1:106483..108090- (Nannochloropsis gaditana)
ATGCCACGGCTGGAGTAGGAGTAAGTAGACATAACAAGGCACACATCCAT
CAAATATGAAGAAAAAGAACACAGACCCCGATTTCAAGCTAGGTCTGCGT
GCGCACATGGCCCCTTAGATCAACTCATTGGCCCCCCGTAGTCCCCCCTC
GTGGGGGACGCACGCATGCAAGCCCACACAGTGTGCGCTTTCTATCTCGC
GATCCAGATCCTTACAGTCGTGACAATACTATTCTGTATCGCTTTATCCG
CTGTATTCATCCTCTCCTCTGGCCTATAGAGGGCTAGAAGGGCGAGTCAG
GGAGGAGCAGGAGCGGGCGGGGTTTCAGAAGCAGGGGCATCACCTGAAGG
CGATGCGGAGACAGTGCAATGATAGTGTTCTTGCTCTTTTTTGGGGGCAC
CAAAAAGTACACGTGATTCACAACACACGTCTGGGCGTATAATTAATGTA
CTTTTTATCCCTTTGCTTTGTCTAGCAGGTGATCCAGGCGTGTAGGCCGG
GCTCCCCTCGCAATCAAGTCAGTAGTAAGCTTGTCCTCTACAGGAATGGG
GAACGATGGGGGCGTCCTGGCCATGCAGCGCAAATTCATGCGCGGGCTCG
GTAATAAGATGGGAGAGAAACCGAGCGAGGAAGTGAGCAAGCGGTTTCGA
GCGCTGATTCGGAGTCGGGTGTGCGCCGTGTCTAGTGAGCGCCTCCGGGA
CCCTGTCGTGGCCTGCGAGCTCGGCCACCTGTACAACAAGGAAGCAGTCT
TGCTGGCGCTGCTTGAGCACACGCTCAATCCGGCCTTTGCGCACATCCGC
GGGATGAAGGACTTAATTGCCTGCCGGTTCACAATCAATCCGAACTGGAC
GGACGAGACCGCCGCACAGGCTTCGGCGCAGGAGGCCTGGGCCGCGAATG
AGGCGAAGGGGGAGGGCACCAACGCCGGCACCATGGTGGGATCTTTCGCG
GAAGAAGGCGCGGTATCTAAGTATATCTGCCCGGTGGCACGGGTGGAGAT
GAACGCGAAACAGCCTTTTGTCGTGATCAGGAGCACGGGGTGGGTGCTGA
GCGAGCGGGCGCTGAAGGAGGTGGGAGCGGCGAGCCTGCAGGACGAGTAC
GGGCCCTTTGACAGCGACGATCTCATCCGACTGGTGCCTGACGAGGAGGA
AGAGACGGAACTGCGGCGGCGAATGAATGAGCGTCGGAGCAAATCGAAGA
AGGAGAAGAAGCGGAAGCAGCGCGCGGAGGGCAGCAGTGAAGGGGGCAGG
CTGGGCGAGGGTCCTAAGTCGCACGAAGAGACGCAGAAGGCAGTAGTTAA
GGCGGCCAAATTGAAGGTGGAAAATGGCGGGAAGCGAGAGGGTGGGATGG
CGTCATCCCAGGTGCTGGGGGCGCCCATGGGCTTGCAAGCTTCTTCCCTA
GCGGGCGAAGCGCAGAGAGCAGCTGAGAAGGAGATGGCTTCGTCATCGGC
CTTCGCCTCTTTGTTCAACAACGGGGACGAGAAGGCAGATAAAAACCGCC
TCTTCAGCGTGAGGCGCTGAGGGAGACTTGTAATGACATGTCTGAAAGGA
ATATAGAATATTATATTATTATATTACTTCTATTCGTGGATGGGTTCCTC
GGGCAACA back to topCoding sequence (CDS) from alignment at KK037248.1:106483..108090- >rna8217 ID=rna8217|Name=rna8217|organism=Nannochloropsis gaditana|type=CDS|length=975bp|location=Sequence derived from alignment at KK037248.1:106483..108090- (Nannochloropsis gaditana)
ATGGGGAACGATGGGGGCGTCCTGGCCATGCAGCGCAAATTCATGCGCGG
GCTCGGTAATAAGATGGGAGAGAAACCGAGCGAGGAAGTGAGCAAGCGGT
TTCGAGCGCTGATTCGGAGTCGGGTGTGCGCCGTGTCTAGTGAGCGCCTC
CGGGACCCTGTCGTGGCCTGCGAGCTCGGCCACCTGTACAACAAGGAAGC
AGTCTTGCTGGCGCTGCTTGAGCACACGCTCAATCCGGCCTTTGCGCACA
TCCGCGGGATGAAGGACTTAATTGCCTGCCGGTTCACAATCAATCCGAAC
TGGACGGACGAGACCGCCGCACAGGCTTCGGCGCAGGAGGCCTGGGCCGC
GAATGAGGCGAAGGGGGAGGGCACCAACGCCGGCACCATGGTGGGATCTT
TCGCGGAAGAAGGCGCGGTATCTAAGTATATCTGCCCGGTGGCACGGGTG
GAGATGAACGCGAAACAGCCTTTTGTCGTGATCAGGAGCACGGGGTGGGT
GCTGAGCGAGCGGGCGCTGAAGGAGGTGGGAGCGGCGAGCCTGCAGGACG
AGTACGGGCCCTTTGACAGCGACGATCTCATCCGACTGGTGCCTGACGAG
GAGGAAGAGACGGAACTGCGGCGGCGAATGAATGAGCGTCGGAGCAAATC
GAAGAAGGAGAAGAAGCGGAAGCAGCGCGCGGAGGGCAGCAGTGAAGGGG
GCAGGCTGGGCGAGGGTCCTAAGTCGCACGAAGAGACGCAGAAGGCAGTA
GTTAAGGCGGCCAAATTGAAGGTGGAAAATGGCGGGAAGCGAGAGGGTGG
GATGGCGTCATCCCAGGTGCTGGGGGCGCCCATGGGCTTGCAAGCTTCTT
CCCTAGCGGGCGAAGCGCAGAGAGCAGCTGAGAAGGAGATGGCTTCGTCA
TCGGCCTTCGCCTCTTTGTTCAACAACGGGGACGAGAAGGCAGATAAAAA
CCGCCTCTTCAGCGTGAGGCGCTGA back to top
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